X-Git-Url: http://git.kpe.io/?a=blobdiff_plain;f=doc%2Ftex2rtf%2Fctsim.tex;h=e53446a6c7d31a965e93b35495e4ec154398ec3e;hb=516e7e87a069b938f325181d70c720c4c3fb8596;hp=5a3254816a4235250ce5903f8958d0d16322ca69;hpb=8e7866292e5cdfa2f2a65a237d97ec8eddb5398c;p=ctsim.git

diff --git a/doc/tex2rtf/ctsim.tex b/doc/tex2rtf/ctsim.tex
index 5a32548..e53446a 100644
--- a/doc/tex2rtf/ctsim.tex
+++ b/doc/tex2rtf/ctsim.tex
@@ -1,5 +1,11 @@
-\documentstyle[a4,makeidx,verbatim,texhelp,fancyhea,mysober,mytitle]{report}%
+\documentclass[11pt]{report}%
 %\input{psbox.tex}
+\usepackage{texhelp}
+\usepackage{fancyheadings}
+\usepackage{mysober}
+\usepackage{mytitle}
+\usepackage{verbatim}
+\usepackage{makeidx}
 \usepackage{times}
 \usepackage{hyperref}
 
@@ -71,6 +77,15 @@ collected around the phantom object.
 
 The \ctsim package has two executable files: the graphical \helprefn{ctsim}{ctsim} and text \helprefn{ctsimtext}{ctsimtext} programs.
 
+\chapter{Concepts}\index{Concepts}%
+\setheader{{\it CHAPTER \thechapter}}{}{}{}{}{{\it CHAPTER \thechapter}}%
+\setfooter{\thepage}{}{}{}{}{\thepage}%
+
+\section{Overview}\label{conceptoverview}\index{Concepts,Overview}%
+\section{Phantoms}\label{conceptphantom}\index{Concepts,Phantoms}%
+\section{Scanner}\label{conceptscanner}\index{Concepts,Scanner}%
+\section{Reconstruction}\label{conceptreconstruction}\index{Concepts,Reconstruction}%
+
 \chapter{Installation}\index{Installation}%
 \setheader{{\it CHAPTER \thechapter}}{}{}{}{}{{\it CHAPTER \thechapter}}%
 \setfooter{\thepage}{}{}{}{}{\thepage}%
@@ -275,6 +290,7 @@ Convert a projection file into an imagefile.
 
 \usage
 \begin{itemize}\itemsep=0pt
+\item --help    Print brief online help
 \end{itemize}
 
 \section{pjinfo}\label{pjinfo}\index{ctsimtext,pjinfo}%
@@ -295,30 +311,35 @@ Reconstructs the interior of an object from a projection file.
 \usage
 \begin{twocollist}
 \twocolitemruled{{\bf Parameter}}{{\bf Options}}
-\twocolitem{{\bf --filter}}{Selects which filter to apply to each projection. To properly reconstruct an image, this filter should be multiplied 
+\twocolitem{{\bf --filter}}
+{Selects which filter to apply to each projection. To properly reconstruct an image, this filter should be multiplied 
 by the absolute value of distance from zero frequency.
-  \begin{itemize}\itemsep=0pt
-    \item abs_bandlimit
-    \item abs_cosine
-    \item abs_hamming
-  \end{itemize}}
-  \twocolitem{{\bf --filter-parameter}}{Sets the alpha level for Hamming
+\begin{itemize}\itemsep=0pt
+\item abs\_bandlimit
+\item abs\_cosine
+\item abs\_hamming
+\end{itemize}
+}
+\twocolitem{{\bf --filter-parameter}}{Sets the alpha level for Hamming
   window. At setting of 0.54, this equals the Hanning window.}
-  \twocolitem{{\bf --filter-method}}{Selects the filtering method. For large numbers of detectors, {\tt rfftw} is optimal. For smaller numbers of detectors, {\tt convolution} might be a bit faster. 
+
+\twocolitem{{\bf --filter-method}}{Selects the filtering method. For large numbers of detectors, {\tt rfftw} is optimal. For smaller numbers of detectors, {\tt convolution} might be a bit faster. 
 \begin{itemize}\itemsep=0pt
 \item convolution
-      \item fourier
-      \item fourier_table
-      \item fftw
-      \item rfftw
-\end{itemize}}
-  \twocolitem{{\bf --filter-generation}}{Selects the filter generation. With convolution, {\tt direct} is the proper method to select. With any of the frequency methods, {\tt inverse-fourier} is the best method.
+\item fourier
+\item fourier\_table
+\item fftw
+\item rfftw
+\end{itemize}
+}
+
+\twocolitem{{\bf --filter-generation}}{Selects the filter generation. With convolution, {\tt direct} is the proper method to select. With any of the frequency methods, {\tt inverse-fourier} is the best method.
 \begin{itemize}\itemsep=0pt
 \item direct
-      \item inverse-fourier
+\item inverse-fourier
 \end{itemize}
 }
-  \twocolitem{{\bf --interpolation}}{Interpolation technique. {\tt linear} is optimal.
+\twocolitem{{\bf --interpolation}}{Interpolation technique. {\tt linear} is optimal.
 \begin{itemize}\itemsep=0pt
 \item nearest
 \item linear
@@ -336,7 +357,7 @@ by the absolute value of distance from zero frequency.
 }
 \twocolitem{{\bf --zeropad}}{ Zeropad factor. A setting of {\tt 1} is optimal.}
 
-  \twocolitem{{\bf --preinterpolate}}{Selects preinterpolation interpolation technique and sets the preinterpolation factor. Currently, this is experimental and does not work well.}
+\twocolitem{{\bf --preinterpolate}}{Selects preinterpolation interpolation technique and sets the preinterpolation factor. Currently, this is experimental and does not work well.}
 \end{twocollist}
 
 \chapter{The Web Browser CGI Interface}\label{webinterface}\index{Web Interface}%
@@ -369,9 +390,9 @@ statistics as described by Herman\cite{HERMAN80}.
 \setfooter{\thepage}{}{}{}{}{\thepage}%
 
 \addcontentsline{toc}{chapter}{Index}
-\setheader{{\it INDEX}}{}{}{}{}{{\it INDEX}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
-\printindex%
+\setheader{{\it INDEX}}{}{}{}{}{{\it INDEX}} %
+\setfooter{\thepage}{}{}{}{}{\thepage} %
+\printindex %
 
 \end{document}%