r541: no message

[ctsim.git] / doc / ctsim.tex

diff --git a/doc/ctsim.tex b/doc/ctsim.tex
index 6b42f8d311535b2e0ee71be973c78f200bfe347e..4985efc4f8751b6cac6a3ce1e0164119b7c23cc3 100644 (file)
--- a/doc/ctsim.tex
+++ b/doc/ctsim.tex
@@ -1,47 +1,68 @@
-\documentclass[11pt]{report}%
-%\input{psbox.tex}
+\documentclass[letterpaper,12pt]{report}%
+\usepackage{graphicx}

 \usepackage{texhelp}
 \usepackage{texhelp}

-\usepackage{fancyheadings}
+\usepackage{fancyhea}

 \usepackage{mysober}
 \usepackage{mytitle}
 \usepackage{verbatim}
 \usepackage{makeidx}
 \usepackage{mysober}
 \usepackage{mytitle}
 \usepackage{verbatim}
 \usepackage{makeidx}

-\usepackage{times}
+%\usepackage{times}

 \usepackage{hyperref}
 \usepackage{hyperref}

+\input{psbox.tex}

 
 

-\newcommand{\ctsim}{{\tt CTSim}}
-\newcommand{\ctsimtext}{{\tt CTSimText}}
-\newcommand{\usage}{{\bf Usage}{\par}}
+\setlength{\textheight}{9in}
+\setlength{\textwidth}{6.5in}
+\setlength{\topmargin}{-0.25in}
+\setlength{\evensidemargin}{0in}
+\setlength{\oddsidemargin}{0in}
+
+
+\latexonly{\includeonly{ctsim-concepts,ctsim-install,ctsim-gui,ctsim-textui,ctsim-web,ctsim-appendix}}
+\hyphenation{poly-gon-al}
+
+\newcommand{\ctsim}{\texttt{CTSim}}
+\newcommand{\ctsimtext}{\texttt{CTSimText}}
+\newcommand{\usage}{\textbf{Usage}\par}

 
 \newcommand{\commandref}[2]{\helpref{{\tt $\backslash$#1}}{#2}}%
 \newcommand{\commandrefn}[2]{\helprefn{{\tt $\backslash$#1}}{#2}\index{#1}}%
 
 \newcommand{\commandref}[2]{\helpref{{\tt $\backslash$#1}}{#2}}%
 \newcommand{\commandrefn}[2]{\helprefn{{\tt $\backslash$#1}}{#2}\index{#1}}%

-\newcommand{\commandpageref}[2]{\latexignore{\helprefn{{\tt $\backslash$#1}}{#2}}\latexonly{{\tt $\backslash$#1} {\it page \pageref{#2}}}\index{#1}}%
+\newcommand{\commandpageref}[2]{\latexignore{\helprefn{{\tt $\backslash$#1}}{#2}}\latexonly{{\tt $\backslash$#1} {\it page \pageref{#2}}}\index{#1}}

 \newcommand{\indexit}[1]{#1\index{#1}}%
 \newcommand{\inioption}[1]{{\bf {\tt #1}}\index{#1}}%
 \newcommand{\indexit}[1]{#1\index{#1}}%
 \newcommand{\inioption}[1]{{\bf {\tt #1}}\index{#1}}%

+
+\newcommand{\manvernum}[0]{0.4}
+\newcommand{\manver}[0]{v\manvernum}
+\newcommand{\mandate}[0]{February 14, 2001}
+\newcommand{\ctsimfooter}{\setfooter{\thepage}{}{}{\small Manual \manver}{\small \mandate}{\thepage}}
+\newcommand{\doublehyphen}[1]{-\,-\texttt{#1}}
+\newcommand{\ctsimvernum}[0]{3.0.0beta2}
+\newcommand{\ctsimver}[0]{CTSim \ctsimvernum}
+\newcommand{\ctsimheadtitle}{\ctsimver Manual}
+
+\latexignore{\newcommand{\sqrt}[2]{sqrt(#2)}}
+

 \parskip=10pt%
 \parindent=0pt%
 %\backgroundcolour{255;255;255}\textcolour{0;0;0}% Has an effect in HTML only
 \parskip=10pt%
 \parindent=0pt%
 %\backgroundcolour{255;255;255}\textcolour{0;0;0}% Has an effect in HTML only

-\winhelpignore{\title{Manual for CTSim 3.0}%
+\title{CTSim 3.0 User Manual}%

 \author{Kevin Rosenberg, M.D.}%
 \author{Kevin Rosenberg, M.D.}%

-\date{January 2001}%
-}%
-\winhelponly{\title{Manual for CTSim 3.0}%
-\author{by Kevin Rosenberg, M.D.\\$$\image{3cm;3cm}{logo-huge.bmp}$$}%
-}%
+\date{February 9, 2001}%

 \makeindex%
 \makeindex%

+

 \begin{document}%
 \maketitle%
 \pagestyle{fancyplain}%
 \begin{document}%
 \maketitle%
 \pagestyle{fancyplain}%

-\bibliographystyle{plain}%

 \pagenumbering{roman}%
 
 \pagenumbering{roman}%
 

-\setheader{{\it CONTENTS}}{}{}{}{}{{\it CONTENTS}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
+\setheader{{\it CONTENTS}}{}{}{\ctsimheadtitle}{}{{\it CONTENTS}}%
+\ctsimfooter
+\parskip=2pt

 \tableofcontents%
 
 \tableofcontents%
 

+\parskip=10pt

 \chapter*{Copyright notice}%
 \chapter*{Copyright notice}%

-\setheader{{\it COPYRIGHT}}{}{}{}{}{{\it COPYRIGHT}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
+\setheader{{\it COPYRIGHT}}{}{}{\ctsimheadtitle}{}{{\it COPYRIGHT}}%
+\setfooter{\thepage}{}{}{}{\manver}{\thepage}%

 
 Copyright (c) 1983-2001 Kevin Rosenberg, M.D.
 
 
 Copyright (c) 1983-2001 Kevin Rosenberg, M.D.
 


@@ -61,25 +82,28 @@ WHETHER OR NOT ADVISED OF THE POSSIBILITY OF DAMAGE, AND ON ANY THEORY
 OF LIABILITY, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
 PERFORMANCE OF THIS SOFTWARE.
 
 OF LIABILITY, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
 PERFORMANCE OF THIS SOFTWARE.
 

-\chapter{Introduction}\label{introduction}%
-\pagenumbering{arabic}%
-\setheader{{\it CHAPTER \thechapter}}{}{}{}{}{{\it CHAPTER \thechapter}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
+\chapter{Introduction}\label{introduction}
+\pagenumbering{arabic}
+\setheader{{\it CHAPTER \thechapter}}{}{}{\ctsimheadtitle}{}{{\it CHAPTER \thechapter}}%
+\ctsimfooter

 
 

-\winhelponly{$$\image{3cm;3cm}{logo-huge}$$}%
-\htmlonly{$$\image{3cm;3cm}{logo-huge.gif}$$}%
-Computed Tomography is a technique for estimating the interior of an object 
-from measurement of radiation collected around the object. This radiation 
-can be either projected through or emitted from the object.
-\rtfsp\ctsim simulates the process of projecting X-rays through a phantom object.
-\rtfsp\ctsim can then reconstruct the interior of the object from the projections
-collected around the phantom object.

 
 

-The \ctsim package has two executable files: the graphical \helprefn{ctsim}{ctsim} and text \helprefn{ctsimtext}{ctsimtext} programs.
+\centerline{\image{3cm;3cm}{logo-huge.eps}}
+Computed Tomography is a technique for estimating the interior of an
+object from measurement of radiation collected around the object. This
+radiation can be either projected through or emitted from the
+object. \ctsim\ simulates the process of projecting X-rays
+through a phantom object. \ctsim\ can then reconstruct the
+interior of the object from those projections. \ctsim\ integrates
+numerous visualization and analytic tools.

 
 

-\include{ctsim-concepts}
+This manual begins with an introduction into the concepts of
+\ctsim. Next, the graphical, command-line, and web shells are
+presented. Finally, the installation of \ctsim is discussed.

 
 

-\include{ctsim-install}
+I hope that you enjoy \ctsim!
+
+\include{ctsim-concepts}

 
 \include{ctsim-gui}
 
 
 \include{ctsim-gui}
 


@@ -87,18 +111,21 @@ The \ctsim package has two executable files: the graphical \helprefn{ctsim}{ctsi
 
 \include{ctsim-web}
 
 
 \include{ctsim-web}
 

+\include{ctsim-install}
+
+\include{ctsim-appendix}
+

 \newpage
 
 \bibliographystyle{plain}
 \bibliography{ctsim}
 \addcontentsline{toc}{chapter}{Bibliography}
 \newpage
 
 \bibliographystyle{plain}
 \bibliography{ctsim}
 \addcontentsline{toc}{chapter}{Bibliography}

-\setheader{{\it REFERENCES}}{}{}{}{}{{\it REFERENCES}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
+\setheader{{\it REFERENCES}}{}{}{\ctsimheadtitle}{}{{\it REFERENCES}}
+\ctsimfooter

 
 \addcontentsline{toc}{chapter}{Index}
 
 \addcontentsline{toc}{chapter}{Index}

-\setheader{{\it INDEX}}{}{}{}{}{{\it INDEX}} %
-\setfooter{\thepage}{}{}{}{}{\thepage} %
-\printindex %
+\setheader{{\it INDEX}}{}{}{\ctsimheadtitle}{}{{\it INDEX}} %
+\ctsimfooter
+\printindex

 
 

-\end{document}%
- 
+\end{document}