X-Git-Url: http://git.kpe.io/?a=blobdiff_plain;f=sql-classes.lisp;h=9efcd674240ae37e5326e6e0dbe73ab314ae215f;hb=f259a3855fe02d1d04111f351682028b46934270;hp=c33a34362c4fd7f730508f6e931fcd2667bcae65;hpb=31094d0b33bfd5cecceb2b77d5f51e4b78365b98;p=umlisp.git diff --git a/sql-classes.lisp b/sql-classes.lisp index c33a343..9efcd67 100644 --- a/sql-classes.lisp +++ b/sql-classes.lisp @@ -7,7 +7,7 @@ ;;;; Author: Kevin M. Rosenberg ;;;; Date Started: Apr 2000 ;;;; -;;;; $Id: sql-classes.lisp,v 1.19 2003/05/02 22:30:34 kevin Exp $ +;;;; $Id: sql-classes.lisp,v 1.44 2003/05/03 20:42:50 kevin Exp $ ;;;; ;;;; This file, part of UMLisp, is ;;;; Copyright (c) 2000-2002 by Kevin M. Rosenberg, M.D. @@ -26,73 +26,94 @@ (defun current-srl! (srl) (setq *current-srl* srl)) - (defmacro with-umlisp-query ((table fields srl where-name where-value &key (lrlname "KCUILRL") distinct single order like) &body body) - (let ((query (gensym))) + (if single + `(unless (and ,where-name (not ,where-value)) + (let ((tuple (car (umlisp-query ,table ,fields ,srl ,where-name ,where-value + :lrlname ,lrlname :single ,single + :distinct ,distinct :order ,order :like ,like)))) + (when tuple + (destructuring-bind ,fields tuple + ,@body)))) `(unless (and ,where-name (not ,where-value)) - (let ((,query (umlisp-query ,table ,fields ,srl ,where-name ,where-value - :lrlname ,lrlname :single ,single :distinct ,distinct - :order ,order :like ,like))) - (if ,single - (let ((tuple (car ,query))) - (when tuple - (destructuring-bind ,fields tuple - ,@body))) - (loop - for tuple in ,query collect - (destructuring-bind ,fields tuple - ,@body))))))) - -(defun umlisp-query (table fields srl where-name where-value + (loop for tuple in + (umlisp-query ,table ,fields ,srl ,where-name ,where-value + :lrlname ,lrlname :single ,single :distinct ,distinct :order ,order :like ,like) + collect (destructuring-bind ,fields tuple + ,@body))))) + +(defmacro umlisp-query (table fields srl where-name where-value &key (lrlname "KCUILRL") single distinct order like) "Query the UMLisp database. Return a list of umlisp objects whose name is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" - (when (or (not where-name) where-value) + `(when (or (not ,where-name) ,where-value) (mutex-sql-query - (query-string table fields srl where-name where-value - :lrlname lrlname :single single :distinct distinct :order order :like like)))) + (query-string-macro ,table ,fields ,srl ,where-name ,where-value + :lrlname ,lrlname :single ,single :distinct ,distinct :order ,order :like ,like)))) +(defmacro query-string-macro (table fields &optional srl where-name where-value + &key (lrlname "KCUILRL") single distinct order like) + (let* ((%%fields (format nil "select ~A~{~:@(~A~)~^,~} from ~:@(~A~)" + (if distinct "distinct " "") fields table)) + (%%order (if order (format nil " order by ~{~:@(~A~) ~(~A~)~^,~}" order) "")) + (%%lrl (format nil " and ~:@(~A~) <= ~~D" lrlname)) + (%%where (format nil " where ~:@(~A~)" where-name))) + `(concatenate + 'string + ,%%fields + ,@(when %%where (list %%where)) + (if (quote ,where-name) + (format nil (if (stringp ,where-value) + (if ,like " like '%~A%'" "='~A'") + "=~A") + ,where-value) + "") + (if ,srl (format nil ,%%lrl ,srl) "") + ,@(when %%order (list %%order)) + ,@(when single (list " limit 1"))))) + (defun query-string (table fields &optional srl where-name where-value &key (lrlname "KCUILRL") single distinct order like) - (let ((qs (format nil "select ~A~{~:@(~A~)~^,~} from ~:@(~A~)" - (if distinct "distinct " "") - fields table))) - (when where-name - (setq qs (concatenate 'string qs - (format nil - (if (stringp where-value) - (if like - " where ~A like '%~A%'" - " where ~A='~A'") - " where ~A=~A") - where-name where-value)))) - (when srl - (setq qs (concatenate 'string qs (format nil " and ~:@(~A~) <= ~D" - lrlname srl)))) - (when order - (setq qs (concatenate 'string qs - (format nil " order by ~{~:@(~A) ~A~^,~}" - (flatten - (loop for o in order - collect - (if (atom o) - (list o 'asc) - o))))))) - (when single - (setq qs (concatenate 'string qs " limit 1"))) - qs)) + (concatenate + 'string + (format nil "select ~A~{~:@(~A~)~^,~} from ~:@(~A~)" + (if distinct "distinct " "") fields table) + (if where-name + (format nil + (if (stringp where-value) + (if like + " where ~A like '%~A%'" + " where ~A='~A'") + " where ~A=~A") + where-name where-value) + "") + (if srl (format nil " and ~:@(~A~) <= ~D" lrlname srl) "") + (if order (format nil " order by ~{~:@(~A~) ~(~A~)~^,~}" order) "") + (if single " limit 1" ""))) (defun find-ucon-cui (cui &key (srl *current-srl*)) "Find ucon for a cui" - (with-umlisp-query ('mrcon (kpfstr kcuilrl) srl 'cui (parse-cui cui) :single t) + (with-umlisp-query (mrcon (kpfstr kcuilrl) srl cui (parse-cui cui) :single t) (make-instance 'ucon :cui (parse-cui cui) - :pfstr kpfstr2 + :pfstr kpfstr :lrl (ensure-integer kcuilrl)))) +(defun find-ucon-cui-old (cui &key (srl *current-srl*)) + "Find ucon for a cui" + (when (stringp cui) (setq cui (parse-cui cui))) + (when cui + (let ((ls (format nil "select KPFSTR,KCUILRL from MRCON where CUI=~d" cui))) + (when srl + (string-append ls (format nil " and KCUILRL <= ~d" srl))) + (string-append ls " limit 1") + (let ((tuple (car (mutex-sql-query ls)))) + (destructuring-bind (kpfstr kcuilrl) tuple + (make-instance 'ucon :cui cui :pfstr kpfstr + :lrl (ensure-integer kcuilrl))))))) (defun find-ucon-cui-sans-pfstr (cui &key (srl *current-srl*)) "Find ucon for a cui" @@ -111,14 +132,14 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" (with-umlisp-query ('mrcon (cui kpfstr kcuilrl) srl 'lui (parse-lui lui) :distinct t) (make-instance 'ucon :cui (ensure-integer cui) :pfstr kpfstr - :lrl (ensure-integer lrl)))) + :lrl (ensure-integer kcuilrl)))) (defun find-ucon-sui (sui &key (srl *current-srl*)) "Find list of ucon for sui" (with-umlisp-query ('mrcon (cui kpfstr kcuilrl) srl 'sui (parse-sui sui) :distinct t) (make-instance 'ucon :cui (ensure-integer cui) :pfstr kpfstr - :lrl (ensure-integer kcuilrl))))) + :lrl (ensure-integer kcuilrl)))) (defun find-ucon-cuisui (cui sui &key (srl *current-srl*)) "Find ucon for cui/sui" @@ -132,8 +153,7 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" (defun find-ucon-str (str &key (srl *current-srl*)) "Find ucon that are exact match for str" (with-umlisp-query ('mrcon (cui kpfstr kcuilrl) srl 'str str :distinct t) - (make-instance 'ucon :cui (ensure-integer cui) - :pfstr kpfstr + (make-instance 'ucon :cui (ensure-integer cui) :pfstr kpfstr :lrl (ensure-integer kcuilrl)))) (defun find-ucon-all (&key (srl *current-srl*)) @@ -145,7 +165,8 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" (make-instance 'ucon :cui (ensure-integer cui) :pfstr pfstr :lrl (ensure-integer cuilrl))) - (query-string 'mrcon '(cui kpfstr kcuilrl) srl nil nil :order '((cui asc)) :distinct t) + (query-string 'mrcon '(cui kpfstr kcuilrl) srl nil nil + :order '(cui asc) :distinct t) :database db))) (defun map-ucon-all (fn &key (srl *current-srl*)) @@ -158,7 +179,7 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" (make-instance 'ucon :cui (ensure-integer cui) :pfstr pfstr :lrl (ensure-integer cuilrl)))) - (query-string 'mrcon '(cui kpfstr kcuilrl) srl nil nil :order '((cui asc)) :distinct t) + (query-string 'mrcon '(cui kpfstr kcuilrl) srl nil nil :order '(cui asc) :distinct t) :database db))) @@ -187,7 +208,7 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" "Return a list of urel for cui2" (with-umlisp-query ('mrrel (rel cui1 rela sab sl mg kpfstr2) srl 'cui2 (parse-cui cui2) :lrlname "KSRL") (make-instance 'urel :cui2 (parse-cui cui2) :rel rel :cui1 (ensure-integer cui1) :rela rela - :sab sab :sl sl :mg mg :pfstr2 kpfstr2)))) + :sab sab :sl sl :mg mg :pfstr2 kpfstr2))) (defun find-ucon-rel-cui2 (cui2 &key (srl *current-srl*)) (mapcar @@ -197,7 +218,7 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" (defun find-ucoc-cui (cui &key (srl *current-srl*)) "Return a list of ucoc for cui" (with-umlisp-query ('mrcoc (cui2 soc cot cof coa kpfstr2) srl 'cui1 (parse-cui cui) - :lrlname "KSRL" :order '((cof asc))) + :lrlname "KSRL" :order '(cof asc)) (setq cui2 (ensure-integer cui2)) (when (zerop cui2) (setq cui2 nil)) (make-instance 'ucoc :cui1 (parse-cui cui) :cui2 (ensure-integer cui2) :soc soc :cot cot @@ -206,7 +227,7 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" (defun find-ucoc-cui2 (cui2 &key (srl *current-srl*)) "Return a list of ucoc for cui2" (with-umlisp-query ('mrcoc (cui1 soc cot cof coa kpfstr2) srl 'cui2 (parse-cui cui2) - :lrlname "KSRL" :order '((cof asc))) + :lrlname "KSRL" :order '(cof asc)) (setq cui2 (ensure-integer cui2)) (when (zerop cui2) (setq cui2 nil)) (make-instance 'ucoc :cui1 (ensure-integer cui1) :cui2 (parse-cui cui2) :soc soc :cot cot @@ -240,7 +261,7 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" (with-umlisp-query ('mrcon (lui lat ts kluilrl) srl 'cui (parse-cui cui) :lrlname 'kluilrl :distinct t) (make-instance 'uterm :lui (ensure-integer lui) :cui (parse-cui cui) - :lat lat :ts ts :lrl (ensure-integer lrl)))) + :lat lat :ts ts :lrl (ensure-integer kluilrl)))) (defun find-uterm-lui (lui &key (srl *current-srl*)) "Return a list of uterm for lui" @@ -249,13 +270,12 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" (make-instance 'uterm :cui (ensure-integer cui) :lui (parse-lui lui) :lat lat :ts ts :lrl (ensure-integer kluilrl)))) - (defun find-uterm-cuilui (cui lui &key (srl *current-srl*)) "Return single uterm for cui/lui" (with-umlisp-query ('mrcon (lat ts kluilrl) srl 'kcuilui (make-cuilui (parse-cui cui) (parse-lui lui)) :lrlname 'kluilrl :single t) - (make-instance 'uterm :cui cui :lui lui :lat lat :ts ts :lrl (ensure-integer kluilrl))))) + (make-instance 'uterm :cui cui :lui lui :lat lat :ts ts :lrl (ensure-integer kluilrl)))) (defun find-ustr-cuilui (cui lui &key (srl *current-srl*)) "Return a list of ustr for cui/lui" @@ -280,8 +300,8 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" (defun find-ustr-sab (sab &key (srl *current-srl*)) "Return the list of ustr for sab" - (with-umlisp-query ('mrso '(kcuisui) srl 'sab sab :lrlname 'srl) - (let ((cuisui (ensure-integer (car tuple)))) + (with-umlisp-query ('mrso (kcuisui) srl 'sab sab :lrlname 'srl) + (let ((cuisui (ensure-integer kcuisui))) (apply #'find-ustr-cuisui (append (multiple-value-list (decompose-cuisui cuisui)) (list :srl srl)))))) @@ -304,20 +324,20 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" :lrl lrl :str pfstr)) (query-string 'mrcon '(cui lui sui stt lrl kpfstr) srl nil nil :lrlname 'lrl :distinct t - :order '((sui asc))) + :order '(sui asc)) :database db))) (defun find-string-sui (sui &key (srl *current-srl*)) "Return the string associated with sui" - (with-umlisp-query ('mrcon '(str) srl 'sui sui :lrlname 'lrl :single t) - (car tuple))) + (with-umlisp-query ('mrcon (str) srl 'sui sui :lrlname 'lrl :single t) + str)) (defun find-uso-cuisui (cui sui &key (srl *current-srl*)) (with-umlisp-query ('mrso (sab code srl tty) srl 'kcuisui (make-cuisui cui sui) :lrlname 'srl) (make-instance 'uso :sab sab :code code :srl srl :tty tty))) (defun find-ucxt-cuisui (cui sui &key (srl *current-srl*)) - (with-umlisp-query ('mrcxt (sab code cxn cxl rnk cxs cui2 hcd rela cx) srl 'kcuisui + (with-umlisp-query ('mrcxt (sab code cxn cxl rnk cxs cui2 hcd rela xc) srl 'kcuisui (make-cuisui cui sui) :lrlname 'ksrl) (make-instance 'ucxt :sab sab :code code :cxn (ensure-integer cxn) @@ -353,7 +373,7 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" (defun find-usty-all () "Return list of usty's for all semantic types" - (with-umlisp-query ('mrsty '(tui) nil nil nil :distinct t) + (with-umlisp-query ('mrsty (tui) nil nil nil :distinct t) (find-usty-tui tui))) (defun find-usab-all () @@ -395,39 +415,40 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" (defun find-ucon-tui (tui &key (srl *current-srl*)) "Find list of ucon for tui" - (with-umlisp-query ('mrsty (cui) srl 'tui (parse-tui tui) :lrlname 'klrl :order '((cui asc))) + (with-umlisp-query ('mrsty (cui) srl 'tui (parse-tui tui) :lrlname 'klrl + :order '(cui asc)) (find-ucon-cui (ensure-integer cui) :srl srl))) (defun find-ucon-word (word &key (srl *current-srl*) (like nil)) "Return list of ucons that match word. Optionally, use SQL's LIKE syntax" (with-umlisp-query ('mrxw_eng (cui) srl 'wd word :like like :distinct t - :lrlname 'klrl :order '((cui asc))) + :lrlname 'klrl :order '(cui asc)) (find-ucon-cui cui :srl srl))) (defun find-ucon-normalized-word (word &key (srl *current-srl*) (like nil)) "Return list of ucons that match word, optionally use SQL's LIKE syntax" (with-umlisp-query ('mrxnw_eng (cui) srl 'nwd word :like like :distinct t - :lrlname 'klrl :order '((cui asc))) + :lrlname 'klrl :order '(cui asc)) (find-ucon-cui cui :srl srl))) (defun find-ustr-word (word &key (srl *current-srl*)) "Return list of ustrs that match word" (with-umlisp-query ('mrxw_eng (cui sui) srl 'wd word :lrlname 'klrl - :order '((cui asc) (sui asc))) + :order '(cui asc sui asc)) (find-ustr-cuisui (ensure-integer cui) (ensure-integer sui) :srl srl))) (defun find-ustr-normalized-word (word &key (srl *current-srl*)) "Return list of ustrs that match word" (with-umlisp-query ('mrxnw_eng (cui sui) srl 'nwd word :lrlname 'klrl - :order '((cui asc) (sui asc))) + :order '(cui asc sui asc)) (find-ustr-cuisui (ensure-integer cui) (ensure-integer sui) :srl srl))) ;; Special tables (defun find-usrl-all () - (with-umlisp-query ('usrl (sab srl) nil nil nil :order '((sab asc)) - (make-instance 'usrl :sab sab :srl (ensure-integer srl)) usrls)) + (with-umlisp-query ('usrl (sab srl) nil nil nil :order '(sab asc)) + (make-instance 'usrl :sab sab :srl (ensure-integer srl)))) ;;; Multiword lookup and score functions @@ -533,7 +554,7 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" (defun find-lmod-eui (eui) (with-umlisp-query ('lrmod (bas sca psn_mod fea) nil 'eui eui) - (make-instance 'lmod :eui eui :bas bas :sca sca :psnmod psnmod :fea fea))) + (make-instance 'lmod :eui eui :bas bas :sca sca :psnmod psn_mod :fea fea))) (defun find-lnom-eui (eui) (with-umlisp-query ('lrnom (bas sca eui2 bas2 sca2) nil 'eui eui) @@ -571,7 +592,7 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" (defun find-sdef-ui (ui) (with-umlisp-query ('srdef (rt sty_rl stn_rtn def ex un rh abr rin) nil 'ui ui :single t) - (make-instance 'sdef :rt rt :ui ui :styrl styrl :stnrtn stnrtn + (make-instance 'sdef :rt rt :ui ui :styrl sty_rl :stnrtn stn_rtn :def def :ex ex :un un :rh rh :abr abr :rin rin))) (defun find-sstre1-ui (ui) @@ -586,7 +607,7 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" (defun find-sstr-rl (rl) (with-umlisp-query ('srstre (sty_rl sty_rl2 ls) nil 'rl rl) - (make-instance 'sstr :rl rl :styrl styrl :styrl2 styrl2 :ls ls))) + (make-instance 'sstr :rl rl :styrl sty_rl :styrl2 sty_rl2 :ls ls))) (defun find-sstre2-sty (sty) (with-umlisp-query ('srstre2 (rl sty2) nil 'sty sty) @@ -594,4 +615,4 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" (defun find-sstr-styrl (styrl) (with-umlisp-query ('srstr (rl sty_rl2 ls) nil 'styrl styrl) - (make-instance 'sstr :styrl styrl :rl rl :styrl2 styrl2 :ls ls))) + (make-instance 'sstr :styrl styrl :rl rl :styrl2 sty_rl2 :ls ls)))