X-Git-Url: http://git.kpe.io/?a=blobdiff_plain;f=data-structures.lisp;h=9fc75fffeeee6b6babd14da13f756bcb112b8937;hb=90dcc29376b4e52a1ba4b7b86dd19ce9f81be4c5;hp=36b874c7973fab89f922a6ea67b83b9a5ac88971;hpb=8e895602ced5ab847ecc36c1eaa7be1c9a872a22;p=umlisp.git diff --git a/data-structures.lisp b/data-structures.lisp index 36b874c..9fc75ff 100644 --- a/data-structures.lisp +++ b/data-structures.lisp @@ -20,27 +20,37 @@ ;;; Paths for files +(defparameter *release* "2006AD") + (defparameter *umls-path* - (make-pathname :directory '(:absolute "srv" "umls" "2006AC")) + (make-pathname :directory (list :absolute "srv" "umls" *release*)) "Path for base of UMLS data files") +(defparameter *meta-dir* + (make-pathname :directory '(:relative "META"))) + +(defparameter *lex-dir* + (make-pathname :directory '(:relative "LEX"))) + +(defparameter *net-dir* + (make-pathname :directory '(:relative "NET"))) + (defparameter *meta-path* - (merge-pathnames - (make-pathname :directory '(:relative "META")) - *umls-path*)) + (merge-pathnames *meta-dir* *umls-path*)) (defparameter *lex-path* - (merge-pathnames - (make-pathname :directory '(:relative "LEX")) - *umls-path*)) + (merge-pathnames *lex-dir* *umls-path*)) (defparameter *net-path* - (merge-pathnames - (make-pathname :directory '(:relative "NET")) - *umls-path*)) + (merge-pathnames *net-dir* *umls-path*)) (defun umls-path! (p) - (setq *umls-path* p)) + (setq *umls-path* (etypecase p + (string (parse-namestring p)) + (pathname p))) + (setq *meta-path* (merge-pathnames *meta-dir* *umls-path*)) + (setq *lex-path* (merge-pathnames *lex-dir* *umls-path*)) + (setq *net-path* (merge-pathnames *net-dir* *umls-path*))) ;;; Structures for parsing UMLS text files @@ -57,7 +67,7 @@ (defvar *octet-sql-storage* t "Used to deciding field lengths. Use nil if using UTF-8 database encoding. But, UTF-8 will cause MySQL to double the bytes used for fixed field sizes.") - + ;; Preliminary objects to replace structures (defclass ufile () @@ -73,7 +83,7 @@ (fields :initarg :fields :accessor fields) (ucols :initarg :ucols :accessor ucols)) (:default-initargs :fil nil :table nil :des nil :fmt nil :cls nil :rws nil :bts nil - :fields nil :ucols nil :subdir nil :dir nil) + :fields nil :ucols nil :subdir nil :dir nil) (:documentation "UMLS File")) (defclass ucol () @@ -91,8 +101,8 @@ (datatype :initarg :datatype :accessor datatype) (custom-value-fun :initarg :custom-value-fun :accessor custom-value-fun)) (:default-initargs :col nil :des nil :ref nil :min nil :av nil :max nil :fil nil - :sqltype nil :dty nil :parse-fun nil :datatype nil - :custom-value-fun nil) + :sqltype nil :dty nil :parse-fun nil :datatype nil + :custom-value-fun nil) (:documentation "UMLS column"))