X-Git-Url: http://git.kpe.io/?p=ctsim.git;a=blobdiff_plain;f=doc%2Fctsim.tex;h=73deaf43dbbce8090180e9cdebb2bf174a68aff3;hp=71b7e88fedc71751dc8d2526ff25f22175a0dab4;hb=d3fa225aa232e132cc198672c4fc148f96a1ab8c;hpb=c472021e983cc7045c692d753ca0dcae5ced409f

diff --git a/doc/ctsim.tex b/doc/ctsim.tex
index 71b7e88..73deaf4 100644
--- a/doc/ctsim.tex
+++ b/doc/ctsim.tex
@@ -2,34 +2,37 @@
 \usepackage{graphicx}
 \usepackage{texhelp}
 \usepackage{fancyhea}
-\usepackage{mysober}
+%\usepackage{mysober}
 \usepackage{mytitle}
-\usepackage{verbatim}
+%\usepackage{verbatim}
 \usepackage{makeidx}
-\usepackage{times}
+%\usepackage{times}
 \usepackage{hyperref}
 \input{psbox.tex}
 
+\latexonly{\includeonly{ctsim-concepts,ctsim-install,ctsim-gui,ctsim-textui,ctsim-web,ctsim-appendix}}
+\hyphenation{poly-gon-al}
+
 \newcommand{\ctsim}{\texttt{CTSim}}
 \newcommand{\ctsimtext}{\texttt{CTSimText}}
 \newcommand{\usage}{\textbf{Usage}\par}
 
 \newcommand{\commandref}[2]{\helpref{{\tt $\backslash$#1}}{#2}}%
 \newcommand{\commandrefn}[2]{\helprefn{{\tt $\backslash$#1}}{#2}\index{#1}}%
-\newcommand{\commandpageref}[2]{\latexignore{\helprefn{{\tt $\backslash$#1}}{#2}}\latexonly{{\tt $\backslash$#1} {\it page \pageref{#2}}}\index{#1}}%
+\newcommand{\commandpageref}[2]{\latexignore{\helprefn{{\tt $\backslash$#1}}{#2}}\latexonly{{\tt $\backslash$#1} {\it page \pageref{#2}}}\index{#1}}
 \newcommand{\indexit}[1]{#1\index{#1}}%
 \newcommand{\inioption}[1]{{\bf {\tt #1}}\index{#1}}%
+
+\latexignore{\newcommand{\sqrt}[2]{sqrt(#2)}}%
+
 \parskip=10pt%
 \parindent=0pt%
 %\backgroundcolour{255;255;255}\textcolour{0;0;0}% Has an effect in HTML only
-\winhelpignore{\title{Manual for CTSim 3.0}%
+\title{CTSim 3.0 User Manual}%
 \author{Kevin Rosenberg, M.D.}%
-\date{January 2001}%
-}%
-\winhelponly{\title{Manual for CTSim 3.0}%
-\author{by Kevin Rosenberg, M.D.\\$$\image{3cm;3cm}{logo-huge.bmp}$$}%
-}%
+\date{February 9, 2001}%
 \makeindex%
+
 \begin{document}%
 \maketitle%
 \pagestyle{fancyplain}%
@@ -37,16 +40,16 @@
 
 \setheader{{\it CONTENTS}}{}{}{}{}{{\it CONTENTS}}%
 \setfooter{\thepage}{}{}{}{}{\thepage}%
+\parskip=2pt
 \tableofcontents%
 
+\parskip=10pt
 \chapter*{Copyright notice}%
 \setheader{{\it COPYRIGHT}}{}{}{}{}{{\it COPYRIGHT}}%
 \setfooter{\thepage}{}{}{}{}{\thepage}%
 
 Copyright (c) 1983-2001 Kevin Rosenberg, M.D.
 
-Specified file
-
 Permission to use, copy, modify, and distribute this software and its
 documentation for any purpose is hereby granted without fee, provided that the
 above copyright notice, author statement and this permission notice appear in
@@ -68,7 +71,7 @@ PERFORMANCE OF THIS SOFTWARE.
 \setheader{{\it CHAPTER \thechapter}}{}{}{}{}{{\it CHAPTER \thechapter}}%
 \setfooter{\thepage}{}{}{}{}{\thepage}%
 
-\image{3cm;3cm}{logo-huge.eps}
+$$\image{3cm;3cm}{logo-huge.eps}$$
 Computed Tomography is a technique for estimating the interior of an object
 from measurement of radiation collected around the object. This radiation
 can be either projected through or emitted from the object.
@@ -76,11 +79,16 @@ can be either projected through or emitted from the object.
 \rtfsp\ctsim\ can then reconstruct the interior of the object from the projections
 collected around the phantom object.
 
-The \ctsim\ package has two executable files: the graphical \helprefn{ctsim}{ctsim} and text \helprefn{ctsimtext}{ctsimtext} programs.
+This manual begins with an introduction into the concepts of
+\rtfsp\ctsim. Then, the graphical shell, \helprefn{ctsim}{ctsim},
+is documented followed the the command-line shell,
+\helprefn{ctsimtext}{ctsimtext}. Finally, the web-based
+\helprefn{interface}{webinterface} is discussed followed by
+\helprefn{installation}{installation} instructions.
 
-\include{ctsim-concepts}
+I hope that you enjoy \ctsim!
 
-\include{ctsim-install}
+\include{ctsim-concepts}
 
 \include{ctsim-gui}
 
@@ -88,6 +96,8 @@ The \ctsim\ package has two executable files: the graphical \helprefn{ctsim}{cts
 
 \include{ctsim-web}
 
+\include{ctsim-install}
+
 \include{ctsim-appendix}
 
 \newpage