\usepackage{fancyhea}
%\usepackage{mysober}
\usepackage{mytitle}
-%\usepackage{verbatim}
+\usepackage{verbatim}
\usepackage{makeidx}
%\usepackage{times}
\usepackage{hyperref}
\input{psbox.tex}
+\latexonly{\includeonly{ctsim-concepts,ctsim-install,ctsim-gui,ctsim-textui,ctsim-web,ctsim-appendix}}
+\hyphenation{poly-gon-al}
+
\newcommand{\ctsim}{\texttt{CTSim}}
\newcommand{\ctsimtext}{\texttt{CTSimText}}
\newcommand{\usage}{\textbf{Usage}\par}
\newcommand{\commandref}[2]{\helpref{{\tt $\backslash$#1}}{#2}}%
\newcommand{\commandrefn}[2]{\helprefn{{\tt $\backslash$#1}}{#2}\index{#1}}%
-\newcommand{\commandpageref}[2]{\latexignore{\helprefn{{\tt $\backslash$#1}}{#2}}\latexonly{{\tt $\backslash$#1} {\it page \pageref{#2}}}\index{#1}}%
+\newcommand{\commandpageref}[2]{\latexignore{\helprefn{{\tt $\backslash$#1}}{#2}}\latexonly{{\tt $\backslash$#1} {\it page \pageref{#2}}}\index{#1}}
\newcommand{\indexit}[1]{#1\index{#1}}%
\newcommand{\inioption}[1]{{\bf {\tt #1}}\index{#1}}%
+
+\newcommand{\manver}[0]{\small Manual v0.21}
+\latexignore{\newcommand{\sqrt}[2]{sqrt(#2)}}%
+
\parskip=10pt%
\parindent=0pt%
%\backgroundcolour{255;255;255}\textcolour{0;0;0}% Has an effect in HTML only
-\winhelpignore{\title{Manual for CTSim 3.0}%
+\title{CTSim 3.0 User Manual}%
\author{Kevin Rosenberg, M.D.}%
-\date{January 2001}%
-}%
-\winhelponly{\title{Manual for CTSim 3.0}%
-\author{by Kevin Rosenberg, M.D.\\$$\image{3cm;3cm}{logo-huge.bmp}$$}%
-}%
+\date{February 9, 2001}%
\makeindex%
+
\begin{document}%
\maketitle%
\pagestyle{fancyplain}%
\pagenumbering{roman}%
\setheader{{\it CONTENTS}}{}{}{}{}{{\it CONTENTS}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
+\setfooter{\thepage}{}{}{}{\manver}{\thepage}%
+\parskip=2pt
\tableofcontents%
+\parskip=10pt
\chapter*{Copyright notice}%
\setheader{{\it COPYRIGHT}}{}{}{}{}{{\it COPYRIGHT}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
+\setfooter{\thepage}{}{}{}{\manver}{\thepage}%
Copyright (c) 1983-2001 Kevin Rosenberg, M.D.
\chapter{Introduction}\label{introduction}%
\pagenumbering{arabic}%
\setheader{{\it CHAPTER \thechapter}}{}{}{}{}{{\it CHAPTER \thechapter}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
-
-\image{3cm;3cm}{logo-huge.eps}
-Computed Tomography is a technique for estimating the interior of an object
-from measurement of radiation collected around the object. This radiation
-can be either projected through or emitted from the object.
-\rtfsp\ctsim\ simulates the process of projecting X-rays through a phantom object.
-\rtfsp\ctsim\ can then reconstruct the interior of the object from the projections
-collected around the phantom object.
-
-The \ctsim\ package has two executable files: the graphical
-\helprefn{ctsim}{ctsim} and text \helprefn{ctsimtext}{ctsimtext} programs.
+\setfooter{\thepage}{}{}{}{\small Manual v0.2}{\thepage}%
+
+\centerline{\image{3cm;3cm}{logo-huge.eps}}
+Computed Tomography is
+a technique for estimating the interior of an object from
+measurement of radiation collected around the object. This
+radiation can be either projected through or emitted from the
+object. \rtfsp\ctsim\ simulates the process of projecting X-rays
+through a phantom object. \rtfsp\ctsim\ can then reconstruct the
+interior of the object from the projections collected around the
+phantom object.
+
+This manual begins with an introduction into the concepts of
+\rtfsp\ctsim. Then, the graphical shell, \helprefn{ctsim}{ctsim},
+is documented followed the the command-line shell,
+\helprefn{ctsimtext}{ctsimtext}. Finally, the web-based
+\helprefn{interface}{webinterface} is discussed followed by
+\helprefn{installation}{installation} instructions.
+
+I hope that you enjoy \ctsim!
\include{ctsim-concepts}
-\include{ctsim-install}
-
\include{ctsim-gui}
\include{ctsim-textui}
\include{ctsim-web}
+\include{ctsim-install}
+
\include{ctsim-appendix}
\newpage
\bibliography{ctsim}
\addcontentsline{toc}{chapter}{Bibliography}
\setheader{{\it REFERENCES}}{}{}{}{}{{\it REFERENCES}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
+\setfooter{\thepage}{}{}{}{\manver}{\thepage}%
\addcontentsline{toc}{chapter}{Index}
\setheader{{\it INDEX}}{}{}{}{}{{\it INDEX}} %
-\setfooter{\thepage}{}{}{}{}{\thepage} %
+\setfooter{\thepage}{}{}{}{\manver}{\thepage} %
\printindex %
-\end{document}%
+\end{document}