X-Git-Url: http://git.kpe.io/?a=blobdiff_plain;f=parse-rrf.lisp;h=84a4b4b168d114b1eaae3b70ec8549d2c8ac00e6;hb=2602e82650f294955a06228db3d4b6a872f1485c;hp=20e58b457e6516a950e1eeb1415a05dce4b959a6;hpb=3624cc56e888df9ff9398810dc2b404cb0a1ce79;p=umlisp.git

diff --git a/parse-rrf.lisp b/parse-rrf.lisp
index 20e58b4..84a4b4b 100644
--- a/parse-rrf.lisp
+++ b/parse-rrf.lisp
@@ -40,19 +40,20 @@
           (clrhash cuisui-lrl-hash)
           (clrhash sab-srl-hash))
       (setf
-	  pfstr-hash (make-hash-table :size 1300000)
-	  cui-lrl-hash (make-hash-table :size 1300000)
-	  lui-lrl-hash (make-hash-table :size 4600000)
-	  sui-lrl-hash (make-hash-table :size 5100000)
-	  cuisui-lrl-hash (make-hash-table :size 2000000)
-	  sab-srl-hash (make-hash-table :size 100 :test 'equal))))
+	  pfstr-hash (make-hash-table :size 1500000)
+	  cui-lrl-hash (make-hash-table :size 1500000)
+	  lui-lrl-hash (make-hash-table :size 5000000)
+	  sui-lrl-hash (make-hash-table :size 6000000)
+	  cuisui-lrl-hash (make-hash-table :size 6000000)
+	  sab-srl-hash (make-hash-table :size 200 :test 'equal))))
 
   (defun ensure-preparse (&optional (force-read nil))
     (when (and *preparse-hash-init?* (not force-read))
       (return-from ensure-preparse 'already-done))
     (make-preparse-hash-table)
     (let ((counter 0))
-      (declare (fixnum counter))
+      (declare (fixnum counter)
+               (ignorable counter))
       (with-umls-file (line "MRCONSO.RRF")
         (let ((cui (parse-ui (nth 0 line)))
               (lui (parse-ui (nth 3 line)))
@@ -220,12 +221,12 @@
       ("SUI" "MRCONSO") ("SAUI" "MRCONSO") ("CODE" "MRCONSO")
       ("SCUI" "MRCONSO")
       ("CUI" "MRDEF")
-      ("CUI1" "MRREL") ("CUI2" "MRREL")
+      ("CUI1" "MRREL") ("CUI2" "MRREL") ("SAB" "MRREL")
       ("RUI" "MRREL") ("AUI1" "MRREL") ("AUI2" "MRREL")
       ("CUI" "MRSAT") ("LUI" "MRSAT") ("SUI" "MRSAT")
       ("METAUI" "MRSAT") ("ATN" "MRSAT")
       ("CUI" "MRSTY")  ("TUI" "MRSTY") ("CUI" "MRXNS_ENG")
-      ("AUI" "MRHIER") ("PTR" "MRHIER" 255) ("CUI" "MRHIER") ("CXN" "MRHIER") ("RELA" "MRHIER") ("PAUI" "MRHIER")
+      ("AUI" "MRHIER") ("CUI" "MRHIER") ("CXN" "MRHIER") ("RELA" "MRHIER") ("PAUI" "MRHIER")
       ("SAB" "MRHIER")
       #+ignore ("NSTR" "MRXNS_ENG" 10)
       ("CUI" "MRXNW_ENG") ("NWD" "MRXNW_ENG") ("WD" "MRXW_ENG")
@@ -308,7 +309,7 @@
 
 
 (defun gen-ufiles-generic (files-filename dir)
-"Initialize all LEX file structures"
+"Initialize generic UMLS file structures"
   (let ((files '()))
     (with-umls-file (line files-filename)
       (destructuring-bind (fil des fmt cls rws bts) line