"Returns umls-file structure for a filename"
(find-if #'(lambda (f) (string= filename (fil f))) *umls-files*))
-(defvar *position-hash* (make-hash-table :test 'eq))
-
-(defun position-field-file (filename fieldname key)
+(defun position-field-file (filename fieldname)
"Returns the position of a field in a file"
- (multiple-value-bind (pos found) (gethash key *position-hash*)
- (if found
- (return-from position-field-file pos)))
-
(let ((ufile (find-ufile filename)))
(unless ufile
(warn "Unable to find ufile for filename ~A." filename)
(unless pos
(warn "Unable to find field ~A in ufile ~S." fieldname ufile)
(return-from position-field-file nil))
- (setf (gethash key *position-hash*) pos)
pos)))
(defun find-ucols-for-ufile (ufile)
'(("KCON" "SELECT CUI,STR FROM MRCONSO WHERE STT='PF' AND TS='P' AND ISPREF='Y' AND LAT='ENG'"))
"Custom tables to create")
+(defvar *vff-position-hash* (make-hash-table :size 100 :test 'eq))
+
+
(defmacro vff (filename fieldname record)
(let ((pos (gensym "POS-"))
+ (found (gensym "FOUND-"))
(key (kmrcl:ensure-keyword (concatenate 'string filename "^" fieldname))))
- `(let ((,pos (position-field-file ,filename ,fieldname ,key)))
- (unless ,pos
- (error "Did not find fieldname ~A in filename ~A." ,fieldname ,filename))
- (locally (declare (type (integer 0 100000) ,pos))
- (nth ,pos ,record)))))
+ `(locally (declare (optimize (speed 3) (size 0) (safety 0)))
+ (multiple-value-bind (,pos ,found) (gethash ,key *vff-position-hash*)
+ (if ,pos
+ (locally (declare (type (integer 0 100000) ,pos))
+ (nth ,pos ,record))
+ (let ((,pos (position-field-file ,filename ,fieldname)))
+ (unless ,pos
+ (error "Did not find fieldname ~A in filename ~A." ,fieldname ,filename))
+ (locally (declare (type (integer 0 100000) ,pos))
+ (setf (gethash ,key *vff-position-hash*) ,pos)
+ (nth ,pos ,record))))))))
(defparameter +custom-cols+
'(#+nil ("MRCONSO.RRF" "KPFSTR" "TEXT"