\usepackage{graphicx}
\usepackage{texhelp}
\usepackage{fancyhea}
-\usepackage{mysober}
+%\usepackage{mysober}
\usepackage{mytitle}
\usepackage{verbatim}
\usepackage{makeidx}
-\usepackage{times}
+%\usepackage{times}
\usepackage{hyperref}
\input{psbox.tex}
+\latexonly{\includeonly{ctsim-concepts,ctsim-install,ctsim-gui,ctsim-textui,ctsim-web,ctsim-appendix}}
+\hyphenation{poly-gon-al}
+
\newcommand{\ctsim}{\texttt{CTSim}}
\newcommand{\ctsimtext}{\texttt{CTSimText}}
\newcommand{\usage}{\textbf{Usage}\par}
\newcommand{\commandref}[2]{\helpref{{\tt $\backslash$#1}}{#2}}%
\newcommand{\commandrefn}[2]{\helprefn{{\tt $\backslash$#1}}{#2}\index{#1}}%
-\newcommand{\commandpageref}[2]{\latexignore{\helprefn{{\tt $\backslash$#1}}{#2}}\latexonly{{\tt $\backslash$#1} {\it page \pageref{#2}}}\index{#1}}%
+\newcommand{\commandpageref}[2]{\latexignore{\helprefn{{\tt $\backslash$#1}}{#2}}\latexonly{{\tt $\backslash$#1} {\it page \pageref{#2}}}\index{#1}}
\newcommand{\indexit}[1]{#1\index{#1}}%
\newcommand{\inioption}[1]{{\bf {\tt #1}}\index{#1}}%
+
+\newcommand{\manver}[0]{\small Manual v0.21}
+\latexignore{\newcommand{\sqrt}[2]{sqrt(#2)}}%
+
\parskip=10pt%
\parindent=0pt%
%\backgroundcolour{255;255;255}\textcolour{0;0;0}% Has an effect in HTML only
-\winhelpignore{\title{Manual for CTSim 3.0}%
+\title{CTSim 3.0 User Manual}%
\author{Kevin Rosenberg, M.D.}%
-\date{January 2001}%
-}%
-\winhelponly{\title{Manual for CTSim 3.0}%
-\author{by Kevin Rosenberg, M.D.\\$$\image{3cm;3cm}{logo-huge.bmp}$$}%
-}%
+\date{February 9, 2001}%
\makeindex%
+
\begin{document}%
\maketitle%
\pagestyle{fancyplain}%
-\bibliographystyle{plain}%
\pagenumbering{roman}%
\setheader{{\it CONTENTS}}{}{}{}{}{{\it CONTENTS}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
+\setfooter{\thepage}{}{}{}{\manver}{\thepage}%
+\parskip=2pt
\tableofcontents%
+\parskip=10pt
\chapter*{Copyright notice}%
\setheader{{\it COPYRIGHT}}{}{}{}{}{{\it COPYRIGHT}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
+\setfooter{\thepage}{}{}{}{\manver}{\thepage}%
Copyright (c) 1983-2001 Kevin Rosenberg, M.D.
-Specified file
-
Permission to use, copy, modify, and distribute this software and its
documentation for any purpose is hereby granted without fee, provided that the
above copyright notice, author statement and this permission notice appear in
\chapter{Introduction}\label{introduction}%
\pagenumbering{arabic}%
\setheader{{\it CHAPTER \thechapter}}{}{}{}{}{{\it CHAPTER \thechapter}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
-
-\image{3cm;3cm}{logo-huge.eps}
-Computed Tomography is a technique for estimating the interior of an object
-from measurement of radiation collected around the object. This radiation
-can be either projected through or emitted from the object.
-\rtfsp\ctsim\ simulates the process of projecting X-rays through a phantom object.
-\rtfsp\ctsim\ can then reconstruct the interior of the object from the projections
-collected around the phantom object.
-
-The \ctsim\ package has two executable files: the graphical \helprefn{ctsim}{ctsim} and text \helprefn{ctsimtext}{ctsimtext} programs.
+\setfooter{\thepage}{}{}{}{\small Manual v0.2}{\thepage}%
+
+\centerline{\image{3cm;3cm}{logo-huge.eps}}
+Computed Tomography is
+a technique for estimating the interior of an object from
+measurement of radiation collected around the object. This
+radiation can be either projected through or emitted from the
+object. \rtfsp\ctsim\ simulates the process of projecting X-rays
+through a phantom object. \rtfsp\ctsim\ can then reconstruct the
+interior of the object from the projections collected around the
+phantom object.
+
+This manual begins with an introduction into the concepts of
+\rtfsp\ctsim. Then, the graphical shell, \helprefn{ctsim}{ctsim},
+is documented followed the the command-line shell,
+\helprefn{ctsimtext}{ctsimtext}. Finally, the web-based
+\helprefn{interface}{webinterface} is discussed followed by
+\helprefn{installation}{installation} instructions.
+
+I hope that you enjoy \ctsim!
\include{ctsim-concepts}
-\include{ctsim-install}
-
\include{ctsim-gui}
\include{ctsim-textui}
\include{ctsim-web}
+\include{ctsim-install}
+
\include{ctsim-appendix}
\newpage
\bibliography{ctsim}
\addcontentsline{toc}{chapter}{Bibliography}
\setheader{{\it REFERENCES}}{}{}{}{}{{\it REFERENCES}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
+\setfooter{\thepage}{}{}{}{\manver}{\thepage}%
\addcontentsline{toc}{chapter}{Index}
\setheader{{\it INDEX}}{}{}{}{}{{\it INDEX}} %
-\setfooter{\thepage}{}{}{}{}{\thepage} %
+\setfooter{\thepage}{}{}{}{\manver}{\thepage} %
\printindex %
-\end{document}%
+\end{document}