X-Git-Url: http://git.kpe.io/?p=umlisp.git;a=blobdiff_plain;f=data-structures.lisp;h=5f86198b396c32da53aa0cdcdcfda5f56d00c112;hp=b5c35762d5240cebf24fc30facc50d30a3882184;hb=7aadf2bbca30301d2479a21edbcdcb6e12da5cd0;hpb=a208918eab061ade24ae18046e635a27cb04bc2d diff --git a/data-structures.lisp b/data-structures.lisp index b5c3576..5f86198 100644 --- a/data-structures.lisp +++ b/data-structures.lisp @@ -2,15 +2,15 @@ ;;;; ************************************************************************* ;;;; FILE IDENTIFICATION ;;;; -;;;; Name: data-structures.lisp -;;;; Purpose: Basic data objects for UMLisp -;;;; Author: Kevin M. Rosenberg -;;;; Date Started: Apr 2000 +;;;; Name: data-structures.lisp +;;;; Purpose: Basic data objects for UMLisp +;;;; Author: Kevin M. Rosenberg +;;;; Created: Apr 2000 ;;;; ;;;; $Id$ ;;;; ;;;; This file, part of UMLisp, is -;;;; Copyright (c) 2000-2004 by Kevin M. Rosenberg, M.D. +;;;; Copyright (c) 2000-2006 by Kevin M. Rosenberg, M.D. ;;;; ;;;; UMLisp users are granted the rights to distribute and use this software ;;;; as governed by the terms of the GNU General Public License. @@ -20,41 +20,58 @@ ;;; Paths for files -(defvar *umls-path* - (make-pathname :directory '(:absolute "data" "umls" "2003AC")) +(defparameter *release* "2006AC") + +(defparameter *umls-path* + (make-pathname :directory (list :absolute "srv" "umls" *release*)) "Path for base of UMLS data files") -(defvar *meta-path* - (merge-pathnames - (make-pathname :directory '(:relative "META")) - *umls-path*)) +(defparameter *meta-dir* + (make-pathname :directory '(:relative "META"))) + +(defparameter *lex-dir* + (make-pathname :directory '(:relative "LEX"))) + +(defparameter *net-dir* + (make-pathname :directory '(:relative "NET"))) -(defvar *lex-path* - (merge-pathnames - (make-pathname :directory '(:relative "LEX")) - *umls-path*)) +(defparameter *meta-path* + (merge-pathnames *meta-dir* *umls-path*)) -(defvar *net-path* - (merge-pathnames - (make-pathname :directory '(:relative "NET")) - *umls-path*)) +(defparameter *lex-path* + (merge-pathnames *lex-dir* *umls-path*)) + +(defparameter *net-path* + (merge-pathnames *net-dir* *umls-path*)) (defun umls-path! (p) - (setq *umls-path* p)) + (setq *umls-path* p) + (setq *meta-path* (merge-pathnames *meta-dir* *umls-path*)) + (setq *lex-path* (merge-pathnames *lex-dir* *umls-path*)) + (setq *net-path* (merge-pathnames *net-dir* *umls-path*))) ;;; Structures for parsing UMLS text files - -(defparameter *umls-files* nil + +(defparameter *umls-files* nil "List of umls file structures. Used when parsing text files.") -(defparameter *umls-cols* nil +(defparameter *umls-cols* nil "List of meta column structures. Used when parsing text files.") +;; Special variables + +(defvar *has-fixnum-class* (when (ignore-errors (find-class 'fixnum)) t)) + +(defvar *octet-sql-storage* t + "Used to deciding field lengths. Use nil if using UTF-8 database encoding. But, UTF-8 will cause MySQL to double the bytes used for fixed field sizes.") + ;; Preliminary objects to replace structures (defclass ufile () - ((fil :initarg :fil :accessor fil) + ((subdir :initarg :subdir :accessor subdir) + (dir :initarg :dir :accessor dir) + (fil :initarg :fil :accessor fil) (table :initarg :table :accessor table) (des :initarg :des :accessor des) (fmt :initarg :fmt :accessor fmt) @@ -64,7 +81,7 @@ (fields :initarg :fields :accessor fields) (ucols :initarg :ucols :accessor ucols)) (:default-initargs :fil nil :table nil :des nil :fmt nil :cls nil :rws nil :bts nil - :fields nil :ucols nil) + :fields nil :ucols nil :subdir nil :dir nil) (:documentation "UMLS File")) (defclass ucol () @@ -96,4 +113,3 @@ (format s "~A" (col obj)))) -