X-Git-Url: http://git.kpe.io/?a=blobdiff_plain;f=parse-2002.lisp;h=67a4e0274a80acff2b8b8993e88f430f8baf0946;hb=5a80d916816131a1d56a60790cd1e4b5e9c88810;hp=07f9b9cd3f992bfd73786511391c9631f0ae4712;hpb=3c41df30a47a0f5b9473801941c0e56d8e7d6cbd;p=umlisp.git diff --git a/parse-2002.lisp b/parse-2002.lisp index 07f9b9c..67a4e02 100644 --- a/parse-2002.lisp +++ b/parse-2002.lisp @@ -8,7 +8,7 @@ ;;;; Programmer: Kevin M. Rosenberg ;;;; Date Started: Apr 2000 ;;;; -;;;; $Id: parse-2002.lisp,v 1.3 2002/10/09 23:03:41 kevin Exp $ +;;;; $Id: parse-2002.lisp,v 1.4 2002/10/14 09:25:20 kevin Exp $ ;;;; ;;;; This file, part of UMLisp, is ;;;; Copyright (c) 2000-2002 by Kevin M. Rosenberg, M.D. @@ -51,9 +51,9 @@ (setq *parse-hash-init?* t)) (with-buffered-umls-file (line "MRCON") (let ((cui (parse-ui (aref line 0))) - (lui (parse-ui (nth 3 line))) - (sui (parse-ui (nth 5 line))) - (lrl (parse-integer (nth 7 line)))) + (lui (parse-ui (aref line 3))) + (sui (parse-ui (aref line 5))) + (lrl (parse-integer (aref line 7)))) (unless (gethash cui pfstr-hash) ;; if haven't stored pfstr for cui (if (and (string-equal (aref line 1) "ENG") ; LAT (string-equal (aref line 2) "P") ; ts @@ -63,9 +63,9 @@ (set-lrl-hash lui lrl lui-lrl-hash) (set-lrl-hash (make-cuisui cui sui) lrl cuisui-lrl-hash))) (with-buffered-umls-file (line "MRSO") - (let ((sab (aref 3 line))) + (let ((sab (aref line 3))) (unless (gethash sab sab-srl-hash) ;; if haven't stored - (setf (gethash sab sab-srl-hash) (aref 6 line)))))) + (setf (gethash sab sab-srl-hash) (aref line 6)))))) (defun init-hash-table (&optional (force-read nil)) (when (or force-read (not *parse-hash-init?*)) @@ -132,7 +132,7 @@ ;;; sql-l - Big integer (64-bit) ;;; sql-f - Floating point -(defconstant +col-datatypes+ +(defparameter +col-datatypes+ '(("AV" sql-f) ("BTS" sql-i) ("CLS" sql-i) ("COF" sql-i) ("CUI1" sql-u) ("CUI2" sql-u) ("CUI" sql-u) ("CXN" sql-s) ("FR" sql-i) ("LRL" sql-s) ("LUI" sql-u) ("MAX" sql-s) ("MIN" sql-s) ("RANK" sql-s) ("REF" sql-s) @@ -146,14 +146,14 @@ ("UI" sql-u) ("UI2" sql-u) ("UI3" sql-u)) "SQL data types for each non-string column") -(defconstant +custom-tables+ +(defparameter +custom-tables+ nil #+ignore '(("MRCONSO" "SELECT m.CUI, m.LAT, m.TS, m.LUI, m.STT, m.SUI, m.STR, m.LRL, s.SAB, s.TTY, s.SCD, s.SRL FROM MRCON m, MRSO s WHERE m.CUI=s.CUI AND m.LUI=s.LUI AND m.SUI=s.SUI") ("MRCONFULL" "SELECT m.CUI, m.LAT, m.TS, m.LUI, m.STT, m.SUI, m.STR, m.LRL, s.SAB, s.TTY, s.SCD, s.SRL, t.TUI FROM MRCON m, MRSO s, MRSTY t WHERE m.CUI=s.CUI AND m.LUI=s.LUI AND m.SUI=s.SUI AND m.CUI=t.CUI AND s.CUI=t.CUI")) "Custom tables to create") -(defconstant +custom-cols+ +(defparameter +custom-cols+ '(("MRCON" "KPFSTR" "TEXT" 1024 (lambda (x) (pfstr-hash (parse-ui (nth 0 x))))) ("MRCON" "KCUISUI" "BIGINT" 0 @@ -230,7 +230,7 @@ (lambda (x) (format nil "~d" (make-cuisui (parse-ui (nth 2 x)) (parse-ui (nth 4 x))))))) "Custom columns to create.(filename, col, sqltype, value-func).") -(defconstant +index-cols+ +(defparameter +index-cols+ '(("CUI" "MRATX") ("CUI1" "MRCOC") ("CUI" "MRCON") ("LUI" "MRCON") ("LRL" "MRCON") ("SUI" "MRCON") ("CUI" "MRCXT") ("CUI" "MRDEF") ("CUI" "MRLO") @@ -259,7 +259,7 @@ "Columns in files to index") -(defconstant +custom-index-cols+ +(defparameter +custom-index-cols+ nil #+ignore '(("CUI" "MRCONFULL") ("SAB" "MRCONFULL") ("TUI" "MRCONFULL"))