X-Git-Url: http://git.kpe.io/?p=ctsim.git;a=blobdiff_plain;f=doc%2Fctsim.tex;h=0b656acbded42db63937e409b77589e1c0e7b750;hp=7501625a60fd232ee4a5239c124b7c10fdae2af7;hb=fd5767a661183c8fd4197accc0e9eef3fb5474bc;hpb=05c48981f4eacfe8a79f01a49cbddde10a94dda4

diff --git a/doc/ctsim.tex b/doc/ctsim.tex
index 7501625..0b656ac 100644
--- a/doc/ctsim.tex
+++ b/doc/ctsim.tex
@@ -1,15 +1,16 @@
-\documentclass[11pt]{report}%
+\documentclass[letterpaper,11pt]{report}%
 \usepackage{graphicx}
 \usepackage{texhelp}
 \usepackage{fancyhea}
-%\usepackage{mysober}
+\usepackage{mysober}
 \usepackage{mytitle}
-%\usepackage{verbatim}
+\usepackage{verbatim}
 \usepackage{makeidx}
 %\usepackage{times}
 \usepackage{hyperref}
 \input{psbox.tex}
 
+\latexonly{\includeonly{ctsim-concepts,ctsim-install,ctsim-gui,ctsim-textui,ctsim-web,ctsim-appendix}}
 \hyphenation{poly-gon-al}
 
 \newcommand{\ctsim}{\texttt{CTSim}}
@@ -22,31 +23,37 @@
 \newcommand{\indexit}[1]{#1\index{#1}}%
 \newcommand{\inioption}[1]{{\bf {\tt #1}}\index{#1}}%
 
-\latexignore{\newcommand{\sqrt}[2]{sqrt(#2)}}%
+\newcommand{\manvernum}[0]{0.6}
+\newcommand{\manver}[0]{v\manvernum}
+\newcommand{\mandate}[0]{February 16, 2001}
+\newcommand{\ctsimfooter}{\setfooter{\thepage}{}{}{\small Manual \manver}{\small \mandate}{\thepage}}
+\newcommand{\doublehyphen}[1]{-\,-\texttt{#1}}
+\newcommand{\ctsimvernum}[0]{3.0.0}
+\newcommand{\ctsimver}[0]{CTSim \ctsimvernum}
+\newcommand{\ctsimheadtitle}{\ctsimver\ Manual}
+
+\latexignore{\newcommand{\sqrt}[2]{sqrt(#2)}}
 
 \parskip=10pt%
 \parindent=0pt%
 %\backgroundcolour{255;255;255}\textcolour{0;0;0}% Has an effect in HTML only
-\winhelpignore{\title{CTSim 3.0 User Manual}%
+\title{CTSim 3.0 User Manual}%
 \author{Kevin Rosenberg, M.D.}%
-\date{January 2001}%
-}%
-\winhelponly{\title{CTSim 3.0 User Manual}%
-\author{by Kevin Rosenberg, M.D.\\$$\image{3cm;3cm}{logo-huge.bmp}$$}%
-}%
 \makeindex%
-\begin{document}%
-\maketitle%
-\pagestyle{fancyplain}%
-\pagenumbering{roman}%
 
-\setheader{{\it CONTENTS}}{}{}{}{}{{\it CONTENTS}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
-\tableofcontents%
+\begin{document}
+\textheight=9in
+\textwidth=6.5in
+\evensidemargin=0in
+\oddsidemargin=0in
+
+\maketitle
+\pagestyle{fancyplain}
+\pagenumbering{roman}
 
 \chapter*{Copyright notice}%
-\setheader{{\it COPYRIGHT}}{}{}{}{}{{\it COPYRIGHT}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
+\setheader{{\it COPYRIGHT}}{}{}{\ctsimheadtitle}{}{{\it COPYRIGHT}}%
+\ctsimfooter
 
 Copyright (c) 1983-2001 Kevin Rosenberg, M.D.
 
@@ -66,32 +73,54 @@ WHETHER OR NOT ADVISED OF THE POSSIBILITY OF DAMAGE, AND ON ANY THEORY
 OF LIABILITY, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
 PERFORMANCE OF THIS SOFTWARE.
 
-\chapter{Introduction}\label{introduction}%
-\pagenumbering{arabic}%
-\setheader{{\it CHAPTER \thechapter}}{}{}{}{}{{\it CHAPTER \thechapter}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
 
-$$\image{3cm;3cm}{logo-huge.eps}$$
-Computed Tomography is a technique for estimating the interior of an object
-from measurement of radiation collected around the object. This radiation
-can be either projected through or emitted from the object.
-\rtfsp\ctsim\ simulates the process of projecting X-rays through a phantom object.
-\rtfsp\ctsim\ can then reconstruct the interior of the object from the projections
-collected around the phantom object.
+\chapter*{Acknowledgements}
+\setheader{{\it COPYRIGHT}}{}{}{\ctsimheadtitle}{}{{\it COPYRIGHT}}%
+\setfooter{\thepage}{}{}{}{\manver}{\thepage}%
 
-The \ctsim\ package has two executable files: the graphical 
-\helprefn{ctsim}{ctsim} and text \helprefn{ctsimtext}{ctsimtext} programs.
+\textbf{Ian Kay, Ph.D.}\\
+Special thanks to Dr. Kay for contributing portions to this manual. Dr. Kay has assisted the
+development of \ctsim\ with bug reports and fixes.
 
-\include{ctsim-concepts}
+\textbf{Gabor T. Herman, Ph.D.}\\
+Dr. Herman's publications on computed tomography inspired me to
+create the initial version \ctsim\ in 1983. Dr. Herman
+has graciously permitted use of his
+copyrighted head phantom for use in \ctsim.
 
-\include{ctsim-install}
 
-\include{ctsim-gui}
+\setheader{{\it CONTENTS}}{}{}{\ctsimheadtitle}{}{{\it CONTENTS}}%
+\ctsimfooter
+\parskip=2pt
+\tableofcontents%
 
-\include{ctsim-textui}
+\parskip=10pt
+\chapter{Introduction}\label{IDH_INTRODUCTION}
+\pagenumbering{arabic}
+\setheader{{\it CHAPTER \thechapter}}{}{}{\ctsimheadtitle}{}{{\it CHAPTER \thechapter}}%
+\ctsimfooter
 
-\include{ctsim-web}
 
+\centerline{\image{3cm;3cm}{logo-huge.eps}}
+Computed tomography is a technique for estimating the interior of an
+object from measurements of radiation collected around the object. This
+radiation can be either projected through or emitted from the
+object. \ctsim\ simulates the process of projecting X-rays
+through a phantom object. \ctsim\ can then reconstruct the
+interior of the object from those projections. \ctsim\ integrates
+numerous visualization and analytic tools.
+
+This manual begins with an introduction into the concepts of
+\ctsim. Next, the graphical, command-line, and web shells are
+presented. Finally, the installation of \ctsim\ is discussed.
+
+I hope that you enjoy \ctsim!
+
+\include{ctsim-concepts}
+\include{ctsim-gui}
+\include{ctsim-textui}
+\include{ctsim-web}
+\include{ctsim-install}
 \include{ctsim-appendix}
 
 \newpage
@@ -99,12 +128,13 @@ The \ctsim\ package has two executable files: the graphical
 \bibliographystyle{plain}
 \bibliography{ctsim}
 \addcontentsline{toc}{chapter}{Bibliography}
-\setheader{{\it REFERENCES}}{}{}{}{}{{\it REFERENCES}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
+\setheader{{\it REFERENCES}}{}{}{\ctsimheadtitle}{}{{\it REFERENCES}}
+\ctsimfooter
 
+\newpage
 \addcontentsline{toc}{chapter}{Index}
-\setheader{{\it INDEX}}{}{}{}{}{{\it INDEX}} %
-\setfooter{\thepage}{}{}{}{}{\thepage} %
-\printindex %
+\setheader{{\it INDEX}}{}{}{\ctsimheadtitle}{}{{\it INDEX}} %
+\ctsimfooter
+\printindex
 
-\end{document}%
+\end{document}