X-Git-Url: http://git.kpe.io/?a=blobdiff_plain;f=doc%2Ftex2rtf%2Fctsim.tex;h=be33ab4fbdd32aa3b0f49dcf45a6a20ac9826b2a;hb=71faaba5bf4be59ef81fff71f2f3403a41c90b0f;hp=f6e893bca3709a3dce7d89f16b4e6a1585b4eebf;hpb=90ce7e809b3a9b06102cb94ba3f127cfe5aeab27;p=ctsim.git

diff --git a/doc/tex2rtf/ctsim.tex b/doc/tex2rtf/ctsim.tex
index f6e893b..be33ab4 100644
--- a/doc/tex2rtf/ctsim.tex
+++ b/doc/tex2rtf/ctsim.tex
@@ -3,8 +3,8 @@
 \usepackage{times}
 \usepackage{hyperref}
 
-\newcommand{\ctsim}{{\it CTSim}}
-\newcommand{\ctsimtext}{{\it CTSimText}}
+\newcommand{\ctsim}{{\tt CTSim}}
+\newcommand{\ctsimtext}{{\tt CTSimText}}
 
 \newcommand{\commandref}[2]{\helpref{{\tt $\backslash$#1}}{#2}}%
 \newcommand{\commandrefn}[2]{\helprefn{{\tt $\backslash$#1}}{#2}\index{#1}}%
@@ -19,7 +19,7 @@
 \date{January 2001}%
 }%
 \winhelponly{\title{Manual for CTSim 3.0}%
-\author{by Julian Smart\\$$\image{1cm;0cm}{tex2rtf.wmf}$$}%
+\author{by Kevin Rosenberg, M.D.\\$$\image{1cm;0cm}{logo-huge.bmp}$$}%
 }%
 \makeindex%
 \begin{document}%
@@ -69,7 +69,7 @@ collected around the phantom object.
 \setheader{{\it CHAPTER \thechapter}}{}{}{}{}{{\it CHAPTER \thechapter}}%
 \setfooter{\thepage}{}{}{}{}{\thepage}%
 
-\section{Download}%\index{Installation,Download}%
+\section{Download}\label{download}\index{Installation,Download}%
 
 The latest version of CTSim, plus source code, can be accessed from:
 
@@ -89,7 +89,6 @@ It is available in Windows 95/NT/2000 and Linux GUI versions and non-GUI version
 See the INSTALL file included in the source distribution for instructions.
 
 \section{Requirements}\index{Installation,Build,Requirements}%
-  \item Building CTSim
   \begin{itemize}\itemsep=0pt
   \item zlib Library (optional)
         \par Used for PNG file export.
@@ -109,14 +108,14 @@ See the INSTALL file included in the source distribution for instructions.
 	\par Used for debugging memory allocation
 	\par www.dmalloc.com
 
-  \item wxWindows library (optional) \par Used for
-  platform-independent graphical interface. The graphical-shell
-  program \ctsim requires this library.  \par www.wxwindows.org
+  \item wxWindows library (optional) 
+  \par Used for platform-independent graphical interface. The graphical-shell
+  program \ctsim requires this library.  
+  \par www.wxwindows.org
 
-  \end{itemize}
 \end{itemize}
 
-\chapter{ctsim - the Graphical User Interface}%\index{ctsim}% 
+\chapter{ctsim - the Graphical User Interface}\index{ctsim}% 
 \setheader{{\it CHAPTER \thechapter}}{}{}{}{}{{\it CHAPTER \thechapter}}%
 \setfooter{\thepage}{}{}{}{}{\thepage}%
 
@@ -144,7 +143,7 @@ offers a command-line to enter the function-names and their parameters. The outp
 
 The following function names are available:
 
-\subsection{if1}\index{Programs,ctsimtext,if1}%
+\subsection{if1}\label{if1}\index{Programs,ctsimtext,if1}%
 Perfoms math functions on a single image.
 
 \subsubsection{Usage}%
@@ -252,6 +251,8 @@ a rotation angle of 1 and for equilinear and equiangular geometries use a rotati
     Sets the distance of the radiation source and detectors from the center of the object as a ratio of the radius of the object. For parallel geometries, a value of 1.0 is fine. For other geometries, this should be at least 2.0 to avoid artifacts.
 \end{itemize}
 
+The Herman phantom is taken with permission from Gabor Hermans 1980 book\cite{HERMAN80}. The Shepp-Logan phantom was published in 1974\cite{SHEPP74}.
+
 \subsection{phm2if}\index{Programs,ctsimtext,phm2if}%
 Converts a geometric phantom object into an imagefile. The size of the
 imagefile in pixels must be specified as well as the number of samples
@@ -363,8 +364,13 @@ statistics as described by Herman\cite{HERMAN80}.
 
   \end{itemize}
 
-\bibliographystyle{abbrv}
-\bibliography{yes}
+\newpage
+
+\bibliographystyle{plain}
+\bibliography{ctsim}
+\addcontentsline{toc}{chapter}{Bibliography}
+\setheader{{\it REFERENCES}}{}{}{}{}{{\it REFERENCES}}%
+\setfooter{\thepage}{}{}{}{}{\thepage}%
 
 \addcontentsline{toc}{chapter}{Index}
 \setheader{{\it INDEX}}{}{}{}{}{{\it INDEX}}%