X-Git-Url: http://git.kpe.io/?p=ctsim.git;a=blobdiff_plain;f=src%2Fsample-ctrec.sh.in;h=1a9f105842b59ddcdff715530914263cbfdbf460;hp=b85e71f615ab57d78e8bf001d3aa2f9f22bf876b;hb=2d39e823ba389fc68e5317c422b55be006094252;hpb=c95a927599e20c3d7762073450e3126d9694107d

diff --git a/src/sample-ctrec.sh.in b/src/sample-ctrec.sh.in
index b85e71f..1a9f105 100755
--- a/src/sample-ctrec.sh.in
+++ b/src/sample-ctrec.sh.in
@@ -1,27 +1,39 @@
 #!/bin/sh
 
-bin="@prefix@/bin/"
+if test "$1" != "" ; then
+  bin=$1
+else
+  bin="@prefix@/bin/"
+fi
+
+if test "$1" = "clean" ; then
+  rm -f sample-phm.png sample-phm16.png sample-phm.if sample-pj.pj sample-pj.if sample-pj.png sample-pj16.png sample-rec.if sample-rec.png sample-rec16.png
+  exit
+fi
 
 # Generate phantom image
 
-${bin}phm2sdf sample-phm.sdf 256 256 --nsample 2 --phantom herman
-if [ -f sample-phm.sdf ] ; then
-  ${bin}sdf2img sample-phm.sdf sample-phm.png --format png
+${bin}phm2if sample-phm.if 256 256 --nsample 2 --phantom herman
+if [ -f sample-phm.if ] ; then
+  ${bin}if2img sample-phm.if sample-phm.png --format png
+  ${bin}if2img sample-phm.if sample-phm16.png --format png16
 fi
 
 # Simulate CT data collection and generate raysum sinugram for display
-${bin}phm2rs  sample-rs.rs 367 320 --nray 2  --phantom herman
-if [ -f sample-rs.rs ]; then
-  ${bin}rs2sdf  sample-rs.rs sample-rs.sdf
+${bin}phm2pj  sample-pj.pj 367 320 --nray 2  --phantom herman
+if [ -f sample-pj.pj ]; then
+  ${bin}pj2if  sample-pj.pj sample-pj.if
 fi
-if [ -f sample-rs.sdf ]; then
-  ${bin}sdf2img sample-rs.sdf sample-rs.png --format png
+if [ -f sample-pj.if ]; then
+  ${bin}if2img sample-pj.if sample-pj.png --format png
+  ${bin}if2img sample-pj.if sample-pj16.png --format png16
 fi
 
 # Reconstruct raysums and generate image for display
-${bin}ctrec   sample-rs.rs sample-rec.sdf 256 256 
-if [ -f sample-rec.sdf ]; then 
-  ${bin}sdf2img sample-rec.sdf sample-rec.png --format png
+${bin}ctrec   sample-pj.pj sample-rec.if 256 256 
+if [ -f sample-rec.if ]; then 
+  ${bin}if2img sample-rec.if sample-rec.png --format png
+  ${bin}if2img sample-rec.if sample-rec16.png --format png16
 fi
 
-# Files sample-phm.png, sample-rs.png, and sample-rec.png are ready for display
+# Files sample-phm.png, sample-pj.png, and sample-rec.png are ready for display