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r343: no message
author
Kevin M. Rosenberg
<kevin@rosenberg.net>
Tue, 2 Jan 2001 13:57:52 +0000
(13:57 +0000)
committer
Kevin M. Rosenberg
<kevin@rosenberg.net>
Tue, 2 Jan 2001 13:57:52 +0000
(13:57 +0000)
tools/phm2if.cpp
patch
|
blob
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history
diff --git
a/tools/phm2if.cpp
b/tools/phm2if.cpp
index 80dc0d121e32e12aac046e4c6cc6ca19f956bcf8..f7f9551d62505bc5f7447df0b8f69cc5492a5d7d 100644
(file)
--- a/
tools/phm2if.cpp
+++ b/
tools/phm2if.cpp
@@
-9,7
+9,7
@@
** This is part of the CTSim program
** Copyright (C) 1983-2000 Kevin Rosenberg
**
** This is part of the CTSim program
** Copyright (C) 1983-2000 Kevin Rosenberg
**
-** $Id: phm2if.cpp,v 1.1
8 2001/01/02 07:24:26
kevin Exp $
+** $Id: phm2if.cpp,v 1.1
9 2001/01/02 13:57:52
kevin Exp $
**
** This program is free software; you can redistribute it and/or modify
** it under the terms of the GNU General Public License (version 2) as
**
** This program is free software; you can redistribute it and/or modify
** it under the terms of the GNU General Public License (version 2) as
@@
-30,7
+30,7
@@
enum { O_PHANTOM, O_DESC, O_NSAMPLE, O_FILTER, O_TRACE, O_VERBOSE, O_HELP,
enum { O_PHANTOM, O_DESC, O_NSAMPLE, O_FILTER, O_TRACE, O_VERBOSE, O_HELP,
-
O_PHMFILE, O_FILTER_DOMAIN, O_FILTER_BW, O_FILTER_PARAM, O_DEBUG, O_VERSION };
+O_PHMFILE, O_FILTER_DOMAIN, O_FILTER_BW, O_FILTER_PARAM, O_DEBUG, O_VERSION };
static struct option my_options[] =
{
static struct option my_options[] =
{
@@
-50,7
+50,7
@@
static struct option my_options[] =
{0, 0, 0, 0}
};
{0, 0, 0, 0}
};
-static const char* g_szIdStr = "$Id: phm2if.cpp,v 1.1
8 2001/01/02 07:24:26
kevin Exp $";
+static const char* g_szIdStr = "$Id: phm2if.cpp,v 1.1
9 2001/01/02 13:57:52
kevin Exp $";
void
phm2if_usage (const char *program)
void
phm2if_usage (const char *program)
@@
-125,7
+125,7
@@
phm2if_main (int argc, char* argv[])
char *endptr = NULL;
char *endstr;
Timer timerProgram;
char *endptr = NULL;
char *endstr;
Timer timerProgram;
-
+
#ifdef HAVE_MPI
ImageFile* pImLocal = NULL;
MPIWorld mpiWorld (argc, argv);
#ifdef HAVE_MPI
ImageFile* pImLocal = NULL;
MPIWorld mpiWorld (argc, argv);
@@
-134,76
+134,76
@@
phm2if_main (int argc, char* argv[])
while (1) {
int c = getopt_long(argc, argv, "", my_options, NULL);
if (c == -1)
while (1) {
int c = getopt_long(argc, argv, "", my_options, NULL);
if (c == -1)
- break;
+
break;
switch (c) {
case O_PHANTOM:
switch (c) {
case O_PHANTOM:
- optPhmName = optarg;
- break;
+
optPhmName = optarg;
+
break;
case O_PHMFILE:
case O_PHMFILE:
- optPhmFilename = optarg;
- break;
+
optPhmFilename = optarg;
+
break;
case O_VERBOSE:
case O_VERBOSE:
- optVerbose = true;
- break;
+
optVerbose = true;
+
break;
case O_DEBUG:
case O_DEBUG:
- optDebug = true;
- break;
+
optDebug = true;
+
break;
case O_TRACE:
case O_TRACE:
- if ((optTrace = Trace::convertTraceNameToID(optarg)) == Trace::TRACE_INVALID) {
- phm2if_usage(argv[0]);
- return (1);
- }
- break;
+
if ((optTrace = Trace::convertTraceNameToID(optarg)) == Trace::TRACE_INVALID) {
+
phm2if_usage(argv[0]);
+
return (1);
+
}
+
break;
case O_FILTER:
case O_FILTER:
- optFilterName = optarg;
- break;
+
optFilterName = optarg;
+
break;
case O_FILTER_DOMAIN:
case O_FILTER_DOMAIN:
- optDomainName = optarg;
- break;
+
optDomainName = optarg;
+
break;
case O_DESC:
case O_DESC:
- optDesc = optarg;
- break;
+
optDesc = optarg;
+
break;
case O_FILTER_BW:
case O_FILTER_BW:
- optFilterBW = strtod(optarg, &endptr);
- endstr = optarg + strlen(optarg);
- if (endptr != endstr) {
- sys_error(ERR_SEVERE,"Error setting --filter-bw to %s\n", optarg);
- phm2if_usage(argv[0]);
- return (1);
- }
- break;
+
optFilterBW = strtod(optarg, &endptr);
+
endstr = optarg + strlen(optarg);
+
if (endptr != endstr) {
+
sys_error(ERR_SEVERE,"Error setting --filter-bw to %s\n", optarg);
+
phm2if_usage(argv[0]);
+
return (1);
+
}
+
break;
case O_FILTER_PARAM:
case O_FILTER_PARAM:
- optFilterParam = strtod(optarg, &endptr);
- endstr = optarg + strlen(optarg);
- if (endptr != endstr) {
- sys_error(ERR_SEVERE,"Error setting --filter-param to %s\n", optarg);
- phm2if_usage(argv[0]);
- return (1);
- }
- break;
+
optFilterParam = strtod(optarg, &endptr);
+
endstr = optarg + strlen(optarg);
+
if (endptr != endstr) {
+
sys_error(ERR_SEVERE,"Error setting --filter-param to %s\n", optarg);
+
phm2if_usage(argv[0]);
+
return (1);
+
}
+
break;
case O_NSAMPLE:
case O_NSAMPLE:
- opt_nsample = strtol(optarg, &endptr, 10);
- endstr = optarg + strlen(optarg);
- if (endptr != endstr) {
- sys_error(ERR_SEVERE,"Error setting --nsample to %s\n", optarg);
- phm2if_usage(argv[0]);
- return (1);
- }
- break;
-
case O_VERSION:
+
opt_nsample = strtol(optarg, &endptr, 10);
+
endstr = optarg + strlen(optarg);
+
if (endptr != endstr) {
+
sys_error(ERR_SEVERE,"Error setting --nsample to %s\n", optarg);
+
phm2if_usage(argv[0]);
+
return (1);
+
}
+
break;
+ case O_VERSION:
#ifdef VERSION
#ifdef VERSION
-
std::cout << "Version " << VERSION << std::endl << g_szIdStr << std::endl;
+ std::cout << "Version " << VERSION << std::endl << g_szIdStr << std::endl;
#else
#else
-
std::cerr << "Unknown version number\n";
+ std::cerr << "Unknown version number\n";
#endif
case O_HELP:
case '?':
#endif
case O_HELP:
case '?':
- phm2if_usage(argv[0]);
- return (0);
+
phm2if_usage(argv[0]);
+
return (0);
default:
default:
- phm2if_usage(argv[0]);
- return (1);
+
phm2if_usage(argv[0]);
+
return (1);
}
}
}
}
@@
-212,7
+212,7
@@
phm2if_main (int argc, char* argv[])
phm2if_usage(argv[0]);
return (1);
}
phm2if_usage(argv[0]);
return (1);
}
-
+
if (optind + 3 != argc) {
phm2if_usage(argv[0]);
return (1);
if (optind + 3 != argc) {
phm2if_usage(argv[0]);
return (1);
@@
-249,27
+249,27
@@
phm2if_main (int argc, char* argv[])
if (optPhmName != "") {
phm.createFromPhantom (optPhmName.c_str());
if (phm.fail()) {
if (optPhmName != "") {
phm.createFromPhantom (optPhmName.c_str());
if (phm.fail()) {
- std::cout << phm.failMessage() << std::endl << std::endl;
- phm2if_usage(argv[0]);
- return (1);
+
std::cout << phm.failMessage() << std::endl << std::endl;
+
phm2if_usage(argv[0]);
+
return (1);
}
}
}
}
-
+
if (optPhmFilename != "") {
phm.createFromFile(optPhmFilename.c_str());
#ifdef HAVE_MPI
if (mpiWorld.getRank() == 0)
if (optPhmFilename != "") {
phm.createFromFile(optPhmFilename.c_str());
#ifdef HAVE_MPI
if (mpiWorld.getRank() == 0)
- std::cerr << "Can't use phantom from file in MPI mode\n";
+
std::cerr << "Can't use phantom from file in MPI mode\n";
return (1);
#endif
}
return (1);
#endif
}
-
+
if (optVerbose)
std::cout << "Rasterize Phantom to Image\n" << std::endl;
#ifdef HAVE_MPI
}
#endif
if (optVerbose)
std::cout << "Rasterize Phantom to Image\n" << std::endl;
#ifdef HAVE_MPI
}
#endif
-
+
#ifdef HAVE_MPI
TimerCollectiveMPI timerBcast (mpiWorld.getComm());
mpiWorld.BcastString (optPhmName);
#ifdef HAVE_MPI
TimerCollectiveMPI timerBcast (mpiWorld.getComm());
mpiWorld.BcastString (optPhmName);
@@
-281,18
+281,18
@@
phm2if_main (int argc, char* argv[])
mpiWorld.getComm().Bcast (&opt_nsample, 1, MPI::INT, 0);
mpiWorld.getComm().Bcast (&optFilterParam, 1, MPI::DOUBLE, 0);
mpiWorld.getComm().Bcast (&optFilterBW, 1, MPI::DOUBLE, 0);
mpiWorld.getComm().Bcast (&opt_nsample, 1, MPI::INT, 0);
mpiWorld.getComm().Bcast (&optFilterParam, 1, MPI::DOUBLE, 0);
mpiWorld.getComm().Bcast (&optFilterBW, 1, MPI::DOUBLE, 0);
-
+
mpiWorld.BcastString (optFilterName);
mpiWorld.BcastString (optDomainName);
mpiWorld.BcastString (optFilterName);
mpiWorld.BcastString (optDomainName);
-
+
if (optVerbose)
timerBcast.timerEndAndReport ("Time to broadcast variables");
if (optVerbose)
timerBcast.timerEndAndReport ("Time to broadcast variables");
-
+
mpiWorld.setTotalWorkUnits (opt_nx);
mpiWorld.setTotalWorkUnits (opt_nx);
-
+
if (mpiWorld.getRank() > 0 && optPhmName != "")
if (mpiWorld.getRank() > 0 && optPhmName != "")
-
phm.createFromPhantom (optPhmName.c_str());
-
+ phm.createFromPhantom (optPhmName.c_str());
+
if (mpiWorld.getRank() == 0) {
pImGlobal = new ImageFile (opt_nx, opt_ny);
}
if (mpiWorld.getRank() == 0) {
pImGlobal = new ImageFile (opt_nx, opt_ny);
}
@@
-300,12
+300,12
@@
phm2if_main (int argc, char* argv[])
#else
pImGlobal = new ImageFile (opt_nx, opt_ny);
#endif
#else
pImGlobal = new ImageFile (opt_nx, opt_ny);
#endif
-
+
ImageFileArray v = NULL;
#ifdef HAVE_MPI
if (mpiWorld.getRank() == 0)
v = pImGlobal->getArray ();
ImageFileArray v = NULL;
#ifdef HAVE_MPI
if (mpiWorld.getRank() == 0)
v = pImGlobal->getArray ();
-
+
if (phm.getComposition() == P_UNIT_PULSE) {
if (mpiWorld.getRank() == 0) {
v[opt_nx/2][opt_ny/2] = 1.;
if (phm.getComposition() == P_UNIT_PULSE) {
if (mpiWorld.getRank() == 0) {
v[opt_nx/2][opt_ny/2] = 1.;
@@
-319,7
+319,7
@@
phm2if_main (int argc, char* argv[])
phm.convertToImagefile (*pImLocal, opt_nsample, optTrace, mpiWorld.getMyStartWorkUnit(), mpiWorld.getMyLocalWorkUnits(), false);
if (optVerbose)
timerRasterize.timerEndAndReport ("Time to rasterize phantom");
phm.convertToImagefile (*pImLocal, opt_nsample, optTrace, mpiWorld.getMyStartWorkUnit(), mpiWorld.getMyLocalWorkUnits(), false);
if (optVerbose)
timerRasterize.timerEndAndReport ("Time to rasterize phantom");
-
+
TimerCollectiveMPI timerGather (mpiWorld.getComm());
mpi_gather_image (mpiWorld, pImGlobal, pImLocal, optDebug);
if (optVerbose)
TimerCollectiveMPI timerGather (mpiWorld.getComm());
mpi_gather_image (mpiWorld, pImGlobal, pImLocal, optDebug);
if (optVerbose)
@@
-333,13
+333,13
@@
phm2if_main (int argc, char* argv[])
pImGlobal->filterResponse (optDomainName.c_str(), optFilterBW, optFilterName.c_str(), optFilterParam);
} else {
#if HAVE_SGP
pImGlobal->filterResponse (optDomainName.c_str(), optFilterBW, optFilterName.c_str(), optFilterParam);
} else {
#if HAVE_SGP
-
if (optTrace >= Trace::TRACE_PHANTOM)
-
phm.show();
+ if (optTrace >= Trace::TRACE_PHANTOM)
+ phm.show();
#endif
#endif
-
phm.convertToImagefile (*pImGlobal, opt_nsample, optTrace);
+ phm.convertToImagefile (*pImGlobal, opt_nsample, optTrace);
}
#endif
}
#endif
-
+
#ifdef HAVE_MPI
if (mpiWorld.getRank() == 0)
#endif
#ifdef HAVE_MPI
if (mpiWorld.getRank() == 0)
#endif
@@
-348,8
+348,8
@@
phm2if_main (int argc, char* argv[])
pImGlobal->labelAdd (Array2dFileLabel::L_HISTORY, optDesc.c_str(), calctime);
pImGlobal->fileWrite (optOutFilename.c_str());
if (optVerbose)
pImGlobal->labelAdd (Array2dFileLabel::L_HISTORY, optDesc.c_str(), calctime);
pImGlobal->fileWrite (optOutFilename.c_str());
if (optVerbose)
- std::cout << "Time to rasterize
d
phantom: " << calctime << " seconds\n";
-
+ std::cout << "Time to rasterize phantom: " << calctime << " seconds\n";
+
if (optTrace >= Trace::TRACE_PHANTOM) {
double dmin, dmax;
int nscale;
if (optTrace >= Trace::TRACE_PHANTOM) {
double dmin, dmax;
int nscale;
@@
-357,17
+357,18
@@
phm2if_main (int argc, char* argv[])
std::cout << "Enter display size scale (nominal = 1): ";
std::cin >> nscale;
std::cout << "Enter minimum and maximum densities (min, max): ";
std::cout << "Enter display size scale (nominal = 1): ";
std::cin >> nscale;
std::cout << "Enter minimum and maximum densities (min, max): ";
- std::cin >> dmin;
\r
+ std::cin >> dmin;
+
std::cin >> dmax;
pImGlobal->displayScaling (nscale, dmin, dmax);
}
}
std::cin >> dmax;
pImGlobal->displayScaling (nscale, dmin, dmax);
}
}
-
+
delete pImGlobal;
#ifdef HAVE_MPI
delete pImLocal;
#endif
delete pImGlobal;
#ifdef HAVE_MPI
delete pImLocal;
#endif
-
+
return (0);
}
return (0);
}
@@
-379,22
+380,22
@@
void mpi_gather_image (MPIWorld& mpiWorld, ImageFile* pImGlobal, ImageFile* pImL
ImageFileArray vLocal = pImLocal->getArray();
ImageFileArray vGlobal = NULL;
int nyLocal = pImLocal->ny();
ImageFileArray vLocal = pImLocal->getArray();
ImageFileArray vGlobal = NULL;
int nyLocal = pImLocal->ny();
-
+
if (mpiWorld.getRank() == 0)
vGlobal = pImGlobal->getArray();
for (int iw = 0; iw < mpiWorld.getMyLocalWorkUnits(); iw++)
mpiWorld.getComm().Send(vLocal[iw], nyLocal, pImLocal->getMPIDataType(), 0, 0);
if (mpiWorld.getRank() == 0)
vGlobal = pImGlobal->getArray();
for (int iw = 0; iw < mpiWorld.getMyLocalWorkUnits(); iw++)
mpiWorld.getComm().Send(vLocal[iw], nyLocal, pImLocal->getMPIDataType(), 0, 0);
-
+
if (mpiWorld.getRank() == 0) {
for (int iProc = 0; iProc < mpiWorld.getNumProcessors(); iProc++) {
for (int iw = mpiWorld.getStartWorkUnit(iProc); iw <= mpiWorld.getEndWorkUnit(iProc); iw++) {
if (mpiWorld.getRank() == 0) {
for (int iProc = 0; iProc < mpiWorld.getNumProcessors(); iProc++) {
for (int iw = mpiWorld.getStartWorkUnit(iProc); iw <= mpiWorld.getEndWorkUnit(iProc); iw++) {
- MPI::Status status;
- mpiWorld.getComm().Recv(vGlobal[iw], nyLocal, pImLocal->getMPIDataType(), iProc, 0, status);
+
MPI::Status status;
+
mpiWorld.getComm().Recv(vGlobal[iw], nyLocal, pImLocal->getMPIDataType(), iProc, 0, status);
}
}
}
}
}
}
-
+
}
#endif
}
#endif
@@
-403,7
+404,7
@@
int
main (int argc, char* argv[])
{
int retval = 1;
main (int argc, char* argv[])
{
int retval = 1;
-
+
try {
retval = phm2if_main(argc, argv);
} catch (exception e) {
try {
retval = phm2if_main(argc, argv);
} catch (exception e) {
@@
-411,7
+412,7
@@
main (int argc, char* argv[])
} catch (...) {
std::cerr << "Unknown exception\n";
}
} catch (...) {
std::cerr << "Unknown exception\n";
}
-
+
return (retval);
}
#endif
return (retval);
}
#endif