(setq *rt-basic*
'(
- (deftest :qrystr/1 (umlisp::query-string mrcon (cui lui))
- "SELECT CUI,LUI FROM MRCON")
-
- (deftest :qrystr/1e (umlisp::query-string-eval 'mrcon '(cui lui))
- "SELECT CUI,LUI FROM MRCON")
-
- (deftest :qrystr/2 (umlisp::query-string mrcon (cui lui) 0)
- "SELECT CUI,LUI FROM MRCON AND KCUILRL<=0")
-
- (deftest :qrystr/2e (umlisp::query-string-eval 'mrcon '(cui lui) 0)
- "SELECT CUI,LUI FROM MRCON AND KCUILRL<=0")
-
- (deftest :qrystr/3 (umlisp::query-string mrcon (cui lui) nil cui 5)
- "SELECT CUI,LUI FROM MRCON WHERE CUI='5'")
-
- (deftest :qrystr/3e (umlisp::query-string-eval 'mrcon '(cui lui) nil 'cui 5)
- "SELECT CUI,LUI FROM MRCON WHERE CUI='5'")
-
- (deftest :qrystr/4 (umlisp::query-string mrcon (cui lui) nil kpfstr "Abc")
- "SELECT CUI,LUI FROM MRCON WHERE KPFSTR='Abc'")
-
- (deftest :qrystr/4e (umlisp::query-string-eval 'mrcon '(cui lui) nil 'kpfstr "Abc")
- "SELECT CUI,LUI FROM MRCON WHERE KPFSTR='Abc'")
-
- (deftest :qrystr/5 (umlisp::query-string mrcon (cui lui) 2 cui 5 :single t)
- "SELECT CUI,LUI FROM MRCON WHERE CUI='5' AND KCUILRL<=2 LIMIT 1")
-
- (deftest :qrystr/5e (umlisp::query-string-eval 'mrcon '(cui lui) 2 'cui 5 :single t)
- "SELECT CUI,LUI FROM MRCON WHERE CUI='5' AND KCUILRL<=2 LIMIT 1")
-
+ (deftest :qrystr/1 (umlisp::query-string mrconso (cui lui) nil nil nil)
+ "SELECT CUI,LUI FROM MRCONSO")
+
+ (deftest :qrystr/1e (umlisp::query-string-eval 'mrconso '(cui lui) nil nil nil)
+ "SELECT CUI,LUI FROM MRCONSO")
+
+ (deftest :qrystr/2 (umlisp::query-string mrconso (cui lui) 0 nil nil)
+ "SELECT CUI,LUI FROM MRCONSO AND KCUILRL<=0")
+
+ (deftest :qrystr/2e (umlisp::query-string-eval 'mrconso '(cui lui) 0 nil nil)
+ "SELECT CUI,LUI FROM MRCONSO AND KCUILRL<=0")
+
+ (deftest :qrystr/3 (umlisp::query-string mrconso (cui lui) nil cui 5)
+ "SELECT CUI,LUI FROM MRCONSO WHERE CUI='5'")
+
+ (deftest :qrystr/3e (umlisp::query-string-eval 'mrconso '(cui lui) nil 'cui 5)
+ "SELECT CUI,LUI FROM MRCONSO WHERE CUI='5'")
+
+ (deftest :qrystr/4 (umlisp::query-string mrconso (cui lui) nil kpfstr "Abc")
+ "SELECT CUI,LUI FROM MRCONSO WHERE KPFSTR='Abc'")
+
+ (deftest :qrystr/4e (umlisp::query-string-eval 'mrconso '(cui lui) nil 'kpfstr "Abc")
+ "SELECT CUI,LUI FROM MRCONSO WHERE KPFSTR='Abc'")
+
+ (deftest :qrystr/5 (umlisp::query-string mrconso (cui lui) 2 cui 5 :single t)
+ "SELECT CUI,LUI FROM MRCONSO WHERE CUI='5' AND KCUILRL<=2 LIMIT 1")
+
+ (deftest :qrystr/5e (umlisp::query-string-eval 'mrconso '(cui lui) 2 'cui 5 :single t)
+ "SELECT CUI,LUI FROM MRCONSO WHERE CUI='5' AND KCUILRL<=2 LIMIT 1")
+
(deftest :qrystr/6 (umlisp::query-string mrdef (sab def) 2 cui 39 :lrl ksrl :single t)
"SELECT SAB,DEF FROM MRDEF WHERE CUI='39' AND KSRL<=2 LIMIT 1")
-
+
(deftest :qrystr/6e (umlisp::query-string-eval 'mrdef '(sab def) 2 'cui 39 :lrl 'ksrl :single t)
"SELECT SAB,DEF FROM MRDEF WHERE CUI='39' AND KSRL<=2 LIMIT 1")
-
+
(deftest :qrystr/7 (umlisp::query-string mrdef (sab def) 2 cui 39 :lrl ksrl :order (cui asc))
"SELECT SAB,DEF FROM MRDEF WHERE CUI='39' AND KSRL<=2 ORDER BY CUI asc")
-
+
(deftest :qrystr/7e (umlisp::query-string-eval 'mrdef '(sab def) 2 'cui 39 :lrl 'ksrl :order '(cui asc))
"SELECT SAB,DEF FROM MRDEF WHERE CUI='39' AND KSRL<=2 ORDER BY CUI asc")
-
+
(deftest :qrystr/8 (umlisp::query-string mrdef (sab def) 2 cui 39 :lrl ksrl
:order (cui asc def desc))
"SELECT SAB,DEF FROM MRDEF WHERE CUI='39' AND KSRL<=2 ORDER BY CUI asc,DEF desc")
-
+
(deftest :qrystr/8e (umlisp::query-string-eval 'mrdef '(sab def) 2 'cui 39 :lrl 'ksrl
- :order '(cui asc def desc))
+ :order '(cui asc def desc))
"SELECT SAB,DEF FROM MRDEF WHERE CUI='39' AND KSRL<=2 ORDER BY CUI asc,DEF desc")
-
+
(deftest :ui/1 (umlisp::parse-cui "C0002341") 2341)
(deftest :ui/2 (umlisp::parse-lui "L0002341") 2341)
(deftest :ui/3 (umlisp::parse-sui "S0000000") 0)
(deftest :ui/13 (umlisp::parse-eui "E00002311") 2311)
(deftest :ui/14 (umlisp::parse-lui "1234") 1234)
(deftest :ui/15 (umlisp::parse-lui 1234) 1234)
-
+
))
(deftest :parse/1
(umlisp::decompose-fil "abc")
"abc" nil)
-
+
(deftest :parse/2
(umlisp::decompose-fil "dir/abc")
"abc" "dir")
-
+
(deftest :parse/3
(umlisp::decompose-fil nil)
nil nil)
-
+
(deftest :parse/4
(umlisp::filename-to-tablename "test")
"test")
-
+
(deftest :parse/5
(umlisp::filename-to-tablename "TEST.AB.RRF")
"TEST_AB")))
(append
*rt-parse*
'(
- (deftest uparse.1 (length *umls-files*) 64)
- (deftest uparse.2 (length *umls-cols*) 327)
+ (deftest uparse.1 (length *umls-files*) 63)
+ (deftest uparse.2 (length *umls-cols*) 434)
(deftest uparse.3
(sort (mapcar #'u::col (umlisp::ucols (umlisp::find-ufile "MRCONSO.RRF")))
#'string<)
- ("AUI" "CODE" "CUI" "CVF" "ISPREF" "KCUILRL" "KCUILUI" "KCUISUI" "KLUILRL" "KPFSTR" "LAT" "LUI" "SAB" "SAUI" "SCUI" "SDUI" "SRL" "STR"
- "STT" "SUI" "SUPPRESS" "TS" "TTY"))
+ ("AUI" "CODE" "CUI" "CVF" "ISPREF" "KCUILRL" "KCUILUI" "KCUISUI" "KLUILRL"
+ "KPFENG" "KSUILRL" "LAT" "LUI" "SAB" "SAUI" "SCUI" "SDUI" "SRL" "STR" "STT"
+ "SUI" "SUPPRESS" "TS" "TTY"))
(deftest uparse.4
(equal
(sort (mapcar #'u::col (umlisp::ucols (umlisp::find-ufile "MRCONSO.RRF")))
#'string<)
- (sort (umlisp::fields (umlisp::find-ufile "MRCONSO.RRF"))
+ (sort (copy-seq (umlisp::fields (umlisp::find-ufile "MRCONSO.RRF")))
#'string<))
t)
(deftest uparse.5
(sort
(umlisp::custom-colnames-for-filename "MRCONSO.RRF")
#'string<)
- ("KCUILRL" "KCUILUI" "KCUISUI" "KLUILRL" "KPFSTR"))
+ ("KCUILRL" "KCUILUI" "KCUISUI" "KLUILRL" "KPFENG" "KSUILRL"))
(deftest uparse.6
(compiled-function-p
(umlisp::custom-value-fun