r549: no message

[ctsim.git] / doc / ctsim.tex

diff --git a/doc/ctsim.tex b/doc/ctsim.tex
index 5a5f7c75d8dd0f9c8a1ca108d08a5e86d2c5a8d9..0b656acbded42db63937e409b77589e1c0e7b750 100644 (file)
--- a/doc/ctsim.tex
+++ b/doc/ctsim.tex
@@ -1,8 +1,8 @@
-\documentclass[letter,12pt]{report}%
+\documentclass[letterpaper,11pt]{report}%

 \usepackage{graphicx}
 \usepackage{texhelp}
 \usepackage{fancyhea}
 \usepackage{graphicx}
 \usepackage{texhelp}
 \usepackage{fancyhea}

-%\usepackage{mysober}
+\usepackage{mysober}

 \usepackage{mytitle}
 \usepackage{verbatim}
 \usepackage{makeidx}
 \usepackage{mytitle}
 \usepackage{verbatim}
 \usepackage{makeidx}


@@ -23,10 +23,14 @@
 \newcommand{\indexit}[1]{#1\index{#1}}%
 \newcommand{\inioption}[1]{{\bf {\tt #1}}\index{#1}}%
 
 \newcommand{\indexit}[1]{#1\index{#1}}%
 \newcommand{\inioption}[1]{{\bf {\tt #1}}\index{#1}}%
 

-\newcommand{\manvernum}[0]{0.21}
+\newcommand{\manvernum}[0]{0.6}

 \newcommand{\manver}[0]{v\manvernum}
 \newcommand{\manver}[0]{v\manvernum}

-\newcommand{\mandate}[0]{February 12, 2001}
+\newcommand{\mandate}[0]{February 16, 2001}

 \newcommand{\ctsimfooter}{\setfooter{\thepage}{}{}{\small Manual \manver}{\small \mandate}{\thepage}}
 \newcommand{\ctsimfooter}{\setfooter{\thepage}{}{}{\small Manual \manver}{\small \mandate}{\thepage}}

+\newcommand{\doublehyphen}[1]{-\,-\texttt{#1}}
+\newcommand{\ctsimvernum}[0]{3.0.0}
+\newcommand{\ctsimver}[0]{CTSim \ctsimvernum}
+\newcommand{\ctsimheadtitle}{\ctsimver\ Manual}

 
 \latexignore{\newcommand{\sqrt}[2]{sqrt(#2)}}
 
 
 \latexignore{\newcommand{\sqrt}[2]{sqrt(#2)}}
 


@@ -35,23 +39,21 @@
 %\backgroundcolour{255;255;255}\textcolour{0;0;0}% Has an effect in HTML only
 \title{CTSim 3.0 User Manual}%
 \author{Kevin Rosenberg, M.D.}%
 %\backgroundcolour{255;255;255}\textcolour{0;0;0}% Has an effect in HTML only
 \title{CTSim 3.0 User Manual}%
 \author{Kevin Rosenberg, M.D.}%

-\date{February 9, 2001}%

 \makeindex%
 
 \makeindex%
 

-\begin{document}%
-\maketitle%
-\pagestyle{fancyplain}%
-\pagenumbering{roman}%
+\begin{document}
+\textheight=9in
+\textwidth=6.5in
+\evensidemargin=0in
+\oddsidemargin=0in

 
 

-\setheader{{\it CONTENTS}}{}{}{}{}{{\it CONTENTS}}%
-\ctsimfooter
-\parskip=2pt
-\tableofcontents%
+\maketitle
+\pagestyle{fancyplain}
+\pagenumbering{roman}

 
 

-\parskip=10pt

 \chapter*{Copyright notice}%
 \chapter*{Copyright notice}%

-\setheader{{\it COPYRIGHT}}{}{}{}{}{{\it COPYRIGHT}}%
-\setfooter{\thepage}{}{}{}{\manver}{\thepage}%
+\setheader{{\it COPYRIGHT}}{}{}{\ctsimheadtitle}{}{{\it COPYRIGHT}}%
+\ctsimfooter

 
 Copyright (c) 1983-2001 Kevin Rosenberg, M.D.
 
 
 Copyright (c) 1983-2001 Kevin Rosenberg, M.D.
 


@@ -71,41 +73,54 @@ WHETHER OR NOT ADVISED OF THE POSSIBILITY OF DAMAGE, AND ON ANY THEORY
 OF LIABILITY, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
 PERFORMANCE OF THIS SOFTWARE.
 
 OF LIABILITY, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
 PERFORMANCE OF THIS SOFTWARE.
 

-\chapter{Introduction}\label{introduction}
+
+\chapter*{Acknowledgements}
+\setheader{{\it COPYRIGHT}}{}{}{\ctsimheadtitle}{}{{\it COPYRIGHT}}%
+\setfooter{\thepage}{}{}{}{\manver}{\thepage}%
+
+\textbf{Ian Kay, Ph.D.}\\
+Special thanks to Dr. Kay for contributing portions to this manual. Dr. Kay has assisted the
+development of \ctsim\ with bug reports and fixes.
+
+\textbf{Gabor T. Herman, Ph.D.}\\
+Dr. Herman's publications on computed tomography inspired me to
+create the initial version \ctsim\ in 1983. Dr. Herman
+has graciously permitted use of his
+copyrighted head phantom for use in \ctsim.
+
+
+\setheader{{\it CONTENTS}}{}{}{\ctsimheadtitle}{}{{\it CONTENTS}}%
+\ctsimfooter
+\parskip=2pt
+\tableofcontents%
+
+\parskip=10pt
+\chapter{Introduction}\label{IDH_INTRODUCTION}

 \pagenumbering{arabic}
 \pagenumbering{arabic}

-\setheader{{\it CHAPTER \thechapter}}{}{}{}{}{{\it CHAPTER \thechapter}}%
+\setheader{{\it CHAPTER \thechapter}}{}{}{\ctsimheadtitle}{}{{\it CHAPTER \thechapter}}%

 \ctsimfooter
 
 
 \centerline{\image{3cm;3cm}{logo-huge.eps}}
 \ctsimfooter
 
 
 \centerline{\image{3cm;3cm}{logo-huge.eps}}

-Computed Tomography is a technique for estimating the interior of an
-object from
-measurement of radiation collected around the object. This
+Computed tomography is a technique for estimating the interior of an
+object from measurements of radiation collected around the object. This

 radiation can be either projected through or emitted from the
 object. \ctsim\ simulates the process of projecting X-rays
 through a phantom object. \ctsim\ can then reconstruct the
 radiation can be either projected through or emitted from the
 object. \ctsim\ simulates the process of projecting X-rays
 through a phantom object. \ctsim\ can then reconstruct the

-interior of the object from the projections collected around the
-phantom object.
+interior of the object from those projections. \ctsim\ integrates
+numerous visualization and analytic tools.

 
 This manual begins with an introduction into the concepts of
 
 This manual begins with an introduction into the concepts of

-\ctsim. The graphical, \helprefn{ctsim}{ctsim}, and
-command-line, \helprefn{ctsimtext}{ctsimtext}, shells are then
-presented. Finally, the web-based
-\helprefn{interface}{webinterface} and
-\helprefn{installation}{installation} are discussed.
+\ctsim. Next, the graphical, command-line, and web shells are
+presented. Finally, the installation of \ctsim\ is discussed.

 
 I hope that you enjoy \ctsim!
 
 \include{ctsim-concepts}
 
 I hope that you enjoy \ctsim!
 
 \include{ctsim-concepts}

-

 \include{ctsim-gui}
 \include{ctsim-gui}

-

 \include{ctsim-textui}
 \include{ctsim-textui}

-

 \include{ctsim-web}
 \include{ctsim-web}

-

 \include{ctsim-install}
 \include{ctsim-install}

-

 \include{ctsim-appendix}
 
 \newpage
 \include{ctsim-appendix}
 
 \newpage


@@ -113,12 +128,13 @@ I hope that you enjoy \ctsim!
 \bibliographystyle{plain}
 \bibliography{ctsim}
 \addcontentsline{toc}{chapter}{Bibliography}
 \bibliographystyle{plain}
 \bibliography{ctsim}
 \addcontentsline{toc}{chapter}{Bibliography}

-\setheader{{\it REFERENCES}}{}{}{}{}{{\it REFERENCES}}%
-\ctsimfooter%
+\setheader{{\it REFERENCES}}{}{}{\ctsimheadtitle}{}{{\it REFERENCES}}
+\ctsimfooter

 
 

+\newpage

 \addcontentsline{toc}{chapter}{Index}
 \addcontentsline{toc}{chapter}{Index}

-\setheader{{\it INDEX}}{}{}{}{}{{\it INDEX}} %
-\ctsimfooter %
-\printindex %
+\setheader{{\it INDEX}}{}{}{\ctsimheadtitle}{}{{\it INDEX}} %
+\ctsimfooter
+\printindex

 
 \end{document}
 
 \end{document}