1 ;;;; -*- Mode: Lisp; Syntax: ANSI-Common-Lisp; Base: 10; Package: umlisp -*-
2 ;;;; *************************************************************************
3 ;;;; FILE IDENTIFICATION
5 ;;;; Name: classes.lisp
6 ;;;; Purpose: Class defintions for UMLisp
7 ;;;; Programmer: Kevin M. Rosenberg
8 ;;;; Date Started: Apr 2000
10 ;;;; $Id: classes.lisp,v 1.31 2003/04/17 05:39:31 kevin Exp $
12 ;;;; This file, part of UMLisp, is
13 ;;;; Copyright (c) 2000-2002 by Kevin M. Rosenberg, M.D.
15 ;;;; UMLisp users are granted the rights to distribute and use this software
16 ;;;; as governed by the terms of the GNU General Public License.
17 ;;;; *************************************************************************
20 (declaim (optimize (speed 3) (safety 1) (compilation-speed 0) (debug 3)))
22 (defclass umlsclass (hyperobject)
24 (:metaclass hyperobject-class)
25 (:description "Parent class of all UMLS objects. It is based on the HYPEROBJECT-CLASS metaclass that provides object printing functions."))
28 (defclass usrl (umlsclass)
29 ((sab :value-type string :initarg :sab :reader sab)
30 (srl :value-type fixnum :initarg :srl :reader srl))
31 (:metaclass hyperobject-class)
32 (:user-name "Source Restriction Level")
33 (:default-print-slots sab srl)
34 (:description "Custom Table: Source Restriction Level"))
37 (defclass urank (umlsclass)
38 ((rank :value-type fixnum :initarg :rank :reader rank)
39 (sab :value-type string :initarg :sab :reader sab)
40 (tty :value-type string :initarg :tty :reader tty)
41 (supres :value-type string :initarg :supres :reader supres))
42 (:metaclass hyperobject-class)
44 (:default-print-slots rank sab tty supres))
46 (defclass udef (umlsclass)
47 ((def :value-type cdata :initarg :def :reader def)
48 (sab :value-type string :initarg :sab :reader sab :hyperlink find-usab-rsab))
49 (:metaclass hyperobject-class)
50 (:user-name "Definition")
51 (:default-print-slots sab def))
53 (defclass usat (umlsclass)
54 ((sab :value-type string :initarg :sab :reader sab :hyperlink find-usab-rsab)
55 (code :value-type string :initarg :code :reader code)
56 (atn :value-type string :initarg :atn :reader atn)
57 (atv :value-type cdata :initarg :atv :reader atv))
58 (:metaclass hyperobject-class)
59 (:user-name "Simple Attribute")
60 (:default-print-slots sab code atn atv))
62 (defclass usab (umlsclass)
63 ((vcui :value-type fixnum :initarg :vcui :reader vcui :print-formatter fmt-cui)
64 (rcui :value-type fixnum :initarg :rcui :reader rcui :print-formatter fmt-cui)
65 (vsab :value-type string :initarg :vsab :reader vsab)
66 (rsab :value-type string :initarg :rsab :reader rsab :hyperlink find-ucan-sab)
67 (son :value-type string :initarg :son :reader son)
68 (sf :value-type string :initarg :sf :reader sf)
69 (sver :value-type string :initarg :sver :reader sver)
70 (mstart :value-type string :initarg :mstart :reader mstart)
71 (mend :value-type string :initarg :mend :reader mend)
72 (imeta :value-type string :initarg :imeta :reader imeta)
73 (rmeta :value-type string :initarg :rmeta :reader rmeta)
74 (slc :value-type cdata :initarg :slc :reader slc)
75 (scc :value-type cdata :initarg :scc :reader scc)
76 (srl :value-type fixnum :initarg :srl :reader srl)
77 (tfr :value-type fixnum :initarg :tfr :reader tfr :print-formatter fmt-comma-integer)
78 (cfr :value-type fixnum :initarg :cfr :reader cfr :print-formatter fmt-comma-integer)
79 (cxty :value-type string :initarg :cxty :reader cxty)
80 (ttyl :value-type string :initarg :ttyl :reader ttyl)
81 (atnl :value-type string :initarg :atnl :reader atnl)
82 (lat :value-type string :initarg :lat :reader lat)
83 (cenc :value-type string :initarg :cenc :reader cenc)
84 (curver :value-type string :initarg :curver :reader curver)
85 (sabin :value-type string :initarg :sabin :reader sabin))
86 (:metaclass hyperobject-class)
87 (:user-name "Source Abbreviation")
88 (:default-print-slots vcui rcui vsab rsab son sf sver mstart mend imeta
89 rmeta slc scc srl tfr cfr cxty ttyl atnl lat cenc
92 (defclass uso (umlsclass)
93 ((sab :value-type string :initarg :sab :reader sab :hyperlink find-usab-rsab)
94 (code :value-type string :initarg :code :reader code)
95 (tty :value-type string :initarg :tty :reader tty :hyperlink find-btty-tty)
96 (srl :value-type fixnum :initarg :srl :reader srl))
97 (:metaclass hyperobject-class)
99 (:default-print-slots sab code tty srl))
101 (defclass ucxt (umlsclass)
102 ((sab :value-type string :initarg :sab :reader sab :hyperlink find-usab-rsab)
103 (code :value-type string :initarg :code :reader code)
104 (rnk :value-type fixnum :initarg :rnk :reader rnk)
105 (cxn :value-type fixnum :initarg :cxn :reader cxn)
106 (cxl :value-type string :initarg :cxl :reader cxl)
107 (cxs :value-type cdata :initarg :cxs :reader cxs)
108 (cui2 :value-type fixnum :initarg :cui2 :reader cui2 :hyperlink find-ucon-cui
109 :print-formatter fmt-cui)
110 (hcd :value-type string :initarg :hcd :reader hcd)
111 (rela :value-type string :initarg :rela :reader rela)
112 (xc :value-type string :initarg :xc :reader xc))
113 (:metaclass hyperobject-class)
114 (:user-name "Context")
115 (:default-print-slots sab code rnk cxn cxl hcd rela xc cui2 cxs))
117 (defclass ustr (umlsclass)
118 ((sui :value-type fixnum :initarg :sui :reader sui :print-formatter fmt-sui
119 :hyperlink find-ustr-sui)
120 (cui :value-type fixnum :initarg :cui :reader cui :print-formatter fmt-cui
121 :hyperlink find-ucon-cui)
122 (lui :value-type fixnum :initarg :lui :reader lui :print-formatter fmt-lui
123 :hyperlink find-uterm-lui)
124 (cuisui :value-type integer :initarg :cuisui :reader cuisui )
125 (str :value-type cdata :initarg :str :reader str)
126 (lrl :value-type fixnum :initarg :lrl :reader lrl)
127 (stt :value-type string :initarg :stt :reader stt)
128 (s#so :reader s#so :subobject (find-uso-cuisui cui sui))
129 (s#sat :reader s#sat :subobject (find-usat-ui cui lui sui))
130 (s#cxt :reader s#cxt :subobject (find-ucxt-cuisui cui sui)))
131 (:metaclass hyperobject-class)
132 (:user-name "String")
133 (:default-print-slots sui stt lrl str))
135 (defclass ulo (umlsclass)
136 ((isn :value-type string :initarg :isn :reader isn)
137 (fr :value-type fixnum :initarg :fr :reader fr)
138 (un :value-type string :initarg :un :reader un)
139 (sui :value-type fixnum :initarg :sui :reader sui :print-formatter fmt-sui)
140 (sna :value-type string :initarg :sna :reader sna)
141 (soui :value-type string :initarg :soui :reader soui))
142 (:metaclass hyperobject-class)
143 (:user-name "Locator")
144 (:default-print-slots isn fr un sna soui sui))
146 (defclass uterm (umlsclass)
147 ((lui :value-type fixnum :initarg :lui :reader lui :print-formatter fmt-lui
148 :hyperlink find-uterm-lui)
149 (cui :value-type fixnum :initarg :cui :reader cui :print-formatter fmt-cui
150 :hyperlink find-ucon-cui)
151 (lat :value-type string :initarg :lat :reader lat)
152 (ts :value-type string :initarg :ts :reader ts)
153 (lrl :value-type fixnum :initarg :lrl :reader lrl)
154 (s#str :reader s#str :subobject (find-ustr-cuilui cui lui))
155 (s#sat :reader s#sat :subobject (find-usat-ui cui lui)))
156 (:metaclass hyperobject-class)
158 (:default-print-slots lui lat ts lrl))
160 (defclass usty (umlsclass)
161 ((tui :value-type fixnum :initarg :tui :reader tui :print-formatter fmt-tui
162 :hyperlink (find-ucon-tui ("subobjects" "no")))
163 (sty :value-type string :initarg :sty :reader sty))
164 (:metaclass hyperobject-class)
165 (:user-name "Semantic Type")
166 (:default-print-slots tui sty))
168 (defclass urel (umlsclass)
169 ((rel :value-type string :initarg :rel :reader rel :hyperlink find-brel-rel)
170 (cui1 :value-type fixnum :initarg :cui1 :reader cui1 :print-formatter fmt-cui)
171 (cui2 :value-type fixnum :initarg :cui2 :reader cui2 :hyperlink find-ucon-sui
172 :print-formatter fmt-cui)
173 (pfstr2 :value-type cdata :initarg :pfstr2 :reader pfstr2)
174 (rela :value-type string :initarg :rela :reader rela)
175 (sab :value-type string :initarg :sab :reader sab :hyperlink find-usab-rsab)
176 (sl :value-type string :initarg :sl :reader sl)
177 (mg :value-type string :initarg :mg :reader mg))
178 (:metaclass hyperobject-class)
179 (:user-name "Relationship")
180 (:default-print-slots rel rela sab sl mg cui2 pfstr2))
182 (defclass ucoc (umlsclass)
183 ((cui1 :value-type fixnum :initarg :cui1 :reader cui1 :print-formatter fmt-cui)
184 (cui2 :value-type fixnum :initarg :cui2 :reader cui2 :print-formatter fmt-cui
185 :hyperlink find-ucon-cui)
186 (pfstr2 :value-type cdata :initarg :pfstr2 :reader pfstr2)
187 (soc :value-type string :initarg :soc :reader soc)
188 (cot :value-type string :initarg :cot :reader cot)
189 (cof :value-type fixnum :initarg :cof :reader cof)
190 (coa :value-type cdata :initarg :coa :reader coa))
191 (:metaclass hyperobject-class)
192 (:user-name "Co-occuring Concept")
193 (:default-print-slots soc cot cof coa cui2 pfstr2))
196 (defclass uatx (umlsclass)
197 ((sab :value-type string :initarg :sab :reader sab)
198 (rel :value-type string :initarg :rel :reader rel)
199 (atx :value-type cdata :initarg :atx :reader atx))
200 (:metaclass hyperobject-class)
201 (:user-name "Associated Expression")
202 (:default-print-slots sab rel atx))
204 (defclass ucon (umlsclass)
205 ((cui :value-type fixnum :initarg :cui :reader cui :print-formatter fmt-cui
206 :hyperlink find-ucon-cui)
207 (lrl :value-type fixnum :initarg :lrl :reader lrl)
208 (pfstr :value-type cdata :initarg :pfstr :reader pfstr)
209 (s#def :reader s#def :subobject (find-udef-cui cui))
210 (s#sty :reader s#sty :subobject (find-usty-cui cui))
211 (s#atx :reader s#atx :subobject (find-uatx-cui cui))
212 (s#lo :reader s#lo :subobject (find-ulo-cui cui))
213 (s#term :reader s#term :subobject (find-uterm-cui cui))
214 (s#sat :reader s#sat :subobject (find-usat-ui cui))
215 (s#rel :reader s#rel :subobject (find-urel-cui cui))
216 (s#coc :reader s#coc :subobject (find-ucoc-cui cui)))
217 (:metaclass hyperobject-class)
218 (:user-name "Concept")
219 (:default-print-slots cui lrl pfstr))
221 (defclass uxw (umlsclass)
222 ((wd :value-type string :initarg :wd :reader wd)
223 (cui :value-type fixnum :initform nil :initarg :cui :reader cui :print-formatter fmt-cui)
224 (lui :value-type fixnum :initform nil :initarg :lui :reader lui :print-formatter fmt-lui)
225 (sui :value-type fixnum :initform nil :initarg :sui :reader sui :print-formatter fmt-sui))
226 (:metaclass hyperobject-class)
227 (:user-name "XW Index")
228 (:default-print-slots wd cui lui sui))
230 (defclass uxnw (umlsclass)
231 ((lat :value-type string :initarg :lat :reader lat)
232 (nwd :value-type string :initarg :nwd :reader nwd)
233 (cuilist :value-type list :initarg :cuilist :reader uxnw-cuilist))
234 (:metaclass hyperobject-class)
235 (:user-name "XNW Index")
236 (:default-print-slots lat nwd cuilist))
238 (defclass uxns (umlsclass)
239 ((lat :value-type string :initarg :lat :reader lat)
240 (nstr :value-type string :initarg :nstr :reader nstr)
241 (cuilist :value-type list :initarg :cuilist :reader cuilist))
242 (:metaclass hyperobject-class)
243 (:user-name "XNS Index")
244 (:default-print-slots lat nstr cuilist))
249 (defclass lexterm (umlsclass)
250 ((eui :value-type fixnum :initarg :eui :reader eui :print-formatter fmt-eui
251 :hyperlink find-lexterm-eui)
252 (wrd :value-type string :initarg :wrd :reader wrd)
253 (s#abr :reader s#abr :subobject (find-labr-eui eui))
254 (s#agr :reader s#agr :subobject (find-lagr-eui eui))
255 (s#cmp :reader s#cmp :subobject (find-lcmp-eui eui))
256 (s#mod :reader s#mod :subobject (find-lmod-eui eui))
257 (s#nom :reader s#nom :subobject (find-lnom-eui eui))
258 (s#prn :reader s#prn :subobject (find-lprn-eui eui))
259 (s#prp :reader s#prp :subobject (find-lprp-eui eui))
260 (s#spl :reader s#spl :subobject (find-lspl-eui eui))
261 (s#trm :reader s#trm :subobject (find-ltrm-eui eui))
262 (s#typ :reader s#typ :subobject (find-ltyp-eui eui)))
263 (:metaclass hyperobject-class)
264 (:user-name "Lexical Term")
265 (:default-print-slots eui wrd))
268 (defclass labr (umlsclass)
269 ((eui :value-type integer :initarg :eui :reader eui :print-formatter fmt-eui)
270 (bas :value-type string :initarg :bas :reader bas)
271 (abr :value-type string :initarg :abr :reader abr)
272 (eui2 :value-type integer :initarg :eui2 :reader eui2 :print-formatter fmt-eui)
273 (bas2 :value-type string :initarg :bas2 :reader bas2))
274 (:metaclass hyperobject-class)
275 (:user-name "Abbreviations and Acronyms")
276 (:default-print-slots eui bas abr eui2 bas2))
278 (defclass lagr (umlsclass)
279 ((eui :value-type integer :initarg :eui :reader eui :print-formatter fmt-eui)
280 (str :value-type string :initarg :str :reader str)
281 (sca :value-type string :initarg :sca :reader sca)
282 (agr :value-type string :initarg :agr :reader agr)
283 (cit :value-type string :initarg :cit :reader cit)
284 (bas :value-type string :initarg :bas :reader bas))
285 (:metaclass hyperobject-class)
286 (:user-name "Agreement and Inflection")
287 (:default-print-slots eui str sca agr cit bas))
289 (defclass lcmp (umlsclass)
290 ((eui :value-type integer :initarg :eui :reader eui :print-formatter fmt-eui)
291 (bas :value-type string :initarg :bas :reader bas)
292 (sca :value-type string :initarg :sca :reader sca)
293 (com :value-type string :initarg :com :reader com))
294 (:metaclass hyperobject-class)
295 (:user-name "Complementation")
296 (:default-print-slots eui bas sca com))
298 (defclass lmod (umlsclass)
299 ((eui :value-type integer :initarg :eui :reader eui :print-formatter fmt-eui)
300 (bas :value-type string :initarg :bas :reader bas)
301 (sca :value-type string :initarg :sca :reader sca)
302 (psnmod :value-type string :initarg :psnmod :reader psnmod)
303 (fea :value-type string :initarg :fea :reader fea))
304 (:metaclass hyperobject-class)
305 (:user-name "Modifiers")
306 (:default-print-slots eui bas sca psnmod fea))
308 (defclass lnom (umlsclass)
309 ((eui :value-type integer :initarg :eui :reader eui :print-formatter fmt-eui)
310 (bas :value-type string :initarg :bas :reader bas)
311 (sca :value-type string :initarg :sca :reader sca)
312 (eui2 :value-type integer :initarg :eui2 :reader eui2 :print-formatter fmt-eui)
313 (bas2 :value-type string :initarg :bas2 :reader bas2)
314 (sca2 :value-type string :initarg :sca2 :reader sca2))
315 (:metaclass hyperobject-class)
316 (:user-name "Nominalizations")
317 (:default-print-slots eui bas sca eui2 bas2 sca2))
319 (defclass lprn (umlsclass)
320 ((eui :value-type integer :initarg :eui :reader eui :print-formatter fmt-eui)
321 (bas :value-type string :initarg :bas :reader bas)
322 (num :value-type string :initarg :num :reader num)
323 (gnd :value-type string :initarg :gnd :reader gnd)
324 (cas :value-type string :initarg :cas :reader cas)
325 (pos :value-type string :initarg :pos :reader pos)
326 (qnt :value-type string :initarg :qnt :reader qnt)
327 (fea :value-type string :initarg :fea :reader fea))
328 (:metaclass hyperobject-class)
329 (:user-name "Pronouns")
330 (:default-print-slots eui bas num gnd cas pos qnt fea))
332 (defclass lprp (umlsclass)
333 ((eui :value-type integer :initarg :eui :reader eui :print-formatter fmt-eui)
334 (bas :value-type string :initarg :bas :reader bas)
335 (str :value-type string :initarg :str :reader str)
336 (sca :value-type string :initarg :sca :reader sca)
337 (fea :value-type string :initarg :fea :reader fea))
338 (:metaclass hyperobject-class)
339 (:user-name "Properties")
340 (:default-print-slots eui bas str sca fea))
343 (defclass lspl (umlsclass)
344 ((eui :value-type integer :initarg :eui :reader eui :print-formatter fmt-eui)
345 (spv :value-type string :initarg :spv :reader spv)
346 (bas :value-type string :initarg :bas :reader bas))
347 (:metaclass hyperobject-class)
348 (:user-name "Spelling Variants")
349 (:default-print-slots eui spv bas))
352 (defclass ltrm (umlsclass)
353 ((eui :value-type integer :initarg :eui :reader eui :print-formatter fmt-eui)
354 (bas :value-type string :initarg :bas :reader bas)
355 (gen :value-type string :initarg :gen :reader gen))
356 (:metaclass hyperobject-class)
357 (:user-name "Trade Marks")
358 (:default-print-slots eui bas gen))
360 (defclass ltyp (umlsclass)
361 ((eui :value-type integer :initarg :eui :reader eui :print-formatter fmt-eui)
362 (bas :value-type string :initarg :bas :reader bas)
363 (sca :value-type string :initarg :sca :reader sca)
364 (typ :value-type string :initarg :typ :reader typ))
365 (:metaclass hyperobject-class)
366 (:user-name "Inflection Type")
367 (:default-print-slots eui bas sca typ))
369 (defclass lwd (umlsclass)
370 ((wrd :value-type string :initarg :wrd :reader wrd)
371 (euilist :value-type list :initarg :euilist :reader euilist))
372 (:metaclass hyperobject-class)
373 (:user-name "Lexical Word Index")
374 (:default-print-slots wrd euilist))
376 ;;; Semantic NET objects
378 (defclass sdef (umlsclass)
379 ((rt :value-type string :initarg :rt :reader rt)
380 (ui :value-type integer :initarg :ui :reader ui :print-formatter fmt-tui)
381 (styrl :value-type string :initarg :styrl :reader styrl)
382 (stnrtn :value-type string :initarg :stnrtn :reader stnrtn)
383 (def :value-type string :initarg :def :reader def)
384 (ex :value-type string :initarg :ex :reader ex)
385 (un :value-type string :initarg :un :reader un)
386 (rh :value-type string :initarg :rh :reader rh)
387 (abr :value-type string :initarg :abr :reader abr)
388 (rin :value-type string :initarg :rin :reader rin))
389 (:metaclass hyperobject-class)
390 (:user-name "Basic information about Semantic Types and Relations")
391 (:default-print-slots rt ui styrl stnrtn def ex un rh abr rin))
393 (defclass sstr (umlsclass)
394 ((styrl :value-type string :initarg :styrl :reader styrl)
395 (rl :value-type string :initarg :rl :reader rl)
396 (styrl2 :value-type string :initarg :styrl2 :reader styrl2)
397 (ls :value-type string :initarg :ls :reader ls))
398 (:metaclass hyperobject-class)
399 (:user-name "Structure of the Network")
400 (:default-print-slots styrl rl styrl2 ls))
402 (defclass sstre1 (umlsclass)
403 ((ui :value-type integer :initarg :ui :reader ui :print-formatter fmt-tui)
404 (ui2 :value-type integer :initarg :ui2 :reader ui2 :print-formatter fmt-tui)
405 (ui3 :value-type integer :initarg :ui3 :reader ui3 :print-formatter fmt-tui))
406 (:metaclass hyperobject-class)
407 (:user-name "Fully Inherited Set of Releatons (TUI's)")
408 (:default-print-slots ui ui2 ui3))
410 (defclass sstre2 (umlsclass)
411 ((sty :value-type string :initarg :ui :reader sty)
412 (rl :value-type string :initarg :ui2 :reader rl)
413 (sty2 :value-type string :initarg :ui3 :reader sty2))
414 (:metaclass hyperobject-class)
415 (:user-name "Fully Inherited Set of Releatons (strings)")
416 (:default-print-slots sty rl sty2))