From 10aef4d2174b37725e5e517a55e5f7ee534fb142 Mon Sep 17 00:00:00 2001 From: "Kevin M. Rosenberg" Date: Thu, 29 Mar 2007 15:53:21 +0000 Subject: [PATCH] r11599: add support for find-uconso-multiword --- classes.lisp | 2 ++ package.lisp | 1 + sql-classes.lisp | 52 ++++++++++++++++++++++++++++++++++++------------ 3 files changed, 42 insertions(+), 13 deletions(-) diff --git a/classes.lisp b/classes.lisp index d054bdd..76ba8d7 100644 --- a/classes.lisp +++ b/classes.lisp @@ -237,6 +237,8 @@ (defclass uconso (umlsclass) ((cui :value-type fixnum :initarg :cui :reader cui :print-formatter fmt-cui :hyperlink find-ucon-cui) + (pfstr :value-type cdata :initarg :pfstr :reader pfstr + :compute-cached-value (find-pfstr-cui cui)) (lat :value-type string :initarg :lat :reader lat) (ts :value-type string :initarg :ts :reader ts) (lui :value-type fixnum :initarg :lui :reader lui :print-formatter fmt-lui) diff --git a/package.lisp b/package.lisp index 3ea7490..45bb26c 100644 --- a/package.lisp +++ b/package.lisp @@ -134,6 +134,7 @@ #:find-uterm-word #:find-uterm-normalized-word #:find-ucon-multiword + #:find-uconso-multiword #:find-ucon-normalized-multiword #:find-ustr-multiword #:find-ustr-normalized-multiword diff --git a/sql-classes.lisp b/sql-classes.lisp index 8d8be13..ec68c5e 100644 --- a/sql-classes.lisp +++ b/sql-classes.lisp @@ -728,20 +728,35 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" :lrl 'klrl :order '(cui asc)) (find-ucon-cui cui :srl srl))) +(defun find-uconso-word (word &key (srl *current-srl*) (like nil)) + "Return list of uconso objects that match word. Optionally, use SQL's LIKE syntax" + (collect-umlisp-query-eval ('mrxw_eng '(cui) srl 'wd word :like like :distinct t + :lrl 'klrl :order '(cui asc)) + (find-uconso-cui cui :srl srl))) + +(defun mrconso-query-word-cui (word sab srl like) + (format nil "SELECT c.cui FROM MRCONSO c,MRXW_ENG x WHERE x.WD ~A '~A' AND x.cui=c.cui AND ~A ~A" + (if like "LIKE" "=") + (clsql-sys::sql-escape-quotes word) + (etypecase sab + (string + (format nil " c.sab='~A'" (clsql-sys::sql-escape-quotes sab))) + (cons + (format nil " c.sab IN (~{'~A'~^,~})" + (mapcar 'clsql-sys::sql-escape-quotes sab))) + (null + (error "SAB missing"))) + (if srl (format nil "AND KCUILRL <= ~A" srl) ""))) + +(defun find-uconso-word-sab (word &key sab (srl *current-srl*) (like nil)) + "Return list of uconso that match word in matching SAB. Optionally, use SQL's LIKE syntax" + (let ((query (mrconso-query-word-cui word sab srl like))) + (loop for cui in (remove-duplicates (sort (mapcar 'car (mutex-sql-query query)) #'<)) + collect (find-uconso-cui cui)))) + (defun find-ucon-word-sab (word &key sab (srl *current-srl*) (like nil)) - "Return list of ustr that match word in matching SAB. Optionally, use SQL's LIKE syntax" - (let ((query (format nil "SELECT c.cui FROM MRCONSO c,MRXW_ENG x WHERE x.WD ~A '~A' AND x.cui=c.cui AND ~A ~A" - (if like "LIKE" "=") - (clsql-sys::sql-escape-quotes word) - (etypecase sab - (string - (format nil " c.sab='~A'" (clsql-sys::sql-escape-quotes sab))) - (cons - (format nil " c.sab IN (~{'~A'~^,~})" - (mapcar 'clsql-sys::sql-escape-quotes sab))) - (null - (error "SAB missing"))) - (if srl (format nil "AND KCUILRL <= ~A" srl) "")))) + "Return list of ucon that match word in matching SAB. Optionally, use SQL's LIKE syntax" + (let ((query (mrconso-query-word-cui word sab srl like))) (loop for tuple in (mutex-sql-query query) collect (make-instance 'ucon :cui (first tuple))))) @@ -865,6 +880,17 @@ is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS" (find-uobj-multiword str #'find-ucon-word #'sort-score-pfstr-str #'cui srl only-exact-if-match limit))) +(defun find-uconso-multiword (str &key (srl *current-srl*) + (only-exact-if-match t) + limit + sab) + (if sab + (find-uobj-multiword str #'find-uconso-word-sab #'sort-score-pfstr-str + #'cui srl only-exact-if-match limit + :extra-lookup-args (list :sab sab)) + (find-uobj-multiword str #'find-uconso-word #'sort-score-pfstr-str + #'cui srl only-exact-if-match limit))) + (defun find-uterm-multiword (str &key (srl *current-srl*) (only-exact-if-match t) limit) -- 2.34.1