X-Git-Url: http://git.kpe.io/?p=ctsim.git;a=blobdiff_plain;f=libctsim%2Fimagefile.cpp;h=b4564322c6f32745c75734a64efd559f04f3332d;hp=df647ce930efad8de0b4a8288f14c99499fc71bb;hb=7f8f356151b0c8db0dbbf1c1896cc22630d6c774;hpb=7ec2cd66921180a624813dff9f8bac76c6b268cc diff --git a/libctsim/imagefile.cpp b/libctsim/imagefile.cpp index df647ce..b456432 100644 --- a/libctsim/imagefile.cpp +++ b/libctsim/imagefile.cpp @@ -9,7 +9,7 @@ ** This is part of the CTSim program ** Copyright (C) 1983-2000 Kevin Rosenberg ** -** $Id: imagefile.cpp,v 1.28 2001/01/01 10:14:34 kevin Exp $ +** $Id: imagefile.cpp,v 1.36 2001/01/12 16:41:56 kevin Exp $ ** ** This program is free software; you can redistribute it and/or modify ** it under the terms of the GNU General Public License (version 2) as @@ -27,68 +27,92 @@ #include "ct.h" +const int ImageFile::FORMAT_INVALID = -1; +const int ImageFile::FORMAT_PGM = 0; +const int ImageFile::FORMAT_PGMASCII = 1; +#ifdef HAVE_PNG +const int ImageFile::FORMAT_PNG = 2; +const int ImageFile::FORMAT_PNG16 = 3; +#endif + +const char* ImageFile::s_aszFormatName[] = +{ + {"pgm"}, + {"pgmascii"}, +#ifdef HAVE_PNG + {"png"}, + {"png16"}, +#endif +}; + +const char* ImageFile::s_aszFormatTitle[] = +{ + {"PGM"}, + {"PGM ASCII"}, + {"PNG"}, + {"PNG 16-bit"}, +}; -F32Image::F32Image (int nx, int ny, int dataType) -: Array2dFile (nx, ny, sizeof(kfloat32), Array2dFile::PIXEL_FLOAT32, dataType) -{ -} - -F32Image::F32Image (void) -: Array2dFile() -{ - setPixelFormat (Array2dFile::PIXEL_FLOAT32); - setPixelSize (sizeof(kfloat32)); - setDataType (Array2dFile::DATA_TYPE_REAL); -} - -F64Image::F64Image (int nx, int ny, int dataType) -: Array2dFile (nx, ny, sizeof(kfloat64), Array2dFile::PIXEL_FLOAT64, dataType) -{ -} - -F64Image::F64Image (void) -: Array2dFile () -{ - setPixelFormat (PIXEL_FLOAT64); - setPixelSize (sizeof(kfloat64)); - setDataType (Array2dFile::DATA_TYPE_REAL); -} +const int ImageFile::s_iFormatCount = sizeof(s_aszFormatName) / sizeof(const char*); + + + +F32Image::F32Image (int nx, int ny, int dataType) +: Array2dFile (nx, ny, sizeof(kfloat32), Array2dFile::PIXEL_FLOAT32, dataType) +{ +} + +F32Image::F32Image (void) +: Array2dFile() +{ + setPixelFormat (Array2dFile::PIXEL_FLOAT32); + setPixelSize (sizeof(kfloat32)); + setDataType (Array2dFile::DATA_TYPE_REAL); +} + +F64Image::F64Image (int nx, int ny, int dataType) +: Array2dFile (nx, ny, sizeof(kfloat64), Array2dFile::PIXEL_FLOAT64, dataType) +{ +} + +F64Image::F64Image (void) +: Array2dFile () +{ + setPixelFormat (PIXEL_FLOAT64); + setPixelSize (sizeof(kfloat64)); + setDataType (Array2dFile::DATA_TYPE_REAL); +} void -ImageFile::filterResponse (const char* const domainName, double bw, const char* const filterName, double filt_param) -{ - ImageFileArray v = getArray(); - SignalFilter filter (filterName, domainName, bw, filt_param); - -#if 1 - int iXCenter, iYCenter; - if (isEven (m_nx)) - iXCenter = m_nx / 2; - else - iXCenter = (m_nx - 1) / 2; - if (isEven (m_ny)) - iYCenter = m_ny / 2; - else - iYCenter = (m_ny - 1) / 2; - - for (int ix = 0; ix < m_nx; ix++) - for (int iy = 0; iy < m_ny; iy++) { - long lD2 = (ix - iXCenter) * (ix - iXCenter) + (iy - iYCenter) * (iy - iYCenter); - double r = ::sqrt (static_cast(lD2)); - v[ix][iy] = filter.response (r); - } -#else - int hx = (m_nx - 1) / 2; - int hy = (m_ny - 1) / 2; +ImageFile::getCenterCoordinates (unsigned int& iXCenter, unsigned int& iYCenter) +{ + if (isEven (m_nx)) + iXCenter = m_nx / 2; + else + iXCenter = (m_nx - 1) / 2; + + if (isEven (m_ny)) + iYCenter = m_ny / 2; + else + iYCenter = (m_ny - 1) / 2; +} + + +void +ImageFile::filterResponse (const char* const domainName, double bw, const char* const filterName, double filt_param, double dInputScale, double dOutputScale) +{ + ImageFileArray v = getArray(); + SignalFilter filter (filterName, domainName, bw, filt_param); - for (int i = -hx; i <= hx; i++) { - for (int j = -hy; j <= hy; j++) { - double r = ::sqrt (i * i + j * j); - - v[i+hx][j+hy] = filter.response (r); + unsigned int iXCenter, iYCenter; + getCenterCoordinates (iXCenter, iYCenter); + + for (unsigned int ix = 0; ix < m_nx; ix++) + for (unsigned int iy = 0; iy < m_ny; iy++) { + long lD2 = ((ix - iXCenter) * (ix - iXCenter)) + ((iy - iYCenter) * (iy - iYCenter)); + double r = ::sqrt (static_cast(lD2)) * dInputScale; + v[ix][iy] = filter.response (r) * dOutputScale; } - } -#endif } int @@ -234,58 +258,58 @@ ImageFile::printStatistics (std::ostream& os) const { double min, max, mean, mode, median, stddev; - statistics (min, max, mean, mode, median, stddev); - if (isComplex()) - os << "Real Component Statistics" << std::endl; + statistics (min, max, mean, mode, median, stddev); + if (isComplex()) + os << "Real Component Statistics" << std::endl; os << " min: " << min << std::endl; os << " max: " << max << std::endl; os << " mean: " << mean << std::endl; os << " mode: " << mode << std::endl; os << "median: " << median << std::endl; - os << "stddev: " << stddev << std::endl; - - if (isComplex()) { - statistics (getImaginaryArray(), min, max, mean, mode, median, stddev); + os << "stddev: " << stddev << std::endl; + + if (isComplex()) { + statistics (getImaginaryArray(), min, max, mean, mode, median, stddev); os << std::endl << "Imaginary Component Statistics" << std::endl; - os << " min: " << min << std::endl; - os << " max: " << max << std::endl; - os << " mean: " << mean << std::endl; - os << " mode: " << mode << std::endl; - os << "median: " << median << std::endl; - os << "stddev: " << stddev << std::endl; - } + os << " min: " << min << std::endl; + os << " max: " << max << std::endl; + os << " mean: " << mean << std::endl; + os << " mode: " << mode << std::endl; + os << "median: " << median << std::endl; + os << "stddev: " << stddev << std::endl; + } } void ImageFile::statistics (double& min, double& max, double& mean, double& mode, double& median, double& stddev) const -{ - ImageFileArrayConst v = getArray(); - statistics (v, min, max, mean, mode, median, stddev); +{ + ImageFileArrayConst v = getArray(); + statistics (v, min, max, mean, mode, median, stddev); } -void -ImageFile::statistics (ImageFileArrayConst v, double& min, double& max, double& mean, double& mode, double& median, double& stddev) const -{ - int nx = m_nx; - int ny = m_ny; - - if (v == NULL || nx == 0 || ny == 0) - return; - - std::vector vecImage; - int iVec = 0; - vecImage.resize (nx * ny); - for (int ix = 0; ix < nx; ix++) { - for (int iy = 0; iy < ny; iy++) - vecImage[iVec++] = v[ix][iy]; - } - - vectorNumericStatistics (vecImage, nx * ny, min, max, mean, mode, median, stddev); -} - +void +ImageFile::statistics (ImageFileArrayConst v, double& min, double& max, double& mean, double& mode, double& median, double& stddev) const +{ + int nx = m_nx; + int ny = m_ny; + + if (v == NULL || nx == 0 || ny == 0) + return; + + std::vector vecImage; + int iVec = 0; + vecImage.resize (nx * ny); + for (int ix = 0; ix < nx; ix++) { + for (int iy = 0; iy < ny; iy++) + vecImage[iVec++] = v[ix][iy]; + } + + vectorNumericStatistics (vecImage, nx * ny, min, max, mean, mode, median, stddev); +} + void ImageFile::getMinMax (double& min, double& max) const { @@ -307,680 +331,917 @@ ImageFile::getMinMax (double& min, double& max) const } } } - -bool -ImageFile::convertRealToComplex () -{ - if (dataType() != Array2dFile::DATA_TYPE_REAL) - return false; - - if (! reallocRealToComplex()) - return false; - - ImageFileArray vImag = getImaginaryArray(); - for (unsigned int ix = 0; ix < m_nx; ix++) { - ImageFileColumn vCol = vImag[ix]; - for (unsigned int iy = 0; iy < m_ny; iy++) - *vCol++ = 0; - } - - return true; -} - -bool -ImageFile::convertComplexToReal () -{ - if (dataType() != Array2dFile::DATA_TYPE_COMPLEX) - return false; - - ImageFileArray vReal = getArray(); - ImageFileArray vImag = getImaginaryArray(); - for (unsigned int ix = 0; ix < m_nx; ix++) { - ImageFileColumn vRealCol = vReal[ix]; - ImageFileColumn vImagCol = vImag[ix]; - for (unsigned int iy = 0; iy < m_ny; iy++) { - CTSimComplex c (*vRealCol, *vImagCol); - *vRealCol++ = std::abs (c); - vImagCol++; - } - } - - return reallocComplexToReal(); -} - -bool -ImageFile::subtractImages (const ImageFile& rRHS, ImageFile& result) const -{ - if (m_nx != rRHS.nx() || m_ny != rRHS.ny() || m_nx != result.nx() || m_ny != result.ny()) { - sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::subtractImage]"); - return false; - } - - ImageFileArrayConst vLHS = getArray(); - ImageFileArrayConst vRHS = rRHS.getArray(); - ImageFileArray vResult = result.getArray(); - - for (unsigned int ix = 0; ix < m_nx; ix++) { - ImageFileColumnConst in1 = vLHS[ix]; - ImageFileColumnConst in2 = vRHS[ix]; - ImageFileColumn out = vResult[ix]; - for (unsigned int iy = 0; iy < m_ny; iy++) - *out++ = *in1++ - *in2++; - } - - return true; -} - -bool -ImageFile::addImages (const ImageFile& rRHS, ImageFile& result) const -{ - if (m_nx != rRHS.nx() || m_ny != rRHS.ny() || m_nx != result.nx() || m_ny != result.ny()) { - sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::subtractImage]"); - return false; - } - - ImageFileArrayConst vLHS = getArray(); - ImageFileArrayConst vRHS = rRHS.getArray(); - ImageFileArray vResult = result.getArray(); - - for (unsigned int ix = 0; ix < m_nx; ix++) { - ImageFileColumnConst in1 = vLHS[ix]; - ImageFileColumnConst in2 = vRHS[ix]; - ImageFileColumn out = vResult[ix]; - for (unsigned int iy = 0; iy < m_ny; iy++) - *out++ = *in1++ + *in2++; - } - - return true; -} - -bool -ImageFile::multiplyImages (const ImageFile& rRHS, ImageFile& result) const -{ - if (m_nx != rRHS.nx() || m_ny != rRHS.ny() || m_nx != result.nx() || m_ny != result.ny()) { - sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::subtractImage]"); - return false; - } - - ImageFileArrayConst vLHS = getArray(); - ImageFileArrayConst vRHS = rRHS.getArray(); - ImageFileArray vResult = result.getArray(); - - for (unsigned int ix = 0; ix < m_nx; ix++) { - ImageFileColumnConst in1 = vLHS[ix]; - ImageFileColumnConst in2 = vRHS[ix]; - ImageFileColumn out = vResult[ix]; - for (unsigned int iy = 0; iy < m_ny; iy++) - *out++ = *in1++ * *in2++; - } - - return true; -} - -bool -ImageFile::divideImages (const ImageFile& rRHS, ImageFile& result) const -{ - if (m_nx != rRHS.nx() || m_ny != rRHS.ny() || m_nx != result.nx() || m_ny != result.ny()) { - sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::subtractImage]"); - return false; - } - - ImageFileArrayConst vLHS = getArray(); - ImageFileArrayConst vRHS = rRHS.getArray(); - ImageFileArray vResult = result.getArray(); - - for (unsigned int ix = 0; ix < m_nx; ix++) { - ImageFileColumnConst in1 = vLHS[ix]; - ImageFileColumnConst in2 = vRHS[ix]; - ImageFileColumn out = vResult[ix]; - for (unsigned int iy = 0; iy < m_ny; iy++) { - if (*in2 != 0.) - *out++ = *in1++ / *in2++; - else - *out++ = 0; - } - } - - return true; -} - - -bool -ImageFile::invertPixelValues (ImageFile& result) const -{ - if (m_nx != result.nx() || m_ny != result.ny()) { - sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); - return false; - } - - ImageFileArrayConst vLHS = getArray(); - ImageFileArray vResult = result.getArray(); - - for (unsigned int ix = 0; ix < m_nx; ix++) { - ImageFileColumnConst in = vLHS[ix]; - ImageFileColumn out = vResult[ix]; - for (unsigned int iy = 0; iy < m_ny; iy++) - *out++ = - *in++; - } - - return true; -} - -bool -ImageFile::sqrt (ImageFile& result) const -{ - if (m_nx != result.nx() || m_ny != result.ny()) { - sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); - return false; - } - - ImageFileArrayConst vLHS = getArray(); - ImageFileArray vResult = result.getArray(); - - for (unsigned int ix = 0; ix < m_nx; ix++) { - ImageFileColumnConst in = vLHS[ix]; - ImageFileColumn out = vResult[ix]; - for (unsigned int iy = 0; iy < m_ny; iy++) - if (*in < 0) - *out++ = -::sqrt(-*in++); - else - *out++ = ::sqrt(*in++); - } - - return true; -} - -bool -ImageFile::log (ImageFile& result) const -{ - if (m_nx != result.nx() || m_ny != result.ny()) { - sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); - return false; - } - - ImageFileArrayConst vLHS = getArray(); - ImageFileArray vResult = result.getArray(); - - for (unsigned int ix = 0; ix < m_nx; ix++) { - ImageFileColumnConst in = vLHS[ix]; - ImageFileColumn out = vResult[ix]; - for (unsigned int iy = 0; iy < m_ny; iy++) - if (*in <= 0) - *out++ = 0; - else - *out++ = ::log(*in++); - } - - return true; -} - -bool -ImageFile::exp (ImageFile& result) const -{ - if (m_nx != result.nx() || m_ny != result.ny()) { - sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); - return false; - } - - ImageFileArrayConst vLHS = getArray(); - ImageFileArray vResult = result.getArray(); - - for (unsigned int ix = 0; ix < m_nx; ix++) { - ImageFileColumnConst in = vLHS[ix]; - ImageFileColumn out = vResult[ix]; - for (unsigned int iy = 0; iy < m_ny; iy++) - *out++ = ::exp (*in++); - } - - return true; -} - -namespace ProcessImage { - -void -shuffleFourierToNaturalOrder (ImageFile& im) -{ - ImageFileArray vReal = im.getArray(); - ImageFileArray vImag = im.getImaginaryArray(); - unsigned int ix, iy; - unsigned int nx = im.nx(); - unsigned int ny = im.ny(); - - // shuffle each column - for (ix = 0; ix < nx; ix++) { - ProcessSignal::shuffleFourierToNaturalOrder (vReal[ix], ny); - if (im.isComplex()) - ProcessSignal::shuffleFourierToNaturalOrder (vImag[ix], ny); - } - - // shuffle each row - float* pRow = new float [nx]; - for (iy = 0; iy < ny; iy++) { - for (ix = 0; ix < nx; ix++) - pRow[ix] = vReal[ix][iy]; - ProcessSignal::shuffleFourierToNaturalOrder (pRow, nx); - for (ix = 0; ix < nx; ix++) - vReal[ix][iy] = pRow[ix]; - if (im.isComplex()) { - for (ix = 0; ix < nx; ix++) - pRow[ix] = vImag[ix][iy]; - ProcessSignal::shuffleFourierToNaturalOrder (pRow, nx);; - for (ix = 0; ix < nx; ix++) - vImag[ix][iy] = pRow[ix]; - } - } - delete pRow; -} - -void -shuffleNaturalToFourierOrder (ImageFile& im) -{ - ImageFileArray vReal = im.getArray(); - ImageFileArray vImag = im.getImaginaryArray(); - unsigned int ix, iy; - unsigned int nx = im.nx(); - unsigned int ny = im.ny(); - - // shuffle each x column - for (ix = 0; ix < nx; ix++) { - ProcessSignal::shuffleNaturalToFourierOrder (vReal[ix], ny); - if (im.isComplex()) - ProcessSignal::shuffleNaturalToFourierOrder (vImag[ix], ny); - } - - // shuffle each y row - float* pRow = new float [nx]; - for (iy = 0; iy < ny; iy++) { - for (ix = 0; ix < nx; ix++) - pRow[ix] = vReal[ix][iy]; - ProcessSignal::shuffleNaturalToFourierOrder (pRow, nx); - for (ix = 0; ix < nx; ix++) - vReal[ix][iy] = pRow[ix]; - if (im.isComplex()) { - for (ix = 0; ix < nx; ix++) - pRow[ix] = vImag[ix][iy]; - ProcessSignal::shuffleNaturalToFourierOrder (pRow, nx); - for (ix = 0; ix < nx; ix++) - vImag[ix][iy] = pRow[ix]; - } - } - delete [] pRow; -} - - -}; // namespace ProcessIamge - -#ifdef HAVE_FFTW -bool -ImageFile::fft (ImageFile& result) const -{ - if (m_nx != result.nx() || m_ny != result.ny()) { - sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); - return false; - } - - if (result.dataType() == Array2dFile::DATA_TYPE_REAL) { - if (! result.reallocRealToComplex ()) - return false; - } - - fftw_complex* in = new fftw_complex [m_nx * m_ny]; - - ImageFileArrayConst vReal = getArray(); - ImageFileArrayConst vImag = getImaginaryArray(); - - unsigned int ix, iy; - unsigned int iArray = 0; - for (ix = 0; ix < m_nx; ix++) - for (iy = 0; iy < m_ny; iy++) { - in[iArray].re = vReal[ix][iy]; - if (isComplex()) - in[iArray].im = vImag[ix][iy]; - else - in[iArray].im = 0; - iArray++; - } - - fftwnd_plan plan = fftw2d_create_plan (m_nx, m_ny, FFTW_FORWARD, FFTW_IN_PLACE); - - fftwnd_one (plan, in, NULL); - - ImageFileArray vRealResult = result.getArray(); - ImageFileArray vImagResult = result.getImaginaryArray(); - iArray = 0; - unsigned int iScale = m_nx * m_ny; - for (ix = 0; ix < m_nx; ix++) - for (iy = 0; iy < m_ny; iy++) { - vRealResult[ix][iy] = in[iArray].re / iScale; - vImagResult[ix][iy] = in[iArray].im / iScale; - iArray++; - } - - fftwnd_destroy_plan (plan); - delete in; - - - ProcessImage::shuffleFourierToNaturalOrder (result); - - return true; -} - - -bool -ImageFile::ifft (ImageFile& result) const -{ - if (m_nx != result.nx() || m_ny != result.ny()) { - sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); - return false; - } - - if (result.dataType() == Array2dFile::DATA_TYPE_REAL) { - if (! result.reallocRealToComplex ()) - return false; - } - - ImageFileArrayConst vReal = getArray(); - ImageFileArrayConst vImag = getImaginaryArray(); - ImageFileArray vRealResult = result.getArray(); - ImageFileArray vImagResult = result.getImaginaryArray(); - unsigned int ix, iy; - for (ix = 0; ix < m_nx; ix++) - for (iy = 0; iy < m_ny; iy++) { - vRealResult[ix][iy] = vReal[ix][iy]; - if (isComplex()) - vImagResult[ix][iy] = vImag[ix][iy]; - else - vImagResult[ix][iy] = 0; - } - - ProcessImage::shuffleNaturalToFourierOrder (result); - - fftw_complex* in = new fftw_complex [m_nx * m_ny]; - - unsigned int iArray = 0; - for (ix = 0; ix < m_nx; ix++) - for (iy = 0; iy < m_ny; iy++) { - in[iArray].re = vRealResult[ix][iy]; - in[iArray].im = vImagResult[ix][iy]; - iArray++; - } - - fftwnd_plan plan = fftw2d_create_plan (m_nx, m_ny, FFTW_BACKWARD, FFTW_IN_PLACE); - - fftwnd_one (plan, in, NULL); - - iArray = 0; - for (ix = 0; ix < m_nx; ix++) - for (iy = 0; iy < m_ny; iy++) { - vRealResult[ix][iy] = in[iArray].re; - vImagResult[ix][iy] = in[iArray].im; - iArray++; - } - - fftwnd_destroy_plan (plan); - - delete in; - - return true; -} -#endif // HAVE_FFTW - - - -bool -ImageFile::fourier (ImageFile& result) const -{ - if (m_nx != result.nx() || m_ny != result.ny()) { - sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); - return false; - } - - if (result.dataType() == Array2dFile::DATA_TYPE_REAL) { - if (! result.reallocRealToComplex ()) - return false; - } - - ImageFileArrayConst vLHS = getArray(); - ImageFileArrayConst vLHSImag = getImaginaryArray(); - ImageFileArray vRealResult = result.getArray(); - ImageFileArray vImagResult = result.getImaginaryArray(); - - unsigned int ix, iy; - - // alloc output matrix - CTSimComplex** complexOut = new CTSimComplex* [m_nx]; - for (ix = 0; ix < m_nx; ix++) - complexOut[ix] = new CTSimComplex [m_ny]; - - // fourier each x column -#if 1 - CTSimComplex* pY = new CTSimComplex [m_ny]; - for (ix = 0; ix < m_nx; ix++) { - for (iy = 0; iy < m_ny; iy++) { - pY[iy].real (vLHS[ix][iy]); - if (isComplex()) - pY[iy].imag (vLHSImag[ix][iy]); - else - pY[iy].imag (0); - } - ProcessSignal::finiteFourierTransform (pY, complexOut[ix], m_ny, ProcessSignal::FORWARD); - } -#else - double* pY = new double [m_ny]; - for (ix = 0; ix < m_nx; ix++) { - for (iy = 0; iy < m_ny; iy++) { - pY[iy] = vLHS[ix][iy]; - } - ProcessSignal::finiteFourierTransform (pY, complexOut[ix], m_ny, ProcessSignal::FORWARD); - } -#endif - delete [] pY; - - // fourier each y row - CTSimComplex* pX = new CTSimComplex [m_nx]; - CTSimComplex* complexOutRow = new CTSimComplex [m_nx]; - for (iy = 0; iy < m_ny; iy++) { - for (ix = 0; ix < m_nx; ix++) - pX[ix] = complexOut[ix][iy]; - ProcessSignal::finiteFourierTransform (pX, complexOutRow, m_nx, ProcessSignal::FORWARD); - for (ix = 0; ix < m_nx; ix++) - complexOut[ix][iy] = complexOutRow[ix]; - } - delete [] pX; - - // shuffle each column - for (ix = 0; ix < m_nx; ix++) - ProcessSignal::shuffleFourierToNaturalOrder (complexOut[ix], m_ny); - - // shuffle each row - for (iy = 0; iy < m_ny; iy++) { - for (ix = 0; ix < m_nx; ix++) - complexOutRow[ix] = complexOut[ix][iy]; - ProcessSignal::shuffleFourierToNaturalOrder (complexOutRow, m_nx);; - for (ix = 0; ix < m_nx; ix++) - complexOut[ix][iy] = complexOutRow[ix]; - - } - delete [] complexOutRow; - - for (ix = 0; ix < m_nx; ix++) - for (iy = 0; iy < m_ny; iy++) { - vRealResult[ix][iy] = complexOut[ix][iy].real(); - vImagResult[ix][iy] = complexOut[ix][iy].imag(); - } - - for (ix = 0; ix < m_nx; ix++) - delete [] complexOut[ix]; - delete [] complexOut; - - return true; -} - -bool -ImageFile::inverseFourier (ImageFile& result) const -{ - if (m_nx != result.nx() || m_ny != result.ny()) { - sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); - return false; - } - - if (result.dataType() == Array2dFile::DATA_TYPE_REAL) { - if (! result.reallocRealToComplex ()) - return false; - } - - ImageFileArrayConst vLHSReal = getArray(); - ImageFileArrayConst vLHSImag = getImaginaryArray(); - - unsigned int ix, iy; - - // alloc 2d complex output matrix - CTSimComplex** complexOut = new CTSimComplex* [m_nx]; - for (ix = 0; ix < m_nx; ix++) - complexOut[ix] = new CTSimComplex [m_ny]; - - // put input image into complexOut - for (ix = 0; ix < m_nx; ix++) - for (iy = 0; iy < m_ny; iy++) { - complexOut[ix][iy].real (vLHSReal[ix][iy]); - if (isComplex()) - complexOut[ix][iy].imag (vLHSImag[ix][iy]); - else - complexOut[ix][iy].imag (0); - } - - // shuffle each x column - for (ix = 0; ix < m_nx; ix++) - ProcessSignal::shuffleNaturalToFourierOrder (complexOut[ix], m_ny); - - // shuffle each y row - CTSimComplex* pComplexRow = new CTSimComplex [m_nx]; - for (iy = 0; iy < m_ny; iy++) { - for (ix = 0; ix < m_nx; ix++) - pComplexRow[ix] = complexOut[ix][iy]; - ProcessSignal::shuffleNaturalToFourierOrder (pComplexRow, m_nx); - for (ix = 0; ix < m_nx; ix++) - complexOut[ix][iy] = pComplexRow[ix]; - } - delete [] pComplexRow; - - // ifourier each x column - CTSimComplex* pCol = new CTSimComplex [m_ny]; - for (ix = 0; ix < m_nx; ix++) { - for (iy = 0; iy < m_ny; iy++) - pCol[iy] = complexOut[ix][iy]; - ProcessSignal::finiteFourierTransform (pCol, complexOut[ix], m_ny, ProcessSignal::BACKWARD); - } - delete [] pCol; - - // ifourier each y row - CTSimComplex* complexInRow = new CTSimComplex [m_nx]; - CTSimComplex* complexOutRow = new CTSimComplex [m_nx]; - for (iy = 0; iy < m_ny; iy++) { - for (ix = 0; ix < m_nx; ix++) - complexInRow[ix] = complexOut[ix][iy]; - ProcessSignal::finiteFourierTransform (complexInRow, complexOutRow, m_nx, ProcessSignal::BACKWARD); - for (ix = 0; ix < m_nx; ix++) - complexOut[ix][iy] = complexOutRow[ix]; - } - delete [] complexInRow; - delete [] complexOutRow; - - ImageFileArray vRealResult = result.getArray(); - ImageFileArray vImagResult = result.getImaginaryArray(); - for (ix = 0; ix < m_nx; ix++) - for (iy = 0; iy < m_ny; iy++) { - vRealResult[ix][iy] = complexOut[ix][iy].real(); - vImagResult[ix][iy] = complexOut[ix][iy].imag(); - } - - // delete complexOut matrix - for (ix = 0; ix < m_nx; ix++) - delete [] complexOut[ix]; - delete [] complexOut; - - return true; -} - - -bool -ImageFile::magnitude (ImageFile& result) const -{ - if (m_nx != result.nx() || m_ny != result.ny()) { - sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); - return false; - } - - ImageFileArray vReal = getArray(); - ImageFileArray vImag = getImaginaryArray(); - - ImageFileArray vRealResult = result.getArray(); - for (unsigned int ix = 0; ix < m_nx; ix++) - for (unsigned int iy = 0; iy < m_ny; iy++) { - if (isComplex()) - vRealResult[ix][iy] = ::sqrt (vReal[ix][iy] * vReal[ix][iy] + vImag[ix][iy] * vImag[ix][iy]); - else - vRealResult[ix][iy] = vReal[ix][iy]; - } - - if (result.isComplex()) - result.reallocComplexToReal(); - - return true; -} - -bool -ImageFile::phase (ImageFile& result) const -{ - if (m_nx != result.nx() || m_ny != result.ny()) { - sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); - return false; - } - - ImageFileArray vReal = getArray(); - ImageFileArray vImag = getImaginaryArray(); - - ImageFileArray vRealResult = result.getArray(); - for (unsigned int ix = 0; ix < m_nx; ix++) - for (unsigned int iy = 0; iy < m_ny; iy++) { - if (isComplex()) - vRealResult[ix][iy] = ::atan2 (vImag[ix][iy], vReal[ix][iy]); - else - vRealResult[ix][iy] = 0; - } - - if (result.isComplex()) - result.reallocComplexToReal(); - - return true; -} - -bool -ImageFile::square (ImageFile& result) const -{ - if (m_nx != result.nx() || m_ny != result.ny()) { - sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); - return false; - } - - ImageFileArrayConst vLHS = getArray(); - ImageFileArray vResult = result.getArray(); - - for (unsigned int ix = 0; ix < m_nx; ix++) { - ImageFileColumnConst in = vLHS[ix]; - ImageFileColumn out = vResult[ix]; - for (unsigned int iy = 0; iy < m_ny; iy++) { - *out++ = *in * *in; - in++; - } - } - - return true; -} - - -void -ImageFile::writeImagePGM (const char *outfile, int nxcell, int nycell, double densmin, double densmax) + +bool +ImageFile::convertRealToComplex () +{ + if (dataType() != Array2dFile::DATA_TYPE_REAL) + return false; + + if (! reallocRealToComplex()) + return false; + + ImageFileArray vImag = getImaginaryArray(); + for (unsigned int ix = 0; ix < m_nx; ix++) { + ImageFileColumn vCol = vImag[ix]; + for (unsigned int iy = 0; iy < m_ny; iy++) + *vCol++ = 0; + } + + return true; +} + +bool +ImageFile::convertComplexToReal () +{ + if (dataType() != Array2dFile::DATA_TYPE_COMPLEX) + return false; + + ImageFileArray vReal = getArray(); + ImageFileArray vImag = getImaginaryArray(); + for (unsigned int ix = 0; ix < m_nx; ix++) { + ImageFileColumn vRealCol = vReal[ix]; + ImageFileColumn vImagCol = vImag[ix]; + for (unsigned int iy = 0; iy < m_ny; iy++) { + CTSimComplex c (*vRealCol, *vImagCol); + *vRealCol++ = std::abs (c); + vImagCol++; + } + } + + return reallocComplexToReal(); +} + +bool +ImageFile::subtractImages (const ImageFile& rRHS, ImageFile& result) const +{ + if (m_nx != rRHS.nx() || m_ny != rRHS.ny() || m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::subtractImage]"); + return false; + } + + if (isComplex() || rRHS.isComplex() && ! result.isComplex()) + result.convertRealToComplex(); + + ImageFileArrayConst vLHS = getArray(); + ImageFileArrayConst vLHSImag = getImaginaryArray(); + ImageFileArrayConst vRHS = rRHS.getArray(); + ImageFileArrayConst vRHSImag = rRHS.getImaginaryArray(); + ImageFileArray vResult = result.getArray(); + ImageFileArray vResultImag = result.getImaginaryArray(); + + for (unsigned int ix = 0; ix < m_nx; ix++) { + for (unsigned int iy = 0; iy < m_ny; iy++) { + vResult[ix][iy] = vLHS[ix][iy] - vRHS[ix][iy]; + if (result.isComplex()) { + vResultImag[ix][iy] = 0; + if (isComplex()) + vResultImag[ix][iy] += vLHSImag[ix][iy]; + if (rRHS.isComplex()) + vResultImag[ix][iy] -= vRHSImag[ix][iy]; + } + } + } + + return true; +} + +bool +ImageFile::addImages (const ImageFile& rRHS, ImageFile& result) const +{ + if (m_nx != rRHS.nx() || m_ny != rRHS.ny() || m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::subtractImage]"); + return false; + } + + if (isComplex() || rRHS.isComplex() && ! result.isComplex()) + result.convertRealToComplex(); + + ImageFileArrayConst vLHS = getArray(); + ImageFileArrayConst vLHSImag = getImaginaryArray(); + ImageFileArrayConst vRHS = rRHS.getArray(); + ImageFileArrayConst vRHSImag = rRHS.getImaginaryArray(); + ImageFileArray vResult = result.getArray(); + ImageFileArray vResultImag = result.getImaginaryArray(); + + for (unsigned int ix = 0; ix < m_nx; ix++) { + for (unsigned int iy = 0; iy < m_ny; iy++) { + vResult[ix][iy] = vLHS[ix][iy] + vRHS[ix][iy]; + if (result.isComplex()) { + vResultImag[ix][iy] = 0; + if (isComplex()) + vResultImag[ix][iy] += vLHSImag[ix][iy]; + if (rRHS.isComplex()) + vResultImag[ix][iy] += vRHSImag[ix][iy]; + } + } + } + + return true; +} + +bool +ImageFile::multiplyImages (const ImageFile& rRHS, ImageFile& result) const +{ + if (m_nx != rRHS.nx() || m_ny != rRHS.ny() || m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::subtractImage]"); + return false; + } + + if (isComplex() || rRHS.isComplex() && ! result.isComplex()) + result.convertRealToComplex(); + + ImageFileArrayConst vLHS = getArray(); + ImageFileArrayConst vLHSImag = getImaginaryArray(); + ImageFileArrayConst vRHS = rRHS.getArray(); + ImageFileArrayConst vRHSImag = rRHS.getImaginaryArray(); + ImageFileArray vResult = result.getArray(); + ImageFileArray vResultImag = result.getImaginaryArray(); + + for (unsigned int ix = 0; ix < m_nx; ix++) { + for (unsigned int iy = 0; iy < m_ny; iy++) { + if (result.isComplex()) { + double dImag = 0; + if (isComplex()) + dImag = vLHSImag[ix][iy]; + std::complex cLHS (vLHS[ix][iy], dImag); + dImag = 0; + if (rRHS.isComplex()) + dImag = vRHSImag[ix][iy]; + std::complex cRHS (vRHS[ix][iy], dImag); + std::complex cResult = cLHS * cRHS; + vResult[ix][iy] = cResult.real(); + vResultImag[ix][iy] = cResult.imag(); + } else + vResult[ix][iy] = vLHS[ix][iy] * vRHS[ix][iy]; + } + } + + + return true; +} + +bool +ImageFile::divideImages (const ImageFile& rRHS, ImageFile& result) const +{ + if (m_nx != rRHS.nx() || m_ny != rRHS.ny() || m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::subtractImage]"); + return false; + } + + if (isComplex() || rRHS.isComplex() && ! result.isComplex()) + result.convertRealToComplex(); + + ImageFileArrayConst vLHS = getArray(); + ImageFileArrayConst vLHSImag = getImaginaryArray(); + ImageFileArrayConst vRHS = rRHS.getArray(); + ImageFileArrayConst vRHSImag = rRHS.getImaginaryArray(); + ImageFileArray vResult = result.getArray(); + ImageFileArray vResultImag = result.getImaginaryArray(); + + for (unsigned int ix = 0; ix < m_nx; ix++) { + for (unsigned int iy = 0; iy < m_ny; iy++) { + if (result.isComplex()) { + double dImag = 0; + if (isComplex()) + dImag = vLHSImag[ix][iy]; + std::complex cLHS (vLHS[ix][iy], dImag); + dImag = 0; + if (rRHS.isComplex()) + dImag = vRHSImag[ix][iy]; + std::complex cRHS (vRHS[ix][iy], dImag); + std::complex cResult = cLHS / cRHS; + vResult[ix][iy] = cResult.real(); + vResultImag[ix][iy] = cResult.imag(); + } else { + if (vRHS != 0) + vResult[ix][iy] = vLHS[ix][iy] / vRHS[ix][iy]; + else + vResult[ix][iy] = 0; + } + } + } + + return true; +} + + +bool +ImageFile::invertPixelValues (ImageFile& result) const +{ + if (m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); + return false; + } + + if (isComplex() && ! result.isComplex()) + result.convertRealToComplex(); + + ImageFileArrayConst vLHS = getArray(); + ImageFileArray vResult = result.getArray(); + + for (unsigned int ix = 0; ix < m_nx; ix++) { + ImageFileColumnConst in = vLHS[ix]; + ImageFileColumn out = vResult[ix]; + for (unsigned int iy = 0; iy < m_ny; iy++) + *out++ = - *in++; + } + + return true; +} + +bool +ImageFile::sqrt (ImageFile& result) const +{ + if (m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); + return false; + } + + if (isComplex() && ! result.isComplex()) + result.convertRealToComplex(); + + bool bComplexOutput = result.isComplex(); + ImageFileArrayConst vLHS = getArray(); + if (! bComplexOutput) // check if should convert to complex output + for (unsigned int ix = 0; ix < m_nx; ix++) + for (unsigned int iy = 0; iy < m_ny; iy++) + if (! bComplexOutput && vLHS[ix][iy] < 0) { + result.convertRealToComplex(); + bComplexOutput = true; + break; + } + + ImageFileArrayConst vLHSImag = getImaginaryArray(); + ImageFileArray vResult = result.getArray(); + ImageFileArray vResultImag = result.getImaginaryArray(); + + for (unsigned int ix = 0; ix < m_nx; ix++) { + for (unsigned int iy = 0; iy < m_ny; iy++) { + if (result.isComplex()) { + double dImag = 0; + if (isComplex()) + dImag = vLHSImag[ix][iy]; + std::complex cLHS (vLHS[ix][iy], dImag); + std::complex cResult = std::sqrt(cLHS); + vResult[ix][iy] = cResult.real(); + vResultImag[ix][iy] = cResult.imag(); + } else + vResult[ix][iy] = ::sqrt (vLHS[ix][iy]); + } + } + + + return true; +} + +bool +ImageFile::log (ImageFile& result) const +{ + if (m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); + return false; + } + + if (isComplex() && ! result.isComplex()) + result.convertRealToComplex(); + + ImageFileArrayConst vLHS = getArray(); + ImageFileArrayConst vLHSImag = getImaginaryArray(); + ImageFileArray vResult = result.getArray(); + ImageFileArray vResultImag = result.getImaginaryArray(); + + for (unsigned int ix = 0; ix < m_nx; ix++) { + for (unsigned int iy = 0; iy < m_ny; iy++) { + if (result.isComplex()) { + double dImag = 0; + if (isComplex()) + dImag = vLHSImag[ix][iy]; + std::complex cLHS (vLHS[ix][iy], dImag); + std::complex cResult = std::log (cLHS); + vResult[ix][iy] = cResult.real(); + vResultImag[ix][iy] = cResult.imag(); + } else + vResult[ix][iy] = ::log (vLHS[ix][iy]); + } + } + + + return true; +} + +bool +ImageFile::exp (ImageFile& result) const +{ + if (m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); + return false; + } + + if (isComplex() && ! result.isComplex()) + result.convertRealToComplex(); + + ImageFileArrayConst vLHS = getArray(); + ImageFileArrayConst vLHSImag = getImaginaryArray(); + ImageFileArray vResult = result.getArray(); + ImageFileArray vResultImag = result.getImaginaryArray(); + + for (unsigned int ix = 0; ix < m_nx; ix++) { + for (unsigned int iy = 0; iy < m_ny; iy++) { + if (result.isComplex()) { + double dImag = 0; + if (isComplex()) + dImag = vLHSImag[ix][iy]; + std::complex cLHS (vLHS[ix][iy], dImag); + std::complex cResult = std::exp (cLHS); + vResult[ix][iy] = cResult.real(); + vResultImag[ix][iy] = cResult.imag(); + } else + vResult[ix][iy] = ::exp (vLHS[ix][iy]); + } + } + + + return true; +} + +bool +ImageFile::scaleImage (ImageFile& result) const +{ + unsigned int nx = m_nx; + unsigned int ny = m_ny; + unsigned int newNX = result.nx(); + unsigned int newNY = result.ny(); + + double dXScale = static_cast(newNX) / static_cast(nx); + double dYScale = static_cast(newNY) / static_cast(ny); + + if (isComplex() && ! result.isComplex()) + result.convertRealToComplex(); + + ImageFileArrayConst vReal = getArray(); + ImageFileArrayConst vImag = getImaginaryArray(); + ImageFileArray vResult = result.getArray(); + ImageFileArray vResultImag = result.getImaginaryArray(); + + for (unsigned int ix = 0; ix < newNX; ix++) { + for (unsigned int iy = 0; iy < newNY; iy++) { + double dXPos = ix / dXScale; + double dYPos = iy / dYScale; + unsigned int scaleNX = static_cast (dXPos); + unsigned int scaleNY = static_cast (dYPos); + double dXFrac = dXPos - scaleNX; + double dYFrac = dYPos - scaleNY; + if (scaleNX >= nx - 1 || scaleNY >= ny - 1) { + vResult[ix][iy] = vReal[scaleNX][scaleNY]; + if (result.isComplex()) { + if (isComplex()) + vResultImag[ix][iy] = vImag[scaleNX][scaleNY]; + else + vResultImag[ix][iy] = 0; + } + } else { + vResult[ix][iy] = (1 - dXFrac) * (1 - dYFrac) * vReal[scaleNX][scaleNY] + + dXFrac * (1 - dYFrac) * vReal[scaleNX+1][scaleNY] + + dYFrac * (1 - dXFrac) * vReal[scaleNX][scaleNY+1] + + dXFrac * dYFrac * vReal[scaleNX+1][scaleNY+1]; + if (result.isComplex()) { + if (isComplex()) + vResultImag[ix][iy] = (1 - dXFrac) * (1 - dYFrac) * vImag[scaleNX][scaleNY] + + dXFrac * (1 - dYFrac) * vImag[scaleNX+1][scaleNY] + + dYFrac * (1 - dXFrac) * vImag[scaleNX][scaleNY+1] + + dXFrac * dYFrac * vImag[scaleNX+1][scaleNY+1]; + else + vResultImag[ix][iy] = 0; + } + } + } + } + + return true; +} + +#ifdef HAVE_FFTW +bool +ImageFile::fft (ImageFile& result) const +{ + if (m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); + return false; + } + + if (result.dataType() == Array2dFile::DATA_TYPE_REAL) { + if (! result.convertRealToComplex ()) + return false; + } + + fftw_complex* in = new fftw_complex [m_nx * m_ny]; + + ImageFileArrayConst vReal = getArray(); + ImageFileArrayConst vImag = getImaginaryArray(); + + unsigned int ix, iy; + unsigned int iArray = 0; + for (ix = 0; ix < m_nx; ix++) + for (iy = 0; iy < m_ny; iy++) { + in[iArray].re = vReal[ix][iy]; + if (isComplex()) + in[iArray].im = vImag[ix][iy]; + else + in[iArray].im = 0; + iArray++; + } + + fftwnd_plan plan = fftw2d_create_plan (m_nx, m_ny, FFTW_FORWARD, FFTW_IN_PLACE); + + fftwnd_one (plan, in, NULL); + + ImageFileArray vRealResult = result.getArray(); + ImageFileArray vImagResult = result.getImaginaryArray(); + iArray = 0; + unsigned int iScale = m_nx * m_ny; + for (ix = 0; ix < m_nx; ix++) + for (iy = 0; iy < m_ny; iy++) { + vRealResult[ix][iy] = in[iArray].re / iScale; + vImagResult[ix][iy] = in[iArray].im / iScale; + iArray++; + } + + fftwnd_destroy_plan (plan); + delete in; + + + Fourier::shuffleFourierToNaturalOrder (result); + + return true; +} + + +bool +ImageFile::ifft (ImageFile& result) const +{ + if (m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); + return false; + } + + if (result.dataType() == Array2dFile::DATA_TYPE_REAL) { + if (! result.convertRealToComplex ()) + return false; + } + + ImageFileArrayConst vReal = getArray(); + ImageFileArrayConst vImag = getImaginaryArray(); + ImageFileArray vRealResult = result.getArray(); + ImageFileArray vImagResult = result.getImaginaryArray(); + unsigned int ix, iy; + for (ix = 0; ix < m_nx; ix++) + for (iy = 0; iy < m_ny; iy++) { + vRealResult[ix][iy] = vReal[ix][iy]; + if (isComplex()) + vImagResult[ix][iy] = vImag[ix][iy]; + else + vImagResult[ix][iy] = 0; + } + + Fourier::shuffleNaturalToFourierOrder (result); + + fftw_complex* in = new fftw_complex [m_nx * m_ny]; + + unsigned int iArray = 0; + for (ix = 0; ix < m_nx; ix++) + for (iy = 0; iy < m_ny; iy++) { + in[iArray].re = vRealResult[ix][iy]; + in[iArray].im = vImagResult[ix][iy]; + iArray++; + } + + fftwnd_plan plan = fftw2d_create_plan (m_nx, m_ny, FFTW_BACKWARD, FFTW_IN_PLACE); + + fftwnd_one (plan, in, NULL); + + iArray = 0; + for (ix = 0; ix < m_nx; ix++) + for (iy = 0; iy < m_ny; iy++) { + vRealResult[ix][iy] = in[iArray].re; + vImagResult[ix][iy] = in[iArray].im; + iArray++; + } + + fftwnd_destroy_plan (plan); + + delete in; + + return true; +} + +bool +ImageFile::fftRows (ImageFile& result) const +{ + if (m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::fftRows]"); + return false; + } + + if (result.dataType() == Array2dFile::DATA_TYPE_REAL) { + if (! result.convertRealToComplex ()) + return false; + } + + fftw_complex* in = new fftw_complex [m_nx]; + + ImageFileArrayConst vReal = getArray(); + ImageFileArrayConst vImag = getImaginaryArray(); + + fftw_plan plan = fftw_create_plan (m_nx, FFTW_FORWARD, FFTW_IN_PLACE); + std::complex* pcRow = new std::complex [m_nx]; + + unsigned int ix, iy; + unsigned int iArray = 0; + for (iy = 0; iy < m_ny; iy++) { + for (ix = 0; ix < m_nx; ix++) { + in[ix].re = vReal[ix][iy]; + if (isComplex()) + in[ix].im = vImag[ix][iy]; + else + in[ix].im = 0; + } + + fftw_one (plan, in, NULL); + + for (ix = 0; ix < m_nx; ix++) + pcRow[ix] = std::complex(in[ix].re, in[ix].im); + + Fourier::shuffleFourierToNaturalOrder (pcRow, m_nx); + for (ix = 0; ix < m_nx; ix++) { + vReal[ix][iy] = pcRow[ix].real(); + vImag[ix][iy] = pcRow[ix].imag(); + } + } + delete [] pcRow; + + fftw_destroy_plan (plan); + delete in; + + return true; +} + +bool +ImageFile::ifftRows (ImageFile& result) const +{ + if (m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::fftRows]"); + return false; + } + + if (result.dataType() == Array2dFile::DATA_TYPE_REAL) { + if (! result.convertRealToComplex ()) + return false; + } + + fftw_complex* in = new fftw_complex [m_nx]; + + ImageFileArrayConst vReal = getArray(); + ImageFileArrayConst vImag = getImaginaryArray(); + + fftw_plan plan = fftw_create_plan (m_nx, FFTW_BACKWARD, FFTW_IN_PLACE); + std::complex* pcRow = new std::complex [m_nx]; + + unsigned int ix, iy; + unsigned int iArray = 0; + for (iy = 0; iy < m_ny; iy++) { + for (ix = 0; ix < m_nx; ix++) { + double dImag = 0; + if (isComplex()) + dImag = vImag[ix][iy]; + pcRow[ix] = std::complex (vReal[ix][iy], dImag); + } + + Fourier::shuffleNaturalToFourierOrder (pcRow, m_nx); + + for (ix = 0; ix < m_nx; ix++) { + in[ix].re = pcRow[ix].real(); + in[ix].im = pcRow[ix].imag(); + } + + fftw_one (plan, in, NULL); + + for (ix = 0; ix < m_nx; ix++) { + vReal[ix][iy] = in[ix].re; + vImag[ix][iy] = in[ix].im; + } + } + delete [] pcRow; + + fftw_destroy_plan (plan); + delete in; + + return true; +} + +bool +ImageFile::fftCols (ImageFile& result) const +{ + return false; +} + +bool +ImageFile::ifftCols (ImageFile& result) const +{ + return false; +} + +#endif // HAVE_FFTW + + + +bool +ImageFile::fourier (ImageFile& result) const +{ + if (m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); + return false; + } + + if (! result.isComplex()) + if (! result.convertRealToComplex ()) + return false; + + ImageFileArrayConst vLHS = getArray(); + ImageFileArrayConst vLHSImag = getImaginaryArray(); + ImageFileArray vRealResult = result.getArray(); + ImageFileArray vImagResult = result.getImaginaryArray(); + + unsigned int ix, iy; + + // alloc output matrix + CTSimComplex** complexOut = new CTSimComplex* [m_nx]; + for (ix = 0; ix < m_nx; ix++) + complexOut[ix] = new CTSimComplex [m_ny]; + + // fourier each x column + CTSimComplex* pY = new CTSimComplex [m_ny]; + for (ix = 0; ix < m_nx; ix++) { + for (iy = 0; iy < m_ny; iy++) { + double dImag = 0; + if (isComplex()) + dImag = vLHSImag[ix][iy]; + pY[iy] = std::complex(vLHS[ix][iy], dImag); + } + ProcessSignal::finiteFourierTransform (pY, complexOut[ix], m_ny, ProcessSignal::FORWARD); + } + delete [] pY; + + // fourier each y row + CTSimComplex* pX = new CTSimComplex [m_nx]; + CTSimComplex* complexOutRow = new CTSimComplex [m_nx]; + for (iy = 0; iy < m_ny; iy++) { + for (ix = 0; ix < m_nx; ix++) + pX[ix] = complexOut[ix][iy]; + ProcessSignal::finiteFourierTransform (pX, complexOutRow, m_nx, ProcessSignal::FORWARD); + for (ix = 0; ix < m_nx; ix++) + complexOut[ix][iy] = complexOutRow[ix]; + } + delete [] pX; + delete [] complexOutRow; + + for (ix = 0; ix < m_nx; ix++) + for (iy = 0; iy < m_ny; iy++) { + vRealResult[ix][iy] = complexOut[ix][iy].real(); + vImagResult[ix][iy] = complexOut[ix][iy].imag(); + } + + Fourier::shuffleFourierToNaturalOrder (result); + + // delete complexOut matrix + for (ix = 0; ix < m_nx; ix++) + delete [] complexOut[ix]; + delete [] complexOut; + + return true; +} + +bool +ImageFile::inverseFourier (ImageFile& result) const +{ + if (m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); + return false; + } + + if (result.dataType() == Array2dFile::DATA_TYPE_REAL) { + if (! result.convertRealToComplex ()) + return false; + } + + ImageFileArrayConst vLHSReal = getArray(); + ImageFileArrayConst vLHSImag = getImaginaryArray(); + ImageFileArray vRealResult = result.getArray(); + ImageFileArray vImagResult = result.getImaginaryArray(); + + unsigned int ix, iy; + // alloc 2d complex output matrix + CTSimComplex** complexOut = new CTSimComplex* [m_nx]; + for (ix = 0; ix < m_nx; ix++) + complexOut[ix] = new CTSimComplex [m_ny]; + + // put input image into result + for (ix = 0; ix < m_nx; ix++) + for (iy = 0; iy < m_ny; iy++) { + vRealResult[ix][iy] = vLHSReal[ix][iy]; + if (isComplex()) + vImagResult[ix][iy] = vLHSImag[ix][iy]; + else + vImagResult[ix][iy] = 0; + } + + Fourier::shuffleNaturalToFourierOrder (result); + + // ifourier each x column + CTSimComplex* pCol = new CTSimComplex [m_ny]; + for (ix = 0; ix < m_nx; ix++) { + for (iy = 0; iy < m_ny; iy++) { + pCol[iy] = std::complex (vRealResult[ix][iy], vImagResult[ix][iy]); + } + ProcessSignal::finiteFourierTransform (pCol, complexOut[ix], m_ny, ProcessSignal::BACKWARD); + } + delete [] pCol; + + // ifourier each y row + CTSimComplex* complexInRow = new CTSimComplex [m_nx]; + CTSimComplex* complexOutRow = new CTSimComplex [m_nx]; + for (iy = 0; iy < m_ny; iy++) { + for (ix = 0; ix < m_nx; ix++) + complexInRow[ix] = complexOut[ix][iy]; + ProcessSignal::finiteFourierTransform (complexInRow, complexOutRow, m_nx, ProcessSignal::BACKWARD); + for (ix = 0; ix < m_nx; ix++) + complexOut[ix][iy] = complexOutRow[ix]; + } + delete [] complexInRow; + delete [] complexOutRow; + + for (ix = 0; ix < m_nx; ix++) + for (iy = 0; iy < m_ny; iy++) { + vRealResult[ix][iy] = complexOut[ix][iy].real(); + vImagResult[ix][iy] = complexOut[ix][iy].imag(); + } + + // delete complexOut matrix + for (ix = 0; ix < m_nx; ix++) + delete [] complexOut[ix]; + delete [] complexOut; + + return true; +} + + +bool +ImageFile::magnitude (ImageFile& result) const +{ + if (m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); + return false; + } + + ImageFileArray vReal = getArray(); + ImageFileArray vImag = getImaginaryArray(); + ImageFileArray vRealResult = result.getArray(); + + for (unsigned int ix = 0; ix < m_nx; ix++) + for (unsigned int iy = 0; iy < m_ny; iy++) { + if (isComplex()) + vRealResult[ix][iy] = ::sqrt (vReal[ix][iy] * vReal[ix][iy] + vImag[ix][iy] * vImag[ix][iy]); + else + vRealResult[ix][iy] = vReal[ix][iy]; + } + + if (result.isComplex()) + result.convertComplexToReal(); + + return true; +} + +bool +ImageFile::phase (ImageFile& result) const +{ + if (m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); + return false; + } + + ImageFileArray vReal = getArray(); + ImageFileArray vImag = getImaginaryArray(); + ImageFileArray vRealResult = result.getArray(); + + for (unsigned int ix = 0; ix < m_nx; ix++) + for (unsigned int iy = 0; iy < m_ny; iy++) { + if (isComplex()) + vRealResult[ix][iy] = ::atan2 (vImag[ix][iy], vReal[ix][iy]); + else + vRealResult[ix][iy] = 0; + } + + if (result.isComplex()) + result.convertComplexToReal(); + + return true; +} + +bool +ImageFile::square (ImageFile& result) const +{ + if (m_nx != result.nx() || m_ny != result.ny()) { + sys_error (ERR_WARNING, "Difference sizes of images [ImageFile::invertPixelValues]"); + return false; + } + + if (isComplex() && ! result.isComplex()) + result.convertRealToComplex(); + + ImageFileArrayConst vLHS = getArray(); + ImageFileArrayConst vLHSImag = getImaginaryArray(); + ImageFileArray vResult = result.getArray(); + ImageFileArray vResultImag = result.getImaginaryArray(); + + for (unsigned int ix = 0; ix < m_nx; ix++) { + for (unsigned int iy = 0; iy < m_ny; iy++) { + if (result.isComplex()) { + double dImag = 0; + if (isComplex()) + dImag = vLHSImag[ix][iy]; + std::complex cLHS (vLHS[ix][iy], dImag); + std::complex cResult = cLHS * cLHS; + vResult[ix][iy] = cResult.real(); + vResultImag[ix][iy] = cResult.imag(); + } else + vResult[ix][iy] = vLHS[ix][iy] * vLHS[ix][iy]; + } + } + + + return true; +} + +int +ImageFile::convertFormatNameToID (const char* const formatName) +{ + int formatID = FORMAT_INVALID; + + for (int i = 0; i < s_iFormatCount; i++) + if (strcasecmp (formatName, s_aszFormatName[i]) == 0) { + formatID = i; + break; + } + + return (formatID); +} + +const char* +ImageFile::convertFormatIDToName (int formatID) +{ + static const char *formatName = ""; + + if (formatID >= 0 && formatID < s_iFormatCount) + return (s_aszFormatName[formatID]); + + return (formatName); +} + +const char* +ImageFile::convertFormatIDToTitle (const int formatID) +{ + static const char *formatTitle = ""; + + if (formatID >= 0 && formatID < s_iFormatCount) + return (s_aszFormatTitle[formatID]); + + return (formatTitle); +} + +bool +ImageFile::exportImage (const char* const pszFormat, const char* const pszFilename, int nxcell, int nycell, double densmin, double densmax) +{ + int iFormatID = convertFormatNameToID (pszFormat); + if (iFormatID == FORMAT_INVALID) { + sys_error (ERR_SEVERE, "Invalid format %s [ImageFile::exportImage]", pszFormat); + return false; + } + + if (iFormatID == FORMAT_PGM) + return writeImagePGM (pszFilename, nxcell, nycell, densmin, densmax); + else if (iFormatID == FORMAT_PGMASCII) + return writeImagePGMASCII (pszFilename, nxcell, nycell, densmin, densmax); + else if (iFormatID == FORMAT_PNG) + return writeImagePNG (pszFilename, 8, nxcell, nycell, densmin, densmax); + else if (iFormatID == FORMAT_PNG16) + return writeImagePNG (pszFilename, 16, nxcell, nycell, densmin, densmax); + + sys_error (ERR_SEVERE, "Invalid format %s [ImageFile::exportImage]", pszFormat); + return false; +} + +bool +ImageFile::writeImagePGM (const char* const outfile, int nxcell, int nycell, double densmin, double densmax) { FILE *fp; int nx = m_nx; @@ -990,7 +1251,7 @@ ImageFile::writeImagePGM (const char *outfile, int nxcell, int nycell, double de unsigned char* rowp = new unsigned char [nx * nxcell]; if ((fp = fopen (outfile, "wb")) == NULL) - return; + return false; fprintf(fp, "P5\n"); fprintf(fp, "%d %d\n", nx, ny); @@ -1010,13 +1271,15 @@ ImageFile::writeImagePGM (const char *outfile, int nxcell, int nycell, double de fputc( rowp[ic], fp ); } } - + delete rowp; fclose(fp); + + return true; } -void -ImageFile::writeImagePGMASCII (const char *outfile, int nxcell, int nycell, double densmin, double densmax) +bool +ImageFile::writeImagePGMASCII (const char* const outfile, int nxcell, int nycell, double densmin, double densmax) { FILE *fp; int nx = m_nx; @@ -1026,7 +1289,7 @@ ImageFile::writeImagePGMASCII (const char *outfile, int nxcell, int nycell, doub unsigned char* rowp = new unsigned char [nx * nxcell]; if ((fp = fopen (outfile, "wb")) == NULL) - return; + return false; fprintf(fp, "P2\n"); fprintf(fp, "%d %d\n", nx, ny); @@ -1047,19 +1310,18 @@ ImageFile::writeImagePGMASCII (const char *outfile, int nxcell, int nycell, doub fprintf(fp, "\n"); } } - + delete rowp; fclose(fp); + + return true; } #ifdef HAVE_PNG -void -ImageFile::writeImagePNG (const char *outfile, int bitdepth, int nxcell, int nycell, double densmin, double densmax) +bool +ImageFile::writeImagePNG (const char* const outfile, int bitdepth, int nxcell, int nycell, double densmin, double densmax) { - FILE *fp; - png_structp png_ptr; - png_infop info_ptr; double max_out_level = (1 << bitdepth) - 1; int nx = m_nx; int ny = m_ny; @@ -1067,29 +1329,30 @@ ImageFile::writeImagePNG (const char *outfile, int bitdepth, int nxcell, int nyc unsigned char* rowp = new unsigned char [nx * nxcell * (bitdepth / 8)]; - if ((fp = fopen (outfile, "wb")) == NULL) - return; + FILE *fp = fopen (outfile, "wb"); + if (! fp) + return false; - png_ptr = png_create_write_struct (PNG_LIBPNG_VER_STRING, NULL, NULL, NULL); + png_structp png_ptr = png_create_write_struct (PNG_LIBPNG_VER_STRING, NULL, NULL, NULL); if (! png_ptr) - return; + return false; - info_ptr = png_create_info_struct(png_ptr); + png_infop info_ptr = png_create_info_struct (png_ptr); if (! info_ptr) { - png_destroy_write_struct(&png_ptr, (png_infopp) NULL); - fclose(fp); - return; + png_destroy_write_struct (&png_ptr, (png_infopp) NULL); + fclose (fp); + return false; } - if (setjmp(png_ptr->jmpbuf)) { - png_destroy_write_struct(&png_ptr, &info_ptr); - fclose(fp); - return; + if (setjmp (png_ptr->jmpbuf)) { + png_destroy_write_struct (&png_ptr, &info_ptr); + fclose (fp); + return false; } png_init_io(png_ptr, fp); - png_set_IHDR(png_ptr, info_ptr, nx * nxcell, ny * nycell, bitdepth, PNG_COLOR_TYPE_GRAY, PNG_INTERLACE_NONE, PNG_COMPRESSION_TYPE_BASE, PNG_FILTER_TYPE_DEFAULT); + png_set_IHDR (png_ptr, info_ptr, nx * nxcell, ny * nycell, bitdepth, PNG_COLOR_TYPE_GRAY, PNG_INTERLACE_NONE, PNG_COMPRESSION_TYPE_BASE, PNG_FILTER_TYPE_DEFAULT); png_write_info(png_ptr, info_ptr); for (int irow = ny - 1; irow >= 0; irow--) { @@ -1106,8 +1369,8 @@ ImageFile::writeImagePNG (const char *outfile, int bitdepth, int nxcell, int nyc rowp[p] = outval; else { int rowpos = p * 2; - rowp[rowpos] = (outval >> 8) & 0xFF; - rowp[rowpos+1] = (outval & 0xFF); + rowp[rowpos+1] = (outval >> 8) & 0xFF; + rowp[rowpos] = (outval & 0xFF); } } } @@ -1115,11 +1378,13 @@ ImageFile::writeImagePNG (const char *outfile, int bitdepth, int nxcell, int nyc png_write_rows (png_ptr, &row_pointer, 1); } - png_write_end(png_ptr, info_ptr); - png_destroy_write_struct(&png_ptr, &info_ptr); - delete rowp; + png_write_end (png_ptr, info_ptr); + png_destroy_write_struct (&png_ptr, &info_ptr); + delete rowp; fclose(fp); + + return true; } #endif @@ -1127,21 +1392,17 @@ ImageFile::writeImagePNG (const char *outfile, int bitdepth, int nxcell, int nyc #include "gd.h" static const int N_GRAYSCALE=256; -void -ImageFile::writeImageGIF (const char *outfile, int nxcell, int nycell, double densmin, double densmax) +bool +ImageFile::writeImageGIF (const char* const outfile, int nxcell, int nycell, double densmin, double densmax) { - gdImagePtr gif; - FILE *out; int gs_indices[N_GRAYSCALE]; int nx = m_nx; int ny = m_ny; ImageFileArray v = getArray(); - unsigned char rowp [nx * nxcell]; - if (rowp == NULL) - return; + unsigned char* rowp = new unsigned char [nx * nxcell]; - gif = gdImageCreate(nx * nxcell, ny * nycell); + gdImagePtr gif = gdImageCreate(nx * nxcell, ny * nycell); for (int i = 0; i < N_GRAYSCALE; i++) gs_indices[i] = gdImageColorAllocate(gif, i, i, i); @@ -1161,13 +1422,18 @@ ImageFile::writeImageGIF (const char *outfile, int nxcell, int nycell, double de } } - if ((out = fopen(outfile,"w")) == NULL) { - sys_error(ERR_FATAL, "Error opening output file %s for writing", outfile); - return (1); + FILE *out; + if ((out = fopen (outfile,"w")) == NULL) { + sys_error(ERR_SEVERE, "Error opening output file %s for writing", outfile); + return false; } gdImageGif(gif,out); fclose(out); gdImageDestroy(gif); + + delete rowp; + + return true; } #endif