;;;;
;;;; Name: sql-classes.lisp
;;;; Purpose: Routines for reading UMLS objects from SQL database
-;;;; Programmer: Kevin M. Rosenberg
+;;;; Author: Kevin M. Rosenberg
;;;; Date Started: Apr 2000
;;;;
-;;;; $Id: sql-classes.lisp,v 1.17 2003/05/02 21:24:19 kevin Exp $
+;;;; $Id: sql-classes.lisp,v 1.18 2003/05/02 21:49:19 kevin Exp $
;;;;
;;;; This file, part of UMLisp, is
;;;; Copyright (c) 2000-2002 by Kevin M. Rosenberg, M.D.
(defun current-srl! (srl)
(setq *current-srl* srl))
-;;; Object lookups
-
-;;; Lookup functions for uterms,ustr in ucons
-
-(defun find-uterm-in-ucon (ucon lui)
- (find lui (s#term ucon) :key #'lui :test 'equal))
-
-(defun find-ustr-in-uterm (uterm sui)
- (find sui (s#str uterm) :key #'sui :test 'equal))
-
-(defun find-ustr-in-ucon (ucon sui)
- (let ((found-ustr nil))
- (dolist (uterm (s#term ucon))
- (unless found-ustr
- (dolist (ustr (s#str uterm))
- (unless found-ustr
- (when (string-equal sui (sui ustr))
- (setq found-ustr ustr))))))
- found-ustr))
(defmacro with-umlisp-query ((table fields srl where-name where-value
- &key (lrlname "KCUILRL") distinct single terminal like)
+ &key (lrlname "KCUILRL") distinct single
+ terminal like)
&body body)
(let ((query (gensym)))
`(unless (and ,where-name (not ,where-value))
- (let ((,query (umlisp-query ,table ,fields ,srl ,where-name ,where-value
- :lrlname ,lrlname :single ,single :distinct ,distinct
- :terminal ,terminal :like ,like)))
- (if ,single
- (let ((tuple (car ,query)))
- (when tuple
- ,@body))
- (loop
- for tuple in ,query
- collect
- ,@body))))))
-
+ (let ((,query (umlisp-query ,table ,fields ,srl ,where-name ,where-value
+ :lrlname ,lrlname :single ,single :distinct ,distinct
+ :terminal ,terminal :like ,like)))
+ (if ,single
+ (let ((tuple (car ,query)))
+ (when tuple
+ (destructuring-bind ,fields tuple
+ ,@body)))
+ (loop
+ for tuple in ,query collect
+ (destructuring-bind ,fields tuple
+ ,@body)))))))
+
(defun umlisp-query (table fields srl where-name where-value
&key (lrlname "KCUILRL") single distinct terminal like)
"Query the UMLisp database. Return a list of umlisp objects whose name
(defun find-ucon-cui (cui &key (srl *current-srl*))
"Find ucon for a cui"
- (with-umlisp-query ('mrcon '(kpfstr kcuilrl) srl 'cui (parse-cui cui) :single t)
+ (with-umlisp-query ('mrcon (kpfstr kcuilrl) srl 'cui (parse-cui cui) :single t)
(make-instance 'ucon :cui (parse-cui cui)
- :pfstr (car tuple)
- :lrl (ensure-integer (cadr tuple)))))
+ :pfstr kpfstr2
+ :lrl (ensure-integer kcuilrl))))
(defun find-ucon-cui-sans-pfstr (cui &key (srl *current-srl*))
"Find ucon for a cui"
- (with-umlisp-query ('mrcon '(kcuilrl) srl 'cui (parse-cui cui) :single t)
+ (with-umlisp-query ('mrcon (kcuilrl) srl 'cui (parse-cui cui) :single t)
(make-instance 'ucon :cui (parse-cui cui)
- :lrl (ensure-integer (car tuple))
+ :lrl (ensure-integer kcuilrl)
:pfstr nil)))
(defun find-pfstr-cui (cui &key (srl *current-srl*))
"Find preferred string for a cui"
- (with-umlisp-query ('mrcon '(kpfstr) srl 'cui (parse-cui cui) :single t)
- (car tuple)))
+ (with-umlisp-query ('mrcon (kpfstr) srl 'cui (parse-cui cui) :single t)
+ kpfstr))
(defun find-ucon-lui (lui &key (srl *current-srl*))
"Find list of ucon for lui"
- (with-umlisp-query ('mrcon '(cui kpfstr kcuilrl) srl 'lui (parse-lui lui) :distinct t)
- (destructuring-bind (cui pfstr lrl) tuple
- (make-instance 'ucon :cui (ensure-integer cui)
- :pfstr pfstr
- :lrl (ensure-integer lrl)))))
+ (with-umlisp-query ('mrcon (cui kpfstr kcuilrl) srl 'lui (parse-lui lui) :distinct t)
+ (make-instance 'ucon :cui (ensure-integer cui)
+ :pfstr kpfstr
+ :lrl (ensure-integer lrl))))
(defun find-ucon-sui (sui &key (srl *current-srl*))
"Find list of ucon for sui"
- (with-umlisp-query ('mrcon '(cui kpfstr kcuilrl) srl 'sui (parse-sui sui) :distinct t)
- (destructuring-bind (cui pfstr lrl) tuple
- (make-instance 'ucon :cui (ensure-integer cui)
- :pfstr pfstr
- :lrl (ensure-integer lrl)))))
+ (with-umlisp-query ('mrcon (cui kpfstr kcuilrl) srl 'sui (parse-sui sui) :distinct t)
+ (make-instance 'ucon :cui (ensure-integer cui)
+ :pfstr kpfstr
+ :lrl (ensure-integer kcuilrl)))))
(defun find-ucon-cuisui (cui sui &key (srl *current-srl*))
"Find ucon for cui/sui"
(when (and cui sui)
- (with-umlisp-query ('mrcon '(cui kpfstr kcuilrl) srl 'kcuisui
+ (with-umlisp-query ('mrcon (cui kpfstr kcuilrl) srl 'kcuisui
(make-cuisui (parse-cui cui) (parse-sui sui)))
- (destructuring-bind (cui pfstr lrl) tuple
- (make-instance 'ucon :cui (ensure-integer cui)
- :pfstr pfstr
- :lrl (ensure-integer lrl))))))
+ (make-instance 'ucon :cui (ensure-integer cui)
+ :pfstr kpfstr
+ :lrl (ensure-integer kcuilrl)))))
(defun find-ucon-str (str &key (srl *current-srl*))
"Find ucon that are exact match for str"
- (with-umlisp-query ('mrcon '(cui kpfstr kcuilrl) srl 'str str :distinct t)
- (destructuring-bind (cui pfstr lrl) tuple
- (make-instance 'ucon :cui (ensure-integer cui)
- :pfstr pfstr
- :lrl (ensure-integer lrl)))))
+ (with-umlisp-query ('mrcon (cui kpfstr kcuilrl) srl 'str str :distinct t)
+ (make-instance 'ucon :cui (ensure-integer cui)
+ :pfstr kpfstr
+ :lrl (ensure-integer kcuilrl))))
(defun find-ucon-all (&key (srl *current-srl*))
"Return list of all ucon's"
(defun find-udef-cui (cui &key (srl *current-srl*))
"Return a list of udefs for cui"
- (with-umlisp-query ('mrdef '(sab def) srl 'cui (parse-cui cui) :lrlname "KSRL")
- (destructuring-bind (sab def) tuple
- (make-instance 'udef :sab sab :def def))))
+ (with-umlisp-query ('mrdef (sab def) srl 'cui (parse-cui cui) :lrlname "KSRL")
+ (make-instance 'udef :sab sab :def def)))
(defun find-usty-cui (cui &key (srl *current-srl*))
"Return a list of usty for cui"
- (with-umlisp-query ('mrsty '(tui sty) srl 'cui (parse-cui cui) :lrlname "KLRL")
- (destructuring-bind (tui sty) tuple
- (make-instance 'usty :tui (ensure-integer tui) :sty sty))))
+ (with-umlisp-query ('mrsty (tui sty) srl 'cui (parse-cui cui) :lrlname "KLRL")
+ (make-instance 'usty :tui (ensure-integer tui) :sty sty)))
(defun find-usty-word (word &key (srl *current-srl*))
"Return a list of usty that match word"
- (with-umlisp-query ('mrsty '(tui sty) srl 'sty word :lrlname 'klrl :like t :distinct t)
- (destructuring-bind (tui sty) tuple
- (make-instance 'usty :tui (ensure-integer tui) :sty sty))))
+ (with-umlisp-query ('mrsty (tui sty) srl 'sty word :lrlname 'klrl :like t :distinct t)
+ (make-instance 'usty :tui (ensure-integer tui) :sty sty)))
(defun find-urel-cui (cui &key (srl *current-srl*))
"Return a list of urel for cui"
- (with-umlisp-query ('mrrel '(rel cui2 rela sab sl mg kpfstr2) srl 'cui1 (parse-cui cui) :lrlname "KSRL")
- (destructuring-bind (rel cui2 rela sab sl mg pfstr2) tuple
- (make-instance 'urel :cui1 (parse-cui cui) :rel rel :cui2 (ensure-integer cui2) :rela rela
- :sab sab :sl sl :mg mg :pfstr2 pfstr2))))
+ (with-umlisp-query ('mrrel (rel cui2 rela sab sl mg kpfstr2) srl 'cui1 (parse-cui cui) :lrlname "KSRL")
+ (make-instance 'urel :cui1 (parse-cui cui) :rel rel :cui2 (ensure-integer cui2) :rela rela
+ :sab sab :sl sl :mg mg :pfstr2 kpfstr2)))
(defun find-urel-cui2 (cui2 &key (srl *current-srl*))
"Return a list of urel for cui2"
- (with-umlisp-query ('mrrel '(rel cui1 rela sab sl mg kpfstr2) srl 'cui2 (parse-cui cui2) :lrlname "KSRL")
- (destructuring-bind (rel cui1 rela sab sl mg pfstr2) tuple
- (make-instance 'urel :cui2 (parse-cui cui2) :rel rel :cui1 (ensure-integer cui1) :rela rela
- :sab sab :sl sl :mg mg :pfstr2 pfstr2))))
+ (with-umlisp-query ('mrrel (rel cui1 rela sab sl mg kpfstr2) srl 'cui2 (parse-cui cui2) :lrlname "KSRL")
+ (make-instance 'urel :cui2 (parse-cui cui2) :rel rel :cui1 (ensure-integer cui1) :rela rela
+ :sab sab :sl sl :mg mg :pfstr2 kpfstr2))))
(defun find-ucon-rel-cui2 (cui2 &key (srl *current-srl*))
(mapcar
(defun find-ucoc-cui (cui &key (srl *current-srl*))
"Return a list of ucoc for cui"
- (with-umlisp-query ('mrcoc '(cui2 soc cot cof coa kpfstr2) srl 'cui1 (parse-cui cui)
+ (with-umlisp-query ('mrcoc (cui2 soc cot cof coa kpfstr2) srl 'cui1 (parse-cui cui)
:lrlname "KSRL" :terminal "order by COF asc")
- (destructuring-bind (cui2 soc cot cof coa pfstr2) tuple
- (setq cui2 (ensure-integer cui2))
- (when (zerop cui2) (setq cui2 nil))
- (make-instance 'ucoc :cui1 (parse-cui cui) :cui2 (ensure-integer cui2) :soc soc :cot cot
- :cof (ensure-integer cof) :coa coa :pfstr2 pfstr2))))
+ (setq cui2 (ensure-integer cui2))
+ (when (zerop cui2) (setq cui2 nil))
+ (make-instance 'ucoc :cui1 (parse-cui cui) :cui2 (ensure-integer cui2) :soc soc :cot cot
+ :cof (ensure-integer cof) :coa coa :pfstr2 kpfstr2)))
(defun find-ucoc-cui2 (cui2 &key (srl *current-srl*))
"Return a list of ucoc for cui2"
- (with-umlisp-query ('mrcoc '(cui1 soc cot cof coa kpfstr2) srl 'cui2 (parse-cui cui2)
+ (with-umlisp-query ('mrcoc (cui1 soc cot cof coa kpfstr2) srl 'cui2 (parse-cui cui2)
:lrlname "KSRL" :terminal "order by COF asc")
- (destructuring-bind (cui1 soc cot cof coa pfstr2) tuple
- (setq cui2 (ensure-integer cui2))
- (when (zerop cui2) (setq cui2 nil))
- (make-instance 'ucoc :cui1 (ensure-integer cui1) :cui2 (parse-cui cui2) :soc soc :cot cot
- :cof (ensure-integer cof) :coa coa :pfstr2 pfstr2))))
+ (setq cui2 (ensure-integer cui2))
+ (when (zerop cui2) (setq cui2 nil))
+ (make-instance 'ucoc :cui1 (ensure-integer cui1) :cui2 (parse-cui cui2) :soc soc :cot cot
+ :cof (ensure-integer cof) :coa coa :pfstr2 kpfstr2)))
(defun find-ucon-coc-cui2 (cui2 &key (srl *current-srl*))
"List of ucon with co-occurance cui2"
(defun find-ulo-cui (cui &key (srl *current-srl*))
"Return a list of ulo for cui"
- (with-umlisp-query ('mrlo '(isn fr un sui sna soui) srl 'cui (parse-cui cui) :lrlname "KLRL")
- (destructuring-bind (isn fr un sui sna soui) tuple
- (make-instance 'ulo :isn isn :fr (ensure-integer fr) :un un :sui (ensure-integer sui) :sna sna
- :soui soui))))
+ (with-umlisp-query ('mrlo (isn fr un sui sna soui) srl 'cui (parse-cui cui) :lrlname "KLRL")
+ (make-instance 'ulo :isn isn :fr (ensure-integer fr) :un un :sui (ensure-integer sui) :sna sna
+ :soui soui)))
(defgeneric suistr (lo))
(defmethod suistr ((lo ulo))
(defun find-uatx-cui (cui &key (srl *current-srl*))
"Return a list of uatx for cui"
- (with-umlisp-query ('mratx '(sab rel atx) srl 'cui (parse-cui cui) :lrlname 'ksrl)
- (destructuring-bind (sab rel atx) tuple
- (make-instance 'uatx :sab sab :rel rel :atx atx))))
+ (with-umlisp-query ('mratx (sab rel atx) srl 'cui (parse-cui cui) :lrlname 'ksrl)
+ (make-instance 'uatx :sab sab :rel rel :atx atx)))
(defun find-uterm-cui (cui &key (srl *current-srl*))
"Return a list of uterm for cui"
- (with-umlisp-query ('mrcon '(lui lat ts kluilrl) srl 'cui (parse-cui cui) :lrlname 'kluilrl
+ (with-umlisp-query ('mrcon (lui lat ts kluilrl) srl 'cui (parse-cui cui) :lrlname 'kluilrl
:distinct t)
- (destructuring-bind (lui lat ts lrl) tuple
- (make-instance 'uterm :lui (ensure-integer lui) :cui (parse-cui cui)
- :lat lat :ts ts :lrl (ensure-integer lrl)))))
+ (make-instance 'uterm :lui (ensure-integer lui) :cui (parse-cui cui)
+ :lat lat :ts ts :lrl (ensure-integer lrl))))
(defun find-uterm-lui (lui &key (srl *current-srl*))
"Return a list of uterm for lui"
- (with-umlisp-query ('mrcon '(cui lat ts kluilrl) srl 'lui (parse-lui lui)
+ (with-umlisp-query ('mrcon (cui lat ts kluilrl) srl 'lui (parse-lui lui)
:lrlname 'kluilrl :distinct t)
- (destructuring-bind (cui lat ts lrl) tuple
- (make-instance 'uterm :cui (ensure-integer cui) :lui (parse-lui lui)
- :lat lat :ts ts :lrl (ensure-integer lrl)))))
+ (make-instance 'uterm :cui (ensure-integer cui) :lui (parse-lui lui)
+ :lat lat :ts ts :lrl (ensure-integer kluilrl))))
(defun find-uterm-cuilui (cui lui &key (srl *current-srl*))
"Return single uterm for cui/lui"
- (with-umlisp-query ('mrcon '(lat ts kluilrl) srl 'kcuilui
+ (with-umlisp-query ('mrcon (lat ts kluilrl) srl 'kcuilui
(make-cuilui (parse-cui cui) (parse-lui lui))
:lrlname 'kluilrl :single t)
- (destructuring-bind (lat ts lrl) tuple
- (make-instance 'uterm :cui cui :lui lui :lat lat :ts ts :lrl (ensure-integer lrl)))))
+ (make-instance 'uterm :cui cui :lui lui :lat lat :ts ts :lrl (ensure-integer kluilrl)))))
(defun find-ustr-cuilui (cui lui &key (srl *current-srl*))
"Return a list of ustr for cui/lui"
- (with-umlisp-query ('mrcon '(sui stt str lrl) srl 'kcuilui (make-cuilui cui lui) :lrlname 'lrl)
- (destructuring-bind (sui stt str lrl) tuple
- (make-instance 'ustr :sui (ensure-integer sui) :cui cui :lui lui
- :cuisui (make-cuisui cui sui) :stt stt :str str
- :lrl (ensure-integer lrl)))))
+ (with-umlisp-query ('mrcon (sui stt str lrl) srl 'kcuilui (make-cuilui cui lui) :lrlname 'lrl)
+ (make-instance 'ustr :sui (ensure-integer sui) :cui cui :lui lui
+ :cuisui (make-cuisui cui sui) :stt stt :str str
+ :lrl (ensure-integer lrl))))
(defun find-ustr-cuisui (cui sui &key (srl *current-srl*))
"Return the single ustr for cuisui"
- (with-umlisp-query ('mrcon '(lui stt str lrl) srl 'kcuisui (make-cuisui cui sui) :lrlname 'lrl :single t)
- (destructuring-bind (lui stt str lrl) tuple
- (make-instance 'ustr :sui sui :cui cui :cuisui (make-cuisui cui sui)
- :lui (ensure-integer lui) :stt stt :str str :lrl (ensure-integer lrl)))))
+ (with-umlisp-query ('mrcon (lui stt str lrl) srl 'kcuisui (make-cuisui cui sui) :lrlname 'lrl :single t)
+ (make-instance 'ustr :sui sui :cui cui :cuisui (make-cuisui cui sui)
+ :lui (ensure-integer lui) :stt stt :str str :lrl (ensure-integer lrl))))
(defun find-ustr-sui (sui &key (srl *current-srl*))
"Return the list of ustr for sui"
- (with-umlisp-query ('mrcon '(cui lui stt str lrl) srl 'sui (parse-sui sui) :lrlname 'lrl)
- (destructuring-bind (cui lui stt str lrl) tuple
- (make-instance 'ustr :sui sui :cui cui :stt stt :str str
- :cuisui (make-cuisui (ensure-integer cui) (parse-sui sui))
- :lui (ensure-integer lui)
- :lrl (ensure-integer lrl)))))
+ (with-umlisp-query ('mrcon (cui lui stt str lrl) srl 'sui (parse-sui sui) :lrlname 'lrl)
+ (make-instance 'ustr :sui sui :cui cui :stt stt :str str
+ :cuisui (make-cuisui (ensure-integer cui) (parse-sui sui))
+ :lui (ensure-integer lui)
+ :lrl (ensure-integer lrl))))
(defun find-ustr-sab (sab &key (srl *current-srl*))
"Return the list of ustr for sab"
(car tuple)))
(defun find-uso-cuisui (cui sui &key (srl *current-srl*))
- (with-umlisp-query ('mrso '(sab code srl tty) srl 'kcuisui (make-cuisui cui sui) :lrlname 'srl)
- (destructuring-bind (sab code srl tty) tuple
- (make-instance 'uso :sab sab :code code :srl srl :tty tty))))
+ (with-umlisp-query ('mrso (sab code srl tty) srl 'kcuisui (make-cuisui cui sui) :lrlname 'srl)
+ (make-instance 'uso :sab sab :code code :srl srl :tty tty)))
(defun find-ucxt-cuisui (cui sui &key (srl *current-srl*))
- (with-umlisp-query ('mrcxt '(sab code cxn cxl rnk cxs cui2 hcd rela cx) srl 'kcuisui
+ (with-umlisp-query ('mrcxt (sab code cxn cxl rnk cxs cui2 hcd rela cx) srl 'kcuisui
(make-cuisui cui sui) :lrlname 'ksrl)
- (destructuring-bind (sab code cxn cxl rnk cxs cui2 hcd rela xc) tuple
- (make-instance 'ucxt :sab sab :code code
- :cxn (ensure-integer cxn)
- :cxl cxl :cxs cxs :hcd hcd :rela rela :xc xc
- :rnk (ensure-integer rnk)
- :cui2 (ensure-integer cui2)))))
+ (make-instance 'ucxt :sab sab :code code
+ :cxn (ensure-integer cxn)
+ :cxl cxl :cxs cxs :hcd hcd :rela rela :xc xc
+ :rnk (ensure-integer rnk)
+ :cui2 (ensure-integer cui2))))
(defun find-usat-ui (cui &optional (lui nil) (sui nil) &key (srl *current-srl*))
(let ((ls (format nil "select CODE,ATN,SAB,ATV from MRSAT where ")))
(cond
- (sui (string-append ls (format nil "KCUISUI=~d" (make-cuisui cui sui))))
- (lui (string-append ls (format nil "KCUILUI=~d and sui=0" (make-cuilui cui lui))))
- (t (string-append ls (format nil "cui=~d and lui=0 and sui=0" cui))))
+ (sui (string-append ls (format nil "KCUISUI=~d" (make-cuisui cui sui))))
+ (lui (string-append ls (format nil "KCUILUI=~d and sui=0" (make-cuilui cui lui))))
+ (t (string-append ls (format nil "cui=~d and lui=0 and sui=0" cui))))
(when srl
- (string-append ls (format nil " and KSRL <= ~d" srl)))
+ (string-append ls (format nil " and KSRL <= ~d" srl)))
(let ((usats '()))
(dolist (tuple (mutex-sql-query ls))
(destructuring-bind (code atn sab atv) tuple
(defun find-usty-tui (tui)
"Find usty for tui"
- (with-umlisp-query ('mrsty '(sty) nil 'tui (parse-tui tui) :single t)
- (make-instance 'usty :tui (parse-tui tui) :sty (car tuple))))
+ (with-umlisp-query ('mrsty (sty) nil 'tui (parse-tui tui) :single t)
+ (make-instance 'usty :tui (parse-tui tui) :sty sty)))
(defun find-usty-sty (sty)
"Find usty for a sty"
- (with-umlisp-query ('mrsty '(tui) nil 'sty sty :single t)
- (make-instance 'usty :tui (ensure-integer (car tuple)) :sty sty)))
+ (with-umlisp-query ('mrsty (tui) nil 'sty sty :single t)
+ (make-instance 'usty :tui (ensure-integer tui) :sty sty)))
(defun find-usty-all ()
"Return list of usty's for all semantic types"
(with-umlisp-query ('mrsty '(tui) nil nil nil :distinct t)
- (find-usty-tui (car tuple))))
+ (find-usty-tui tui)))
(defun find-usab-all ()
"Find usab for a key"
- (with-umlisp-query ('mrsab '(vcui rcui vsab rsab son sf sver mstart mend imeta rmeta slc scc srl tfr cfr cxty ttyl atnl lat cenc curver sabin) nil nil nil)
- (destructuring-bind
- (vcui rcui vsab rsab son sf sver mstart mend imeta rmeta slc scc srl tfr cfr cxty ttyl atnl lat cenc curver sabin) tuple
- (make-instance 'usab :vcui (ensure-integer vcui)
- :rcui (ensure-integer rcui)
- :vsab vsab :rsab rsab :son son :sf sf :sver sver :mstart mstart
- :mend mend :imeta imeta :rmeta rmeta :slc slc :scc scc
- :srl (ensure-integer srl)
- :tfr (ensure-integer tfr) :cfr (ensure-integer cfr)
- :cxty cxty :ttyl ttyl :atnl atnl :lat lat :cenc cenc
- :curver curver :sabin sabin))))
+ (with-umlisp-query ('mrsab (vcui rcui vsab rsab son sf sver mstart mend imeta rmeta slc scc srl tfr cfr cxty ttyl atnl lat cenc curver sabin) nil nil nil)
+ (make-instance 'usab :vcui (ensure-integer vcui)
+ :rcui (ensure-integer rcui)
+ :vsab vsab :rsab rsab :son son :sf sf :sver sver :mstart mstart
+ :mend mend :imeta imeta :rmeta rmeta :slc slc :scc scc
+ :srl (ensure-integer srl)
+ :tfr (ensure-integer tfr) :cfr (ensure-integer cfr)
+ :cxty cxty :ttyl ttyl :atnl atnl :lat lat :cenc cenc
+ :curver curver :sabin sabin)))
(defun find-usab-by-key (key-name key)
"Find usab for a key"
- (with-umlisp-query ('mrsab '(vcui rcui vsab rsab son sf sver mstart mend imeta rmeta slc scc srl tfr cfr cxty ttyl atnl lat cenc curver sabin) nil key-name key :single t)
- (destructuring-bind
- (vcui rcui vsab rsab son sf sver mstart mend imeta rmeta slc scc srl tfr cfr cxty ttyl atnl lat cenc curver sabin) tuple
- (make-instance 'usab :vcui (ensure-integer vcui)
- :rcui (ensure-integer rcui)
- :vsab vsab :rsab rsab :son son :sf sf :sver sver :mstart mstart
- :mend mend :imeta imeta :rmeta rmeta :slc slc :scc scc
- :srl (ensure-integer srl)
- :tfr (ensure-integer tfr) :cfr (ensure-integer cfr)
- :cxty cxty :ttyl ttyl :atnl atnl :lat lat :cenc cenc
- :curver curver :sabin sabin))))
+ (with-umlisp-query ('mrsab (vcui rcui vsab rsab son sf sver mstart mend imeta rmeta slc scc srl tfr cfr cxty ttyl atnl lat cenc curver sabin) nil key-name key :single t)
+ (make-instance 'usab :vcui (ensure-integer vcui)
+ :rcui (ensure-integer rcui)
+ :vsab vsab :rsab rsab :son son :sf sf :sver sver :mstart mstart
+ :mend mend :imeta imeta :rmeta rmeta :slc slc :scc scc
+ :srl (ensure-integer srl)
+ :tfr (ensure-integer tfr) :cfr (ensure-integer cfr)
+ :cxty cxty :ttyl ttyl :atnl atnl :lat lat :cenc cenc
+ :curver curver :sabin sabin)))
(defun find-usab-rsab (rsab)
"Find usab for rsab"
(defun find-ucon-tui (tui &key (srl *current-srl*))
"Find list of ucon for tui"
- (with-umlisp-query ('mrsty '(cui) srl 'tui (parse-tui tui) :lrlname 'klrl :terminal "order by cui desc")
- (find-ucon-cui (ensure-integer (car tuple)) :srl srl)))
+ (with-umlisp-query ('mrsty (cui) srl 'tui (parse-tui tui) :lrlname 'klrl :terminal "order by cui desc")
+ (find-ucon-cui (ensure-integer cui) :srl srl)))
(defun find-ucon-word (word &key (srl *current-srl*) (like nil))
"Return list of ucons that match word. Optionally, use SQL's LIKE syntax"
- (let ((ucons '())
- (ls (format nil "select distinct cui from MRXW_ENG where wd~A'~A'"
- (if like " LIKE " "=")
- word)))
- (when srl (string-append ls (format nil " and KLRL <= ~d" srl)))
- (string-append ls " order by cui desc")
- (dolist (tuple (mutex-sql-query ls))
- (push (find-ucon-cui (car tuple) :srl srl) ucons))
- ucons))
+ (with-umlisp-query ('mrxw_eng (cui) srl 'wd word :like like :distinct t
+ :lrlname 'klrl :terminal "order by cui desc")
+ (find-ucon-cui cui :srl srl)))
(defun find-ucon-normalized-word (word &key (srl *current-srl*) (like nil))
"Return list of ucons that match word, optionally use SQL's LIKE syntax"
- (let ((ucons '())
- (ls (format nil "select distinct cui from MRXNW_ENG where nwd~A'~A'"
- (if like " LIKE " "=")
- word)))
- (when srl (string-append ls (format nil " and KLRL <= ~d" srl)))
- (string-append ls " order by cui desc")
- (dolist (tuple (mutex-sql-query ls))
- (push (find-ucon-cui (car tuple) :srl srl) ucons))
- ucons))
+ (with-umlisp-query ('mrxnw_eng (cui) srl 'nwd word :like like :distinct t
+ :lrlname 'klrl :terminal "order by cui desc")
+ (find-ucon-cui cui :srl srl)))
(defun find-ustr-word (word &key (srl *current-srl*))
"Return list of ustrs that match word"
- (with-umlisp-query ('mrxw_eng '(cui sui) srl 'wd word
+ (with-umlisp-query ('mrxw_eng (cui sui) srl 'wd word
:lrlname 'klrl
:terminal "order by cui desc, sui desc")
- (destructuring-bind (cui sui) tuple
- (find-ustr-cuisui (ensure-integer cui) (ensure-integer sui) :srl srl))))
+ (find-ustr-cuisui (ensure-integer cui) (ensure-integer sui) :srl srl)))
(defun find-ustr-normalized-word (word &key (srl *current-srl*))
"Return list of ustrs that match word"
- (with-umlisp-query ('mrxnw_eng '(cui sui) srl 'nwd word :lrlname 'klrl
+ (with-umlisp-query ('mrxnw_eng (cui sui) srl 'nwd word :lrlname 'klrl
:terminal "order by cui desc, sui desc")
- (destructuring-bind (cui sui) tuple
- (find-ustr-cuisui (ensure-integer cui) (ensure-integer sui) ;srl srl))))
+ (find-ustr-cuisui (ensure-integer cui) (ensure-integer sui) :srl srl)))
;; Special tables
(defun find-usrl-all ()
- (with-umlisp-query ('usrl '(sab srl) nil nil nil :terminal "order by sab desc")
- (destructuring-bind (sab srl) tuple
- (make-instance 'usrl :sab sab :srl (ensure-integer srl)) usrls)))
+ (with-umlisp-query ('usrl (sab srl) nil nil nil :terminal "order by sab desc")
+ (make-instance 'usrl :sab sab :srl (ensure-integer srl)) usrls))
;;; Multiword lookup and score functions
;;; LEX SQL functions
(defun find-lexterm-eui (eui)
- (with-umlisp-query ('lrwd '(wrd) nil 'eui eui :single t)
- (make-instance 'lexterm :eui eui :wrd (car tuple))))
+ (with-umlisp-query ('lrwd (wrd) nil 'eui eui :single t)
+ (make-instance 'lexterm :eui eui :wrd wrd)))
(defun find-lexterm-word (wrd)
- (with-umlisp-query ('lrwd '(eui) nil 'wrd wrd)
- (make-instance 'lexterm :eui (ensure-integer (car tuple))
+ (with-umlisp-query ('lrwd (eui) nil 'wrd wrd)
+ (make-instance 'lexterm :eui (ensure-integer eui)
:wrd (copy-seq wrd))))
;; LEX SQL Read functions
(defun find-labr-eui (eui)
- (with-umlisp-query ('lrabr '(bas abr eui2 bas2) nil 'eui eui)
- (destructuring-bind (bas abr eui2 bas2) tuple
- (make-instance 'labr :eui eui :bas bas :abr abr :bas2 bas2
- :eui2 (ensure-integer eui2)))))
+ (with-umlisp-query ('lrabr (bas abr eui2 bas2) nil 'eui eui)
+ (make-instance 'labr :eui eui :bas bas :abr abr :bas2 bas2
+ :eui2 (ensure-integer eui2))))
(defun find-labr-bas (bas)
- (with-umlisp-query ('labr '(eui abr eui2 bas2) nil 'bas bas)
- (destructuring-bind (eui abr eui2 bas2) tuple
- (make-instance 'labr :eui (ensure-integer eui) :abr abr :bas2 bas2
- :bas (copy-seq bas) :eui2 (ensure-integer eui2)))))
+ (with-umlisp-query ('labr (eui abr eui2 bas2) nil 'bas bas)
+ (make-instance 'labr :eui (ensure-integer eui) :abr abr :bas2 bas2
+ :bas (copy-seq bas) :eui2 (ensure-integer eui2))))
(defun find-lagr-eui (eui)
- (with-umlisp-query ('lragr '(str sca agr cit bas) nil 'eui eui)
- (destructuring-bind (str sca agr cit bas) tuple
- (make-instance 'lagr :eui eui :str str :sca sca :agr agr
- :cit cit :bas bas))))
+ (with-umlisp-query ('lragr (str sca agr cit bas) nil 'eui eui)
+ (make-instance 'lagr :eui eui :str str :sca sca :agr agr
+ :cit cit :bas bas)))
(defun find-lcmp-eui (eui)
- (with-umlisp-query ('lrcmp '(bas sca com) nil 'eui eui)
- (destructuring-bind (bas sca com) tuple
- (make-instance 'lcmp :eui eui :bas bas :sca sca :com com))))
+ (with-umlisp-query ('lrcmp (bas sca com) nil 'eui eui)
+ (make-instance 'lcmp :eui eui :bas bas :sca sca :com com)))
(defun find-lmod-eui (eui)
- (with-umlisp-query ('lrmod '(bas sca psn_mod fea) nil 'eui eui)
- (destructuring-bind (bas sca psnmod fea) tuple
- (make-instance 'lmod :eui eui :bas bas :sca sca :psnmod psnmod :fea fea))))
+ (with-umlisp-query ('lrmod (bas sca psn_mod fea) nil 'eui eui)
+ (make-instance 'lmod :eui eui :bas bas :sca sca :psnmod psnmod :fea fea)))
(defun find-lnom-eui (eui)
- (with-umlisp-query ('lrnom '(bas sca eui2 bas2 sca2) nil 'eui eui)
- (destructuring-bind (bas sca eui2 bas2 sca2) tuple
- (make-instance 'lnom :eui eui :bas bas :sca sca :bas2 bas2 :sca2 sca2
- :eui2 (ensure-integer eui2)))))
+ (with-umlisp-query ('lrnom (bas sca eui2 bas2 sca2) nil 'eui eui)
+ (make-instance 'lnom :eui eui :bas bas :sca sca :bas2 bas2 :sca2 sca2
+ :eui2 (ensure-integer eui2))))
(defun find-lprn-eui (eui)
- (with-umlisp-query ('lrprn '(bas num gnd cas pos qnt fea) nil 'eui eui)
- (destructuring-bind (bas num gnd cas pos qnt fea) tuple
- (make-instance 'lprn :eui eui :bas bas :num num :gnd gnd
- :cas cas :pos pos :qnt qnt :fea fea))))
+ (with-umlisp-query ('lrprn (bas num gnd cas pos qnt fea) nil 'eui eui)
+ (make-instance 'lprn :eui eui :bas bas :num num :gnd gnd
+ :cas cas :pos pos :qnt qnt :fea fea)))
(defun find-lprp-eui (eui)
- (with-umlisp-query ('lrprp '(bas str sca fea) nil 'eui eui)
- (destructuring-bind (bas str sca fea) tuple
- (make-instance 'lprp :eui eui :bas bas :str str :sca sca :fea fea))))
+ (with-umlisp-query ('lrprp (bas str sca fea) nil 'eui eui)
+ (make-instance 'lprp :eui eui :bas bas :str str :sca sca :fea fea)))
(defun find-lspl-eui (eui)
- (with-umlisp-query ('lrspl '(spv bas) nil 'eui eui)
- (destructuring-bind (spv bas) tuple
- (make-instance 'lspl :eui eui :spv spv :bas bas))))
+ (with-umlisp-query ('lrspl (spv bas) nil 'eui eui)
+ (make-instance 'lspl :eui eui :spv spv :bas bas)))
(defun find-ltrm-eui (eui)
- (with-umlisp-query ('lrtrm '(bas gen) nil 'eui eui)
+ (with-umlisp-query ('lrtrm (bas gen) nil 'eui eui)
(make-instance 'ltrm :eui eui :bas bas :gen gen)))
(defun find-ltyp-eui (eui)
- (with-umlisp-query ('lrtyp '(bas sca typ) nil 'eui eui)
- (destructuring-bind (bas sca typ) tuple
- (make-instance 'ltyp :eui eui :bas bas :sca sca :typ typ))))
+ (with-umlisp-query ('lrtyp (bas sca typ) nil 'eui eui)
+ (make-instance 'ltyp :eui eui :bas bas :sca sca :typ typ)))
(defun find-lwd-wrd (wrd)
(make-instance 'lwd :wrd
- :euilist (with-umlisp-query ('lrwd '(eui) nil 'wrd wrd)
- (ensure-integer (car tuple)))))
+ :euilist (with-umlisp-query ('lrwd (eui) nil 'wrd wrd)
+ (ensure-integer eui))))
;;; Semantic Network SQL access functions
-
+
(defun find-sdef-ui (ui)
- (with-umlisp-query ('srdef '(rt sty_rl stn_rtn def ex un rh abr rin)
+ (with-umlisp-query ('srdef (rt sty_rl stn_rtn def ex un rh abr rin)
nil 'ui ui :single t)
- (destructuring-bind (rt styrl stnrtn def ex un rh abr rin) tuple
- (make-instance 'sdef :rt rt :ui ui :styrl styrl :stnrtn stnrtn
- :def def :ex ex :un un :rh rh :abr abr :rin rin))))
+ (make-instance 'sdef :rt rt :ui ui :styrl styrl :stnrtn stnrtn
+ :def def :ex ex :un un :rh rh :abr abr :rin rin)))
(defun find-sstre1-ui (ui)
- (with-umlisp-query ('srstre1 '(ui2 ui3) nil 'ui ui)
- (destructuring-bind (ui2 ui3) tuple
- (make-instance 'sstre1 :ui ui :ui2 (ensure-integer ui2)
- :ui3 (ensure-integer ui3)))))
+ (with-umlisp-query ('srstre1 (ui2 ui3) nil 'ui ui)
+ (make-instance 'sstre1 :ui ui :ui2 (ensure-integer ui2)
+ :ui3 (ensure-integer ui3))))
(defun find-sstre1-ui2 (ui2)
- (with-umlisp-query ('srstre1 '(ui ui3) nil 'ui2 ui2)
- (destructuring-bind (ui ui3) tuple
- (make-instance 'sstre1 :ui (ensure-integer ui) :ui2 ui2
- :ui3 (ensure-integer ui3)))))
+ (with-umlisp-query ('srstre1 (ui ui3) nil 'ui2 ui2)
+ (make-instance 'sstre1 :ui (ensure-integer ui) :ui2 ui2
+ :ui3 (ensure-integer ui3))))
(defun find-sstr-rl (rl)
- (with-umlisp-query ('srstre '(sty_rl sty_rl2 ls) nil 'rl rl)
- (destructuring-bind (styrl styrl2 ls) tuple
- (make-instance 'sstr :rl rl :styrl styrl :styrl2 styrl2 :ls ls))))
+ (with-umlisp-query ('srstre (sty_rl sty_rl2 ls) nil 'rl rl)
+ (make-instance 'sstr :rl rl :styrl styrl :styrl2 styrl2 :ls ls)))
(defun find-sstre2-sty (sty)
- (with-umlisp-query ('srstre2 '(rl sty2) nil 'sty sty)
- (destructuring-bind (rl sty2) tuple
- (make-instance 'sstre2 :sty (copy-seq sty) :rl rl :sty2 sty2))))
+ (with-umlisp-query ('srstre2 (rl sty2) nil 'sty sty)
+ (make-instance 'sstre2 :sty (copy-seq sty) :rl rl :sty2 sty2)))
(defun find-sstr-styrl (styrl)
- (with-umlisp-query ('srstr '(rl sty_rl2 ls) nil 'styrl styrl)
- (destructuring-bind (rl styrl2 ls) tuple
- (make-instance 'sstr :styrl styrl :rl rl :styrl2 styrl2 :ls ls))))
+ (with-umlisp-query ('srstr (rl sty_rl2 ls) nil 'styrl styrl)
+ (make-instance 'sstr :styrl styrl :rl rl :styrl2 styrl2 :ls ls)))
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