X-Git-Url: http://git.kpe.io/?p=ctsim.git;a=blobdiff_plain;f=doc%2Fctsim.tex;h=0b656acbded42db63937e409b77589e1c0e7b750;hp=75672f78a3e83245d2bb3e5eb4b85de0da692567;hb=fd5767a661183c8fd4197accc0e9eef3fb5474bc;hpb=e5c753200f28fdf5542a48051ad79c7c7dfbb299

diff --git a/doc/ctsim.tex b/doc/ctsim.tex
index 75672f7..0b656ac 100644
--- a/doc/ctsim.tex
+++ b/doc/ctsim.tex
@@ -1,8 +1,8 @@
-\documentclass[letterpaper,12pt]{report}%
+\documentclass[letterpaper,11pt]{report}%
 \usepackage{graphicx}
 \usepackage{texhelp}
 \usepackage{fancyhea}
-%\usepackage{mysober}
+\usepackage{mysober}
 \usepackage{mytitle}
 \usepackage{verbatim}
 \usepackage{makeidx}
@@ -23,11 +23,14 @@
 \newcommand{\indexit}[1]{#1\index{#1}}%
 \newcommand{\inioption}[1]{{\bf {\tt #1}}\index{#1}}%
 
-\newcommand{\manvernum}[0]{0.3}
+\newcommand{\manvernum}[0]{0.6}
 \newcommand{\manver}[0]{v\manvernum}
-\newcommand{\mandate}[0]{February 12, 2001}
+\newcommand{\mandate}[0]{February 16, 2001}
 \newcommand{\ctsimfooter}{\setfooter{\thepage}{}{}{\small Manual \manver}{\small \mandate}{\thepage}}
 \newcommand{\doublehyphen}[1]{-\,-\texttt{#1}}
+\newcommand{\ctsimvernum}[0]{3.0.0}
+\newcommand{\ctsimver}[0]{CTSim \ctsimvernum}
+\newcommand{\ctsimheadtitle}{\ctsimver\ Manual}
 
 \latexignore{\newcommand{\sqrt}[2]{sqrt(#2)}}
 
@@ -36,23 +39,21 @@
 %\backgroundcolour{255;255;255}\textcolour{0;0;0}% Has an effect in HTML only
 \title{CTSim 3.0 User Manual}%
 \author{Kevin Rosenberg, M.D.}%
-\date{February 9, 2001}%
 \makeindex%
 
-\begin{document}%
-\maketitle%
-\pagestyle{fancyplain}%
-\pagenumbering{roman}%
+\begin{document}
+\textheight=9in
+\textwidth=6.5in
+\evensidemargin=0in
+\oddsidemargin=0in
 
-\setheader{{\it CONTENTS}}{}{}{}{}{{\it CONTENTS}}%
-\ctsimfooter
-\parskip=2pt
-\tableofcontents%
+\maketitle
+\pagestyle{fancyplain}
+\pagenumbering{roman}
 
-\parskip=10pt
 \chapter*{Copyright notice}%
-\setheader{{\it COPYRIGHT}}{}{}{}{}{{\it COPYRIGHT}}%
-\setfooter{\thepage}{}{}{}{\manver}{\thepage}%
+\setheader{{\it COPYRIGHT}}{}{}{\ctsimheadtitle}{}{{\it COPYRIGHT}}%
+\ctsimfooter
 
 Copyright (c) 1983-2001 Kevin Rosenberg, M.D.
 
@@ -72,41 +73,54 @@ WHETHER OR NOT ADVISED OF THE POSSIBILITY OF DAMAGE, AND ON ANY THEORY
 OF LIABILITY, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
 PERFORMANCE OF THIS SOFTWARE.
 
-\chapter{Introduction}\label{introduction}
+
+\chapter*{Acknowledgements}
+\setheader{{\it COPYRIGHT}}{}{}{\ctsimheadtitle}{}{{\it COPYRIGHT}}%
+\setfooter{\thepage}{}{}{}{\manver}{\thepage}%
+
+\textbf{Ian Kay, Ph.D.}\\
+Special thanks to Dr. Kay for contributing portions to this manual. Dr. Kay has assisted the
+development of \ctsim\ with bug reports and fixes.
+
+\textbf{Gabor T. Herman, Ph.D.}\\
+Dr. Herman's publications on computed tomography inspired me to
+create the initial version \ctsim\ in 1983. Dr. Herman
+has graciously permitted use of his
+copyrighted head phantom for use in \ctsim.
+
+
+\setheader{{\it CONTENTS}}{}{}{\ctsimheadtitle}{}{{\it CONTENTS}}%
+\ctsimfooter
+\parskip=2pt
+\tableofcontents%
+
+\parskip=10pt
+\chapter{Introduction}\label{IDH_INTRODUCTION}
 \pagenumbering{arabic}
-\setheader{{\it CHAPTER \thechapter}}{}{}{}{}{{\it CHAPTER \thechapter}}%
+\setheader{{\it CHAPTER \thechapter}}{}{}{\ctsimheadtitle}{}{{\it CHAPTER \thechapter}}%
 \ctsimfooter
 
 
 \centerline{\image{3cm;3cm}{logo-huge.eps}}
-Computed Tomography is a technique for estimating the interior of an
-object from
-measurement of radiation collected around the object. This
+Computed tomography is a technique for estimating the interior of an
+object from measurements of radiation collected around the object. This
 radiation can be either projected through or emitted from the
 object. \ctsim\ simulates the process of projecting X-rays
 through a phantom object. \ctsim\ can then reconstruct the
-interior of the object from the projections collected around the
-phantom object.
+interior of the object from those projections. \ctsim\ integrates
+numerous visualization and analytic tools.
 
 This manual begins with an introduction into the concepts of
-\ctsim. The graphical, \helprefn{ctsim}{ctsim}, and
-command-line, \helprefn{ctsimtext}{ctsimtext}, shells are then
-presented. Finally, the web-based
-\helprefn{interface}{webinterface} and
-\helprefn{installation}{installation} are discussed.
+\ctsim. Next, the graphical, command-line, and web shells are
+presented. Finally, the installation of \ctsim\ is discussed.
 
 I hope that you enjoy \ctsim!
 
 \include{ctsim-concepts}
-
 \include{ctsim-gui}
-
 \include{ctsim-textui}
-
 \include{ctsim-web}
-
 \include{ctsim-install}
-
 \include{ctsim-appendix}
 
 \newpage
@@ -114,12 +128,13 @@ I hope that you enjoy \ctsim!
 \bibliographystyle{plain}
 \bibliography{ctsim}
 \addcontentsline{toc}{chapter}{Bibliography}
-\setheader{{\it REFERENCES}}{}{}{}{}{{\it REFERENCES}}%
-\ctsimfooter%
+\setheader{{\it REFERENCES}}{}{}{\ctsimheadtitle}{}{{\it REFERENCES}}
+\ctsimfooter
 
+\newpage
 \addcontentsline{toc}{chapter}{Index}
-\setheader{{\it INDEX}}{}{}{}{}{{\it INDEX}} %
-\ctsimfooter %
-\printindex %
+\setheader{{\it INDEX}}{}{}{\ctsimheadtitle}{}{{\it INDEX}} %
+\ctsimfooter
+\printindex
 
 \end{document}