X-Git-Url: http://git.kpe.io/?p=ctsim.git;a=blobdiff_plain;f=src%2Fsample-ctrec.sh.in;h=11809a2680be4c65d9f5b8c423faa87846512c70;hp=f1485da8a6c6d9be53b843a6fa387e8426e8916c;hb=f4a23943110823118f35756dd41fbd6707f04511;hpb=931d1a7f12bb4ec7895c4b1300bd7df2ce758497

diff --git a/src/sample-ctrec.sh.in b/src/sample-ctrec.sh.in
index f1485da..11809a2 100755
--- a/src/sample-ctrec.sh.in
+++ b/src/sample-ctrec.sh.in
@@ -8,27 +8,27 @@ fi
 
 # Generate phantom image
 
-${bin}phm2sdf sample-phm.sdf 256 256 --nsample 2 --phantom herman
-if [ -f sample-phm.sdf ] ; then
-  ${bin}sdf2img sample-phm.sdf sample-phm.png --format png
-  ${bin}sdf2img sample-phm.sdf sample-phm16.png --format png16
+${bin}phm2if sample-phm.if 256 256 --nsample 2 --phantom herman
+if [ -f sample-phm.if ] ; then
+  ${bin}if2img sample-phm.if sample-phm.png --format png
+  ${bin}if2img sample-phm.if sample-phm16.png --format png16
 fi
 
 # Simulate CT data collection and generate raysum sinugram for display
-${bin}phm2rs  sample-rs.rs 367 320 --nray 2  --phantom herman
-if [ -f sample-rs.rs ]; then
-  ${bin}rs2sdf  sample-rs.rs sample-rs.sdf
+${bin}phm2pj  sample-pj.pj 367 320 --nray 2  --phantom herman
+if [ -f sample-pj.pj ]; then
+  ${bin}pj2if  sample-pj.pj sample-pj.if
 fi
-if [ -f sample-rs.sdf ]; then
-  ${bin}sdf2img sample-rs.sdf sample-rs.png --format png
-  ${bin}sdf2img sample-rs.sdf sample-rs16.png --format png16
+if [ -f sample-pj.if ]; then
+  ${bin}if2img sample-pj.if sample-pj.png --format png
+  ${bin}if2img sample-pj.if sample-pj16.png --format png16
 fi
 
 # Reconstruct raysums and generate image for display
-${bin}ctrec   sample-rs.rs sample-rec.sdf 256 256 
-if [ -f sample-rec.sdf ]; then 
-  ${bin}sdf2img sample-rec.sdf sample-rec.png --format png
-  ${bin}sdf2img sample-rec.sdf sample-rec16.png --format png16
+${bin}ctrec   sample-pj.pj sample-rec.if 256 256 
+if [ -f sample-rec.if ]; then 
+  ${bin}if2img sample-rec.if sample-rec.png --format png
+  ${bin}if2img sample-rec.if sample-rec16.png --format png16
 fi
 
-# Files sample-phm.png, sample-rs.png, and sample-rec.png are ready for display
+# Files sample-phm.png, sample-pj.png, and sample-rec.png are ready for display