From: Kevin M. Rosenberg Date: Wed, 7 Jun 2000 07:55:30 +0000 (+0000) Subject: r86: Initial import X-Git-Tag: debian-4.5.3-3~931 X-Git-Url: http://git.kpe.io/?p=ctsim.git;a=commitdiff_plain;h=c7b8cd29c1e15bd5a95bff829772da2af1989fe5 r86: Initial import --- diff --git a/src/if2img.cpp b/src/if2img.cpp new file mode 100644 index 0000000..1132e73 --- /dev/null +++ b/src/if2img.cpp @@ -0,0 +1,734 @@ +/***************************************************************************** +** This is part of the CTSim program +** Copyright (C) 1983-2000 Kevin Rosenberg +** +** $Id: if2img.cpp,v 1.1 2000/06/07 07:55:30 kevin Exp $ +** $Log: if2img.cpp,v $ +** Revision 1.1 2000/06/07 07:55:30 kevin +** Initial import +** +** Revision 1.1 2000/06/07 02:29:05 kevin +** Initial C++ versions +** +** Revision 1.6 2000/06/03 07:57:51 kevin +** Fixed PNG 16-bit format +** +** Revision 1.5 2000/06/03 06:29:57 kevin +** *** empty log message *** +** +** Revision 1.4 2000/05/24 22:50:04 kevin +** Added support for new SGP library +** +** Revision 1.3 2000/05/16 04:33:59 kevin +** Improved option processing +** +** Revision 1.2 2000/05/08 20:02:32 kevin +** ANSI C changes +** +** Revision 1.1.1.1 2000/04/28 13:02:44 kevin +** Initial CVS import for first public release +** +** +** +** This program is free software; you can redistribute it and/or modify +** it under the terms of the GNU General Public License (version 2) as +** published by the Free Software Foundation. +** +** This program is distributed in the hope that it will be useful, +** but WITHOUT ANY WARRANTY; without even the implied warranty of +** MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +** GNU General Public License for more details. +** +** You should have received a copy of the GNU General Public License +** along with this program; if not, write to the Free Software +** Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +******************************************************************************/ + +/* FILE + * if2img.c Convert an SDF file to a viewable format image + */ + +#include "ct.h" + +#if HAVE_PNG +void sdf2d_to_png (ImageFile& im, char *outfile, int bitdepth, int nxcell, int nycell, double densmin, double densmax); +#endif +#if HAVE_GIF +void sdf2d_to_gif (ImageFile& im, char *outfile, int nxcell, int nycell, double densmin, double densmax); +#endif +void sdf2d_to_pgm (ImageFile& im, char *outfile, int nxcell, int nycell, double densmin, double densmax); +void sdf2d_to_pgmasc (ImageFile& im, char *outfile, int nxcell, int nycell, double densmin, double densmax); + +enum { O_SCALE, O_MIN, O_MAX, O_AUTO, O_CENTER, O_STATS, O_FORMAT, O_LABELS, + O_HELP, O_VERBOSE, O_VERSION, O_DEBUG }; + +static struct option my_options[] = +{ + {"scale", 1, 0, O_SCALE}, + {"min", 1, 0, O_MIN}, + {"max", 1, 0, O_MAX}, + {"auto", 1, 0, O_AUTO}, + {"center", 1, 0, O_CENTER}, + {"format", 1, 0, O_FORMAT}, + {"labels", 0, 0, O_LABELS}, + {"stats", 0, 0, O_STATS}, + {"verbose", 0, 0, O_VERBOSE}, + {"debug", 0, 0, O_DEBUG}, + {"help", 0, 0, O_HELP}, + {"version", 0, 0, O_VERSION}, + {0, 0, 0, 0} +}; + +enum { O_AUTO_FULL, O_AUTO_STD0_1, O_AUTO_STD0_5, O_AUTO_STD1, O_AUTO_STD2, O_AUTO_STD3 }; +#define O_AUTO_FULL_STR "full" +#define O_AUTO_STD0_1_STR "std0.1" +#define O_AUTO_STD0_5_STR "std0.5" +#define O_AUTO_STD1_STR "std1" +#define O_AUTO_STD2_STR "std2" +#define O_AUTO_STD3_STR "std3" + +enum { O_CENTER_MEAN, O_CENTER_MODE }; +#define O_CENTER_MEAN_STR "mean" +#define O_CENTER_MODE_STR "mode" + +enum { O_FORMAT_GIF, O_FORMAT_PNG, O_FORMAT_PNG16, O_FORMAT_PGM, O_FORMAT_PGMASC, O_FORMAT_DISP }; +#define O_FORMAT_GIF_STR "gif" +#define O_FORMAT_PNG_STR "png" +#define O_FORMAT_PNG16_STR "png16" +#define O_FORMAT_PGM_STR "pgm" +#define O_FORMAT_PGMASC_STR "pgmasc" +#define O_FORMAT_DISP_STR "disp" + +void +if2img_usage (const char *program) +{ + fprintf(stdout, "usage: %s sdfname outfile [OPTIONS]\n", kbasename(program)); + fprintf(stdout, "Convert IF file to an image file\n"); + fprintf(stdout, "\n"); + fprintf(stdout, " sdfname Name of input SDF file\n"); + fprintf(stdout, " outfile Name of output file\n"); + fprintf(stdout, " --format Output format\n"); + fprintf(stdout, " pgm PGM (portable graymap) format (default)\n"); + fprintf(stdout, " pgmasc PGM (portable graymap) ASCII format\n"); +#ifdef HAVE_PNG + fprintf(stdout, " png PNG (8-bit) format\n"); + fprintf(stdout, " png16 PNG (16-bit) format\n"); +#endif +#ifdef HAVE_GIF + fprintf(stdout, " gif GIF format\n"); +#endif + fprintf(stdout, " disp Display on screen\n"); + fprintf(stdout, " --center Center of window\n"); + fprintf(stdout, " mode Mode is center of window (default)\n"); + fprintf(stdout, " mean Mean is center of window\n"); + fprintf(stdout, " --auto Set auto window\n"); + fprintf(stdout, " full Use full window (default)\n"); + fprintf(stdout, " std0.1 Use 0.1 standard deviation about center\n"); + fprintf(stdout, " std0.5 Use 0.5 standard deviation about center\n"); + fprintf(stdout, " std1 Use one standard deviation about center\n"); + fprintf(stdout, " std2 Use two standard deviations about center\n"); + fprintf(stdout, " std3 Use three standard deviations about center\n"); + fprintf(stdout, " --scale Scaling factor for output size\n"); + fprintf(stdout, " --min Set minimum intensity\n"); + fprintf(stdout, " --max Set maximum intensity\n"); + fprintf(stdout, " --stats Print image statistics\n"); + fprintf(stdout, " --labels Print image labels\n"); + fprintf(stdout, " --debug Set debug mode\n"); + fprintf(stdout, " --verbose Set verbose mode\n"); + fprintf(stdout, " --version Print version\n"); + fprintf(stdout, " --help Print this help message\n"); +} + + +int +if2img_main (int argc, char *const argv[]) +{ + ImageFile* pim = NULL; + + double densmin = HUGE_VAL, densmax = -HUGE_VAL; + char *in_file, *out_file; + int opt_verbose = 0; + int opt_scale = 1; + int opt_auto = O_AUTO_FULL; + int opt_set_max = 0; + int opt_set_min = 0; + int opt_stats = 0; + int opt_debug = 0; + int opt_center = O_CENTER_MODE; + int opt_format = O_FORMAT_PGM; + int opt_labels = 0; + + while (1) + { + int c = getopt_long (argc, argv, "", my_options, NULL); + char *endptr = NULL; + char *endstr; + + if (c == -1) + break; + + switch (c) + { + case O_MIN: + opt_set_min = 1; + densmin = strtod(optarg, &endptr); + endstr = optarg + strlen(optarg); + if (endptr != endstr) + { + fprintf(stderr, "Error setting --min to %s\n", optarg); + if2img_usage(argv[0]); + return (1); + } + break; + case O_MAX: + opt_set_max = 1; + densmax = strtod(optarg, &endptr); + endstr = optarg + strlen(optarg); + if (endptr != endstr) + { + fprintf(stderr, "Error setting --max to %s\n", optarg); + if2img_usage(argv[0]); + return (1); + } + break; + case O_SCALE: + opt_scale = strtol(optarg, &endptr, 10); + endstr = optarg + strlen(optarg); + if (endptr != endstr) + { + fprintf(stderr,"Error setting --scale to %s\n", optarg); + if2img_usage(argv[0]); + return (1); + } + break; + case O_AUTO: + if (strcmp(optarg, O_AUTO_FULL_STR) == 0) + opt_auto = O_AUTO_FULL; + else if (strcmp(optarg, O_AUTO_STD1_STR) == 0) + opt_auto = O_AUTO_STD1; + else if (strcmp(optarg, O_AUTO_STD0_5_STR) == 0) + opt_auto = O_AUTO_STD0_5; + else if (strcmp(optarg, O_AUTO_STD0_1_STR) == 0) + opt_auto = O_AUTO_STD0_1; + else if (strcmp(optarg, O_AUTO_STD2_STR) == 0) + opt_auto = O_AUTO_STD2; + else if (strcmp(optarg, O_AUTO_STD3_STR) == 0) + opt_auto = O_AUTO_STD3; + else + { + fprintf(stderr, "Invalid auto mode %s\n", optarg); + if2img_usage(argv[0]); + return (1); + } + break; + case O_CENTER: + if (strcmp(optarg, O_CENTER_MEAN_STR) == 0) + opt_center = O_CENTER_MEAN; + else if (strcmp(optarg, O_CENTER_MODE_STR) == 0) + opt_center = O_CENTER_MODE; + else + { + fprintf(stderr, "Invalid center mode %s\n", optarg); + if2img_usage(argv[0]); + return (1); + } + break; + case O_FORMAT: + if (strcmp(optarg, O_FORMAT_PGM_STR) == 0) + opt_format = O_FORMAT_PGM; + else if (strcmp(optarg, O_FORMAT_PGMASC_STR) == 0) + opt_format = O_FORMAT_PGMASC; +#if HAVE_PNG + else if (strcmp(optarg, O_FORMAT_PNG_STR) == 0) + opt_format = O_FORMAT_PNG; + else if (strcmp(optarg, O_FORMAT_PNG16_STR) == 0) + opt_format = O_FORMAT_PNG16; +#endif +#if HAVE_GIF + else if (strcmp(optarg, O_FORMAT_GIF_STR) == 0) + opt_format = O_FORMAT_GIF; +#endif + else if (strcmp(optarg, O_FORMAT_DISP_STR) == 0) + opt_format = O_FORMAT_DISP; + else { + fprintf(stderr, "Invalid format mode %s\n", optarg); + if2img_usage(argv[0]); + return (1); + } + break; + case O_LABELS: + opt_labels = 1; + break; + case O_VERBOSE: + opt_verbose = 1; + break; + case O_DEBUG: + opt_debug = 1; + break; + case O_STATS: + opt_stats = 1; + break; + case O_VERSION: +#ifdef VERSION + fprintf(stdout, "Version %s\n", VERSION); +#else + fprintf(stderr, "Unknown version number"); +#endif + exit(0); + case O_HELP: + case '?': + if2img_usage(argv[0]); + return (0); + default: + if2img_usage(argv[0]); + return (1); + } + } + + if ((opt_format == O_FORMAT_DISP && optind + 1 != argc) + || (opt_format != O_FORMAT_DISP && optind + 2 != argc)) + { + if2img_usage(argv[0]); + return (1); + } + + in_file = argv[optind]; + + if (opt_format != O_FORMAT_DISP) + out_file = argv[optind+1]; + else out_file = NULL; + + pim = new ImageFile (in_file); + ImageFile& im = *pim; + if (! im.adf.fileRead()) { + fprintf(stderr, "File %s does not exist\n", in_file); + return (1); + } + + if (opt_labels) { + int nlabels = im.adf.getNumLabels(); + + for (int i = 0; i < nlabels; i++) { + Array2dFileLabel label; + im.adf.labelRead (label, i); + string str; + label.getDateString (str); + + if (label.getLabelType() == Array2dFileLabel::L_HISTORY) { + cout << "History: " << label.getLabelString() << endl; + cout << " calc time = " << label.getCalcTime() << " secs" << endl; + cout << " Timestamp = " << str << endl; + } else if (label.getLabelType() == Array2dFileLabel::L_USER) { + cout << "Note: " << label.getLabelString() << endl; + cout << " Timestamp = %s" << str << endl; + } + } + } + + if (opt_stats || (! (opt_set_max && opt_set_min))) { + double minfound = HUGE_VAL, maxfound = -HUGE_VAL; + double mode = 0, mean = 0, stddev = 0, window = 0; + double spread; + int hist[256]; + int ibin, nbin = 256; + int max_bin, max_binindex; + double maxbin; + int nx = im.nx(); + int ny = im.ny(); + ImageFileArray v = im.getArray(); + + maxbin = nbin - 1; + for (int ix = 0; ix < nx; ix++) { + for (int iy = 0; iy < ny; iy++) { + if (v[ix][iy] > maxfound) + maxfound = v[ix][iy]; + if (v[ix][iy] < minfound) + minfound = v[ix][iy]; + mean += v[ix][iy]; + } + } + spread = maxfound - minfound; + if (spread == 0) + mode = minfound; + else { + for (ibin = 0; ibin < nbin; ibin++) + hist[ibin] = 0; + for (int ix = 0; ix < nx; ix++) { + for (int iy = 0; iy < ny; iy++) { + int b = (int) ((((v[ix][iy] - minfound) / spread) * (double) maxbin) + 0.5); + hist[b]++; + } + } + max_binindex = 0; + max_bin = -1; + for (ibin = 0; ibin < nbin; ibin++) { + if (hist[ibin] > max_bin) { + max_bin = hist[ibin]; + max_binindex = ibin; + } + } + mode = (((double) max_binindex) * spread / ((double) maxbin)) + minfound; + } + + if (opt_auto == O_AUTO_FULL) { + if (! opt_set_max) + densmax = maxfound; + if (! opt_set_min) + densmin = minfound; + } + if (opt_stats || opt_auto != O_AUTO_FULL) { + mean /= nx * ny; + for (int ix = 0; ix < nx; ix++) { + for (int iy = 0; iy < ny; iy++) { + double diff = (v[ix][iy] - mean); + stddev += diff * diff; + } + } + stddev = sqrt(stddev / (nx * ny)); + if (opt_auto == O_AUTO_FULL) + ; + else if (opt_auto == O_AUTO_STD1) + window = stddev; + else if (opt_auto == O_AUTO_STD0_1) + window = stddev * 0.1; + else if (opt_auto == O_AUTO_STD0_5) + window = stddev * 0.5; + else if (opt_auto == O_AUTO_STD2) + window = stddev * 2; + else if (opt_auto == O_AUTO_STD3) + window = stddev * 3; + else { + fprintf(stderr, "Internal Error: Invalid auto mode %d\n", opt_auto); + return (1); + } + } + if (opt_stats) { + fprintf(stdout,"nx=%d\n", nx); + fprintf(stdout,"ny=%d\n", ny); + fprintf(stdout,"min=%f\n", minfound); + fprintf(stdout,"max=%f\n", maxfound); + fprintf(stdout,"mean=%f\n", mean); + fprintf(stdout,"mode=%f\n", mode); + fprintf(stdout,"stddev=%f\n", stddev); + } + if (opt_auto != O_AUTO_FULL) { + double center; + + if (opt_center == O_CENTER_MODE) + center = mode; + else if (opt_center == O_CENTER_MEAN) + center = mean; + else { + fprintf(stderr, "Internal Error: Invalid center mode %d\n", opt_center); + return (1); + } + if (! opt_set_max) + densmax = center + window; + if (! opt_set_min) + densmin = center - window; + } + } + + if (opt_stats) { + fprintf(stdout,"min_disp=%f\n", densmin); + fprintf(stdout,"max_disp=%f\n", densmax); + } + + if (opt_format == O_FORMAT_PGM) + sdf2d_to_pgm (im, out_file, opt_scale, opt_scale, densmin, densmax); + else if (opt_format == O_FORMAT_PGMASC) + sdf2d_to_pgmasc (im, out_file, opt_scale, opt_scale, densmin, densmax); +#if HAVE_PNG + else if (opt_format == O_FORMAT_PNG) + sdf2d_to_png (im, out_file, 8, opt_scale, opt_scale, densmin, densmax); + else if (opt_format == O_FORMAT_PNG16) + sdf2d_to_png (im, out_file, 16, opt_scale, opt_scale, densmin, densmax); +#endif +#if HAVE_GIF + else if (opt_format == O_FORMAT_GIF) + sdf2d_to_gif (im, out_file, opt_scale, opt_scale, densmin, densmax); +#endif + else if (opt_format == O_FORMAT_DISP) { +#if HAVE_SGP + // image_display_scale (im, opt_scale, densmin, densmax); + // cio_kb_getc(); + sgp2_close(sgp2_get_active_win()); +#endif + } + else + { + fprintf(stderr, "Internal Error: Invalid format mode %d\n", opt_format); + return (1); + } + return (0); +} + + +void +sdf2d_to_pgm (ImageFile& im, char *outfile, int nxcell, int nycell, double densmin, double densmax) +{ + FILE *fp; + int irow; + unsigned char *rowp; + int nx = im.nx(); + int ny = im.ny(); + ImageFileArray v = im.getArray(); + + rowp = (unsigned char *) sys_alloc(nx * nxcell,"sdf2d_to_img"); + if (rowp == NULL) + return; + + if ((fp = fopen (outfile, "wb")) == NULL) + return; + + fprintf(fp, "P5\n"); + fprintf(fp, "%d %d\n", nx, ny); + fprintf(fp, "255\n"); + + for (irow = ny - 1; irow >= 0; irow--) + { + int icol, ir; + + for (icol = 0; icol < nx; icol++) + { + double dens; + int p; + int pos = icol * nxcell; + dens = (v[icol][irow] - densmin) / (densmax - densmin); + if (dens < 0) + dens = 0; + else if (dens > 1) + dens = 1; + for (p = pos; p < pos + nxcell; p++) + { + rowp[p] = (unsigned int) (dens * 255.); + } + } + for (ir = 0; ir < nycell; ir++) + { + int ic; + for (ic = 0; ic < nx * nxcell; ic++) + fprintf(fp, "%c ", rowp[ic]); + } + } + sys_free(rowp, "if2img"); + + fclose(fp); +} + +void +sdf2d_to_pgmasc (ImageFile& im, char *outfile, int nxcell, int nycell, double densmin, double densmax) +{ + FILE *fp; + int irow; + unsigned char *rowp; + int nx = im.nx(); + int ny = im.ny(); + ImageFileArray v = im.getArray(); + + rowp = (unsigned char *) sys_alloc(nx * nxcell,"sdf2d_to_img"); + if (rowp == NULL) + return; + + if ((fp = fopen (outfile, "wb")) == NULL) + return; + + fprintf(fp, "P2\n"); + fprintf(fp, "%d %d\n", nx, ny); + fprintf(fp, "255\n"); + + for (irow = ny - 1; irow >= 0; irow--) + { + int icol, ir; + + for (icol = 0; icol < nx; icol++) + { + double dens; + int p; + int pos = icol * nxcell; + dens = (v[icol][irow] - densmin) / (densmax - densmin); + if (dens < 0) + dens = 0; + else if (dens > 1) + dens = 1; + for (p = pos; p < pos + nxcell; p++) + { + rowp[p] = (unsigned int) (dens * 255.); + } + } + for (ir = 0; ir < nycell; ir++) + { + int ic; + for (ic = 0; ic < nx * nxcell; ic++) + fprintf(fp, "%d ", rowp[ic]); + fprintf(fp, "\n"); + } + } + sys_free(rowp, "if2img"); + + fclose(fp); +} + + +#ifdef HAVE_PNG +void +sdf2d_to_png (ImageFile& im, char *outfile, int bitdepth, int nxcell, int nycell, double densmin, double densmax) +{ + FILE *fp; + png_structp png_ptr; + png_infop info_ptr; + int irow; + unsigned char *rowp; + double max_out_level = (1 << bitdepth) - 1; + int nx = im.nx(); + int ny = im.ny(); + ImageFileArray v = im.getArray(); + + rowp = (unsigned char *) sys_alloc(nx * nxcell * (bitdepth / 8),"sdf2d_to_img"); + if (rowp == NULL) + return; + + if ((fp = fopen (outfile, "wb")) == NULL) + return; + + png_ptr = png_create_write_struct (PNG_LIBPNG_VER_STRING, NULL, NULL, NULL); + if (! png_ptr) + return; + + info_ptr = png_create_info_struct(png_ptr); + if (! info_ptr) + { + png_destroy_write_struct(&png_ptr, (png_infopp) NULL); + fclose(fp); + return; + } + + if (setjmp(png_ptr->jmpbuf)) + { + png_destroy_write_struct(&png_ptr, &info_ptr); + fclose(fp); + return; + } + + png_init_io(png_ptr, fp); + + png_set_IHDR(png_ptr, info_ptr, nx * nxcell, ny * nycell, bitdepth, PNG_COLOR_TYPE_GRAY, PNG_INTERLACE_NONE, PNG_COMPRESSION_TYPE_BASE, PNG_FILTER_TYPE_DEFAULT); + + png_write_info(png_ptr, info_ptr); + for (irow = ny - 1; irow >= 0; irow--) + { + png_bytep row_pointer = rowp; + int icol, ir; + + for (icol = 0; icol < nx; icol++) + { + double dens; + int p; + unsigned int outval; + int pos = icol * nxcell; + dens = (v[icol][irow] - densmin) / (densmax - densmin); + if (dens < 0) + dens = 0; + else if (dens > 1) + dens = 1; + outval = (unsigned int) (dens * max_out_level); + for (p = pos; p < pos + nxcell; p++) + { + if (bitdepth == 8) + rowp[p] = outval; + else { + int rowpos = p * 2; + rowp[rowpos] = (outval >> 8) & 0xFF; + rowp[rowpos+1] = (outval & 0xFF); + } + } + } + for (ir = 0; ir < nycell; ir++) + { + png_write_rows (png_ptr, &row_pointer, 1); + } + } + sys_free(rowp, "if2img"); + + png_write_end(png_ptr, info_ptr); + png_destroy_write_struct(&png_ptr, &info_ptr); + + fclose(fp); +} +#endif + +#ifdef HAVE_GD +#include "gd.h" +#define N_GRAYSCALE 256 +#endif + +void +sdf2d_to_gif (ImageFile& im, char *outfile, int nxcell, int nycell, double densmin, double densmax) +{ +#ifdef HAVE_GD + gdImagePtr gif; + FILE *out; + int gs_indices[N_GRAYSCALE]; + int i; + int irow; + int lastrow; + unsigned char *rowp; + int nx = im.nx(); + int ny = im.ny(); + ImageFileArray v = im.getArray(); + + rowp = (unsigned char *) sys_alloc(nx * nxcell,"sdf2d_to_img"); + if (rowp == NULL) + return; + + gif = gdImageCreate(nx * nxcell, ny * nycell); + for (i = 0; i < N_GRAYSCALE; i++) + gs_indices[i] = gdImageColorAllocate(gif, i, i, i); + + lastrow = ny * nycell - 1; + for (irow = 0; irow < ny; irow++) + { + int icol, ir; + int rpos = irow * nycell; + for (ir = rpos; ir < rpos + nycell; ir++) + { + for (icol = 0; icol < nx; icol++) + { + double dens; + int ic; + int cpos = icol * nxcell; + dens = (v[icol][irow] - densmin) / (densmax - densmin); + if (dens < 0) + dens = 0; + else if (dens > 1) + dens = 1; + for (ic = cpos; ic < cpos + nxcell; ic++) + { + rowp[ic] = (unsigned int) (dens * (double) (N_GRAYSCALE - 1)); + gdImageSetPixel(gif, ic, lastrow - ir, gs_indices[rowp[ic]]); + } + } + } + } + sys_free(rowp, "if2img"); + + if ((out = fopen(outfile,"w")) == NULL) + { + fprintf(stderr,"Error opening output file %s for writing\n", outfile); + exit(1); + } + gdImageGif(gif,out); + fclose(out); + gdImageDestroy(gif); +#else + fprintf(stderr, "This version does not support GIF"); +#endif +} + +#ifndef NO_MAIN +int +main (int argc, char *const argv[]) +{ + return (if2img_main(argc, argv)); +} +#endif