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[ctsim.git] / doc / ctsim.tex
1 \documentclass[11pt]{report}%
2 \usepackage{graphicx}
3 \usepackage{texhelp}
4 \usepackage{fancyhea}
5 %\usepackage{mysober}
6 \usepackage{mytitle}
7 %\usepackage{verbatim}
8 \usepackage{makeidx}
9 %\usepackage{times}
10 \usepackage{hyperref}
11 \input{psbox.tex}
12
13 \latexonly{\includeonly{ctsim-concepts,ctsim-install,ctsim-gui,ctsim-textui,ctsim-web,ctsim-appendix}}
14 \hyphenation{poly-gon-al}
15
16 \newcommand{\ctsim}{\texttt{CTSim}}
17 \newcommand{\ctsimtext}{\texttt{CTSimText}}
18 \newcommand{\usage}{\textbf{Usage}\par}
19
20 \newcommand{\commandref}[2]{\helpref{{\tt $\backslash$#1}}{#2}}%
21 \newcommand{\commandrefn}[2]{\helprefn{{\tt $\backslash$#1}}{#2}\index{#1}}%
22 \newcommand{\commandpageref}[2]{\latexignore{\helprefn{{\tt $\backslash$#1}}{#2}}\latexonly{{\tt $\backslash$#1} {\it page \pageref{#2}}}\index{#1}}
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24 \newcommand{\inioption}[1]{{\bf {\tt #1}}\index{#1}}%
25
26 \latexignore{\newcommand{\sqrt}[2]{sqrt(#2)}}%
27
28 \parskip=10pt%
29 \parindent=0pt%
30 %\backgroundcolour{255;255;255}\textcolour{0;0;0}% Has an effect in HTML only
31 \title{CTSim 3.0 User Manual}%
32 \author{Kevin Rosenberg, M.D.}%
33 \date{February 9, 2001}%
34 \makeindex%
35
36 \begin{document}%
37 \maketitle%
38 \pagestyle{fancyplain}%
39 \pagenumbering{roman}%
40
41 \setheader{{\it CONTENTS}}{}{}{}{}{{\it CONTENTS}}%
42 \setfooter{\thepage}{}{}{}{}{\thepage}%
43 \parskip=2pt
44 \tableofcontents%
45
46 \parskip=10pt
47 \chapter*{Copyright notice}%
48 \setheader{{\it COPYRIGHT}}{}{}{}{}{{\it COPYRIGHT}}%
49 \setfooter{\thepage}{}{}{}{}{\thepage}%
50
51 Copyright (c) 1983-2001 Kevin Rosenberg, M.D.
52
53 Permission to use, copy, modify, and distribute this software and its
54 documentation for any purpose is hereby granted without fee, provided that the
55 above copyright notice, author statement and this permission notice appear in
56 all copies of this software and related documentation.
57
58 THE SOFTWARE IS PROVIDED ``AS-IS'' AND WITHOUT WARRANTY OF ANY KIND, EXPRESS,
59 IMPLIED OR OTHERWISE, INCLUDING WITHOUT LIMITATION, ANY WARRANTY OF
60 MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE.
61
62 IN NO EVENT SHALL KEVIN ROSENBERG BE LIABLE FOR ANY
63 SPECIAL, INCIDENTAL, INDIRECT OR CONSEQUENTIAL DAMAGES OF ANY KIND, OR
64 ANY DAMAGES WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS,
65 WHETHER OR NOT ADVISED OF THE POSSIBILITY OF DAMAGE, AND ON ANY THEORY
66 OF LIABILITY, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
67 PERFORMANCE OF THIS SOFTWARE.
68
69 \chapter{Introduction}\label{introduction}%
70 \pagenumbering{arabic}%
71 \setheader{{\it CHAPTER \thechapter}}{}{}{}{}{{\it CHAPTER \thechapter}}%
72 \setfooter{\thepage}{}{}{}{}{\thepage}%
73
74 $$\image{3cm;3cm}{logo-huge.eps}$$
75 Computed Tomography is a technique for estimating the interior of an object
76 from measurement of radiation collected around the object. This radiation
77 can be either projected through or emitted from the object.
78 \rtfsp\ctsim\ simulates the process of projecting X-rays through a phantom object.
79 \rtfsp\ctsim\ can then reconstruct the interior of the object from the projections
80 collected around the phantom object.
81
82 This manual begins with an introduction into the concepts of
83 \rtfsp\ctsim. Then, the graphical shell, \helprefn{ctsim}{ctsim},
84 is documented followed the the command-line shell,
85 \helprefn{ctsimtext}{ctsimtext}. Finally, the web-based
86 \helprefn{interface}{webinterface} is discussed followed by
87 \helprefn{installation}{installation} instructions.
88
89 I hope that you enjoy \ctsim!
90
91 \include{ctsim-concepts}
92
93 \include{ctsim-gui}
94
95 \include{ctsim-textui}
96
97 \include{ctsim-web}
98
99 \include{ctsim-install}
100
101 \include{ctsim-appendix}
102
103 \newpage
104
105 \bibliographystyle{plain}
106 \bibliography{ctsim}
107 \addcontentsline{toc}{chapter}{Bibliography}
108 \setheader{{\it REFERENCES}}{}{}{}{}{{\it REFERENCES}}%
109 \setfooter{\thepage}{}{}{}{}{\thepage}%
110
111 \addcontentsline{toc}{chapter}{Index}
112 \setheader{{\it INDEX}}{}{}{}{}{{\it INDEX}} %
113 \setfooter{\thepage}{}{}{}{}{\thepage} %
114 \printindex %
115
116 \end{document}%