X-Git-Url: http://git.kpe.io/?a=blobdiff_plain;f=parse-2002.lisp;h=aa9c46a6c423dc0bfb00c7f5eea4b4601484f0b7;hb=aeade16272b79115d3f307906c7a3e9597137e97;hp=9e70e3c891c1a56c15bb1eeedbd4cd48c188a446;hpb=64a30d395eddce700cdacad5b025eb7f369a3ba2;p=umlisp.git

diff --git a/parse-2002.lisp b/parse-2002.lisp
index 9e70e3c..aa9c46a 100644
--- a/parse-2002.lisp
+++ b/parse-2002.lisp
@@ -2,16 +2,16 @@
 ;;;; *************************************************************************
 ;;;; FILE IDENTIFICATION
 ;;;;
-;;;; Name:          parse-2002.lisp
-;;;; Purpose:       Parsing and SQL insertion routines for UMLisp which may
-;;;;                change from year to year
-;;;; Author:        Kevin M. Rosenberg
-;;;; Date Started:  Apr 2000
+;;;; Name:     parse-2002.lisp
+;;;; Purpose:  Parsing and SQL insertion routines for UMLisp which may
+;;;;           change from year to year
+;;;; Author:   Kevin M. Rosenberg
+;;;; Created:  Apr 2000
 ;;;;
-;;;; $Id: parse-2002.lisp,v 1.11 2003/05/08 02:59:21 kevin Exp $
+;;;; $Id$
 ;;;;
 ;;;; This file, part of UMLisp, is
-;;;;    Copyright (c) 2000-2002 by Kevin M. Rosenberg, M.D.
+;;;;    Copyright (c) 2000-2004 by Kevin M. Rosenberg, M.D.
 ;;;;
 ;;;; UMLisp users are granted the rights to distribute and use this software
 ;;;; as governed by the terms of the GNU General Public License.
@@ -19,11 +19,8 @@
 
 (in-package #:umlisp)
 
-(eval-when (:compile-toplevel)
-  (declaim (optimize (speed 3) (safety 1) (compilation-speed 0) (debug 3))))
-
 ;;; Pre-read data for custom fields into hash tables
-(defvar *parse-hash-init?* nil)
+(defvar *preparse-hash-init?* nil)
 
 (eval-when (:compile-toplevel :load-toplevel :execute)
 (let ((pfstr-hash nil)      ;;; Preferred concept strings by CUI
@@ -32,7 +29,7 @@
       (cuisui-lrl-hash nil) ;;; LRL by CUISUI
       (sab-srl-hash nil))   ;;; SRL by SAB
   
-  (defun make-parse-hash-table ()
+  (defun make-preparse-hash-table ()
     (if pfstr-hash
 	(progn
 	  (clrhash pfstr-hash)
@@ -47,10 +44,10 @@
 	  cuisui-lrl-hash (make-hash-table :size 1800000)
 	  sab-srl-hash (make-hash-table :size 100 :test 'equal))))
     
-  (defun binit-hash-table (&optional (force-read nil))
-    (when (or force-read (not *parse-hash-init?*))
-      (make-parse-hash-table)
-      (setq *parse-hash-init?* t))
+  (defun buffered-ensure-preparse (&optional (force-read nil))
+    (when (or force-read (not *preparse-hash-init?*))
+      (make-preparse-hash-table)
+      (setq *preparse-hash-init?* t))
     (with-buffered-umls-file (line "MRCON")
       (let ((cui (parse-ui (aref line 0)))
 	    (lui (parse-ui (aref line 3)))
@@ -69,10 +66,10 @@
 	(unless (gethash sab sab-srl-hash)  ;; if haven't stored
 	  (setf (gethash sab sab-srl-hash) (aref line 6))))))
   
-  (defun init-hash-table (&optional (force-read nil))
-    (when (or force-read (not *parse-hash-init?*))
-      (make-parse-hash-table)
-      (setq *parse-hash-init?* t))
+  (defun ensure-preparse (&optional (force-read nil))
+    (when (or force-read (not *preparse-hash-init?*))
+      (make-preparse-hash-table)
+      (setq *preparse-hash-init?* t))
     (with-umls-file (line "MRCON")
       (let ((cui (parse-ui (nth 0 line)))
 	    (lui (parse-ui (nth 3 line)))
@@ -106,7 +103,7 @@
     (gethash cuisui cuisui-lrl-hash))
   
   (defun sab-srl (sab)
-    (kmrcl:aif (gethash sab sab-srl-hash) kmrcl::it 0))
+    (aif (gethash sab sab-srl-hash) it 0))
 )) ;; closure
 
 (defun set-lrl-hash (key lrl hash)
@@ -122,11 +119,12 @@
 ;;; sql-i - Integer (32-bit)
 ;;; sql-l - Big integer (64-bit)
 ;;; sql-f - Floating point
+;;; sql-c - Character data
 
 (defparameter +col-datatypes+
     '(("AV" sql-f) ("BTS" sql-i) ("CLS" sql-i) ("COF" sql-i) ("CUI1" sql-u)
       ("CUI2" sql-u) ("CUI" sql-u) ("CXN" sql-s) ("FR" sql-i) ("LRL" sql-s)
-      ("LUI" sql-u) ("MAX" sql-s) ("MIN" sql-s) ("RANK" sql-s) ("REF" sql-s)
+      ("LUI" sql-u) ("MAX" sql-s) ("MIN" sql-s) ("RANK" sql-s) ("REF" sql-c)
       ("RNK" sql-s) ("RWS" sql-i) ("SRL" sql-s) ("SUI" sql-u) ("TUI" sql-u)
       ;;; Custom columns
       ("KCUISUI" sql-l) ("KCUILUI" sql-l) ("KCUILRL" sql-i) ("KLUILRL" sql-i)
@@ -254,6 +252,7 @@
       ("VCUI" "MRSAB") ("LAT" "MRSAB"))
   "Columns in files to index")
 
+
 (defparameter +custom-index-cols+
   nil
   #+ignore