;;;;
;;;; Name: sql-classes.lisp
;;;; Purpose: Routines for reading UMLS objects from SQL database
-;;;; Programmer: Kevin M. Rosenberg
+;;;; Author: Kevin M. Rosenberg
;;;; Date Started: Apr 2000
;;;;
-;;;; $Id: sql-classes.lisp,v 1.13 2002/12/13 07:34:20 kevin Exp $
+;;;; $Id: sql-classes.lisp,v 1.75 2003/05/07 22:53:36 kevin Exp $
;;;;
;;;; This file, part of UMLisp, is
;;;; Copyright (c) 2000-2002 by Kevin M. Rosenberg, M.D.
;;;; *************************************************************************
(in-package :umlisp)
-(declaim (optimize (speed 3) (safety 1) (compilation-speed 0) (debug 3)))
+(declaim (optimize (compilation-speed 0) (debug 3)))
(defvar *current-srl* nil)
(defun current-srl! (srl)
(setq *current-srl* srl))
-;;; Object lookups
-
-;;; Lookup functions for uterms,ustr in ucons
-
-(defun find-uterm-in-ucon (ucon lui)
- (find lui (s#term ucon) :key #'lui :test 'equal))
-
-(defun find-ustr-in-uterm (uterm sui)
- (find sui (s#str uterm) :key #'sui :test 'equal))
-
-(defun find-ustr-in-ucon (ucon sui)
- (let ((found-ustr nil))
- (dolist (uterm (s#term ucon))
- (unless found-ustr
- (dolist (ustr (s#str uterm))
- (unless found-ustr
- (when (string-equal sui (sui ustr))
- (setq found-ustr ustr))))))
- found-ustr))
-
+(defmacro query-string (table fields &optional srl where-name where-value
+ &key (lrl "KCUILRL") single distinct order like)
+ (let* ((%%fields (format nil "select ~A~{~:@(~A~)~^,~} from ~:@(~A~)"
+ (if distinct "distinct " "") fields table))
+ (%%order (if order (format nil " order by ~{~:@(~A~) ~(~A~)~^,~}"
+ order)
+ ""))
+ (%%lrl (format nil " and ~:@(~A~)<=" lrl))
+ (%%where (when where-name
+ (format nil " where ~:@(~A~)~A" where-name
+ (if like " like " "")))))
+ `(concatenate
+ 'string
+ ,%%fields
+ ,@(when %%where (list %%where))
+ ,@(when %%where
+ `((typecase ,where-value
+ (number
+ (concatenate 'string "=" (write-to-string ,where-value)))
+ (null
+ " is null")
+ (t
+ (format nil ,(if like "'%~A%'" "='~A'") ,where-value)))))
+ (if ,srl (concatenate 'string ,%%lrl (write-to-string ,srl)) "")
+ ,@(when %%order (list %%order))
+ ,@(when single (list " limit 1")))))
+
+(defun query-string-eval (table fields &optional srl where-name where-value
+ &key (lrl "KCUILRL") single distinct order like)
+ (concatenate
+ 'string
+ (format nil "select ~A~{~:@(~A~)~^,~} from ~:@(~A~)"
+ (if distinct "distinct " "") fields table)
+ (if where-name (format nil " where ~:@(~A~)" where-name) "")
+ (if where-name
+ (format nil
+ (typecase where-value
+ (number "=~D")
+ (null " is null")
+ (t
+ (if like " like '%~A%""='~A'")))
+ where-value)
+ "")
+ (if srl (format nil " and ~:@(~A~)<=~D" lrl srl) "")
+ (if order (format nil " order by ~{~:@(~A~) ~(~A~)~^,~}" order) "")
+ (if single " limit 1" "")))
+
+
+(defmacro umlisp-query (table fields srl where-name where-value
+ &key (lrl "KCUILRL") single distinct order like)
+ "Query the UMLisp database. Return a list of umlisp objects whose name
+is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS"
+ `(mutex-sql-query
+ (query-string ,table ,fields ,srl ,where-name ,where-value
+ :lrl ,lrl :single ,single :distinct ,distinct :order ,order :like ,like)))
+
+(defmacro umlisp-query-eval (table fields srl where-name where-value
+ &key (lrl "KCUILRL") single distinct order like)
+ "Query the UMLisp database. Return a list of umlisp objects whose name
+is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS"
+ `(mutex-sql-query
+ (query-string-eval ,table ,fields ,srl ,where-name ,where-value
+ :lrl ,lrl :single ,single :distinct ,distinct :order ,order :like ,like)))
+
+;; only WHERE-VALUE and SRL are evaluated
+(defmacro with-umlisp-query ((table fields srl where-name where-value
+ &key (lrl "KCUILRL") distinct single
+ order like)
+ &body body)
+ (let ((value (gensym))
+ (r (gensym)))
+ (if single
+ `(let* ((,value ,where-value)
+ (tuple (car (umlisp-query ,table ,fields ,srl ,where-name ,value
+ :lrl ,lrl :single ,single
+ :distinct ,distinct :order ,order
+ :like ,like))))
+ ,@(unless where-name `((declare (ignore ,value))))
+ (when tuple
+ (destructuring-bind ,fields tuple
+ ,@body)))
+ `(let ((,value ,where-value))
+ ,@(unless where-name `((declare (ignore ,value))))
+ (let ((,r '()))
+ (dolist (tuple (umlisp-query ,table ,fields ,srl ,where-name ,value
+ :lrl ,lrl :single ,single :distinct ,distinct
+ :order ,order :like ,like))
+ (push (destructuring-bind ,fields tuple ,@body) ,r))
+ (nreverse ,r))
+ #+ignore
+ (loop for tuple in
+ (umlisp-query ,table ,fields ,srl ,where-name ,value
+ :lrl ,lrl :single ,single :distinct ,distinct
+ :order ,order :like ,like)
+ collect (destructuring-bind ,fields tuple ,@body))))))
+
+(defmacro with-umlisp-query-eval ((table fields srl where-name where-value
+ &key (lrl "KCUILRL") distinct single
+ order like)
+ &body body)
+ (let ((value (gensym))
+ (r (gensym))
+ (eval-fields (cadr fields)))
+ (if single
+ `(let* ((,value ,where-value)
+ (tuple (car (umlisp-query-eval ,table ,fields ,srl ,where-name ,value
+ :lrl ,lrl :single ,single
+ :distinct ,distinct :order ,order
+ :like ,like))))
+ (when tuple
+ (destructuring-bind ,eval-fields tuple
+ ,@body)))
+ `(let ((,value ,where-value)
+ (,r '()))
+ (dolist (tuple (umlisp-query-eval ,table ,fields ,srl ,where-name ,value
+ :lrl ,lrl :single ,single :distinct ,distinct
+ :order ,order :like ,like))
+ (push (destructuring-bind ,eval-fields tuple ,@body) ,r))
+ (nreverse ,r)
+ #+ignore
+ (loop for tuple in
+ (umlisp-query-eval ,table ,fields ,srl ,where-name ,value
+ :lrl ,lrl :single ,single :distinct ,distinct
+ :order ,order :like ,like)
+ collect (destructuring-bind ,eval-fields tuple ,@body))))))
+
+;;;
+;;; Read from SQL database
(defun find-ucon-cui (cui &key (srl *current-srl*))
"Find ucon for a cui"
- (when (stringp cui) (setq cui (parse-cui cui)))
- (when cui
- (let ((ls (format nil "select KPFSTR,KCUILRL from MRCON where CUI=~d" cui)))
- (when srl
- (string-append ls (format nil " and KCUILRL <= ~d" srl)))
- (string-append ls " limit 1")
- (awhen (car (mutex-sql-query ls))
- (make-instance 'ucon :cui cui :pfstr (car it)
- :lrl (ensure-integer (cadr it)))))))
+ (with-umlisp-query (mrcon (kpfstr kcuilrl) srl cui (parse-cui cui) :single t)
+ (make-instance 'ucon :cui (parse-cui cui) :pfstr kpfstr
+ :lrl (ensure-integer kcuilrl))))
(defun find-ucon-cui-sans-pfstr (cui &key (srl *current-srl*))
"Find ucon for a cui"
- (when (stringp cui) (setq cui (parse-cui cui)))
- (when cui
- (let ((ls (format nil "select KCUILRL from MRCON where CUI=~d" cui)))
- (when srl
- (string-append ls (format nil " and KCUILRL <= ~d" srl)))
- (string-append ls " limit 1")
- (awhen (car (mutex-sql-query ls))
- (make-instance 'ucon :cui cui
- :lrl (ensure-integer (cdr it)))))))
+ (with-umlisp-query (mrcon (kcuilrl) srl cui (parse-cui cui) :single t)
+ (make-instance 'ucon :cui (parse-cui cui) :lrl (ensure-integer kcuilrl)
+ :pfstr nil)))
(defun find-pfstr-cui (cui &key (srl *current-srl*))
"Find preferred string for a cui"
- (when (stringp cui)
- (setq cui (parse-cui cui)))
- (when cui
- (let ((ls (format nil "select KPFSTR from MRCON where CUI=~d" cui)))
- (when srl
- (string-append ls (format nil " and KCUILRL <= ~d" srl)))
- (string-append ls " limit 1")
- (awhen (car (mutex-sql-query ls))
- (car it)))))
+ (with-umlisp-query (mrcon (kpfstr) srl cui (parse-cui cui) :single t)
+ kpfstr))
(defun find-ucon-lui (lui &key (srl *current-srl*))
"Find list of ucon for lui"
- (when (stringp lui) (setq lui (parse-lui lui)))
- (when lui
- (let ((ucons '())
- (ls (format nil "select distinct CUI,KPFSTR,KCUILRL from MRCON where LUI=~d" lui)))
- (if srl
- (string-append ls (format nil " and KCUILRL <= ~d" srl)))
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (cui pfstr lrl) tuple
- (push (make-instance 'ucon :cui (ensure-integer cui)
- :pfstr pfstr
- :lrl (ensure-integer lrl))
- ucons)))
- (nreverse ucons))))
+ (with-umlisp-query (mrcon (cui kpfstr kcuilrl) srl lui (parse-lui lui)
+ :distinct t)
+ (make-instance 'ucon :cui (ensure-integer cui) :pfstr kpfstr
+ :lrl (ensure-integer kcuilrl))))
(defun find-ucon-sui (sui &key (srl *current-srl*))
"Find list of ucon for sui"
- (when (stringp sui) (setq sui (parse-sui sui)))
- (when sui
- (let ((ucons '())
- (ls (format nil "select distinct CUI,KPFSTR,KCUILRL from MRCON where SUI=~d" sui)))
- (when srl
- (string-append ls (format nil " and KCUILRL <= ~d" srl)))
- (let ((tuples (mutex-sql-query ls)))
- (dolist (tuple tuples)
- (destructuring-bind (cui pfstr lrl) tuple
- (push (make-instance 'ucon :cui (ensure-integer cui)
- :pfstr pfstr
- :lrl (ensure-integer lrl))
- ucons))))
- (nreverse ucons))))
+ (with-umlisp-query (mrcon (cui kpfstr kcuilrl) srl sui (parse-sui sui)
+ :distinct t)
+ (make-instance 'ucon :cui (ensure-integer cui) :pfstr kpfstr
+ :lrl (ensure-integer kcuilrl))))
(defun find-ucon-cuisui (cui sui &key (srl *current-srl*))
"Find ucon for cui/sui"
- (when (stringp cui) (setq cui (parse-cui cui)))
- (when (stringp sui) (setq sui (parse-sui sui)))
(when (and cui sui)
- (let ((ls (format nil "select distinct CUI,KPFSTR,KCUILRL from MRCON where KCUISUI=~d"
- (make-cuisui cui sui))))
- (when srl
- (string-append ls (format nil " and KCUILRL <= ~d" srl)))
- (awhen (car (mutex-sql-query ls))
- (destructuring-bind (cui pfstr lrl) it
- (make-instance 'ucon :cui (ensure-integer cui)
- :pfstr pfstr
- :lrl (ensure-integer lrl)))))))
+ (with-umlisp-query (mrcon (cui kpfstr kcuilrl) srl kcuisui
+ (make-cuisui (parse-cui cui) (parse-sui sui)))
+ (make-instance 'ucon :cui (ensure-integer cui)
+ :pfstr kpfstr
+ :lrl (ensure-integer kcuilrl)))))
(defun find-ucon-str (str &key (srl *current-srl*))
"Find ucon that are exact match for str"
- (when str
- (let ((ucons '())
- (ls (format nil "select distinct CUI,KPFSTR,KCUILRL from MRCON where STR='~a'" str)))
- (when srl
- (string-append ls " and KCUILRL <= ~d" srl))
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (cui pfstr lrl) tuple
- (push (make-instance 'ucon :cui (ensure-integer cui)
- :pfstr pfstr
- :lrl (ensure-integer lrl))
- ucons)))
- (nreverse ucons))))
+ (with-umlisp-query (mrcon (cui kpfstr kcuilrl) srl str str :distinct t)
+ (make-instance 'ucon :cui (ensure-integer cui) :pfstr kpfstr
+ :lrl (ensure-integer kcuilrl))))
(defun find-ucon-all (&key (srl *current-srl*))
"Return list of all ucon's"
- (let ((ls "select distinct CUI,KPFSTR,KCUILRL from MRCON"))
- (when srl
- (string-append ls (format nil " where KCUILRL <= ~d" srl)))
- (string-append ls " order by CUI asc")
- (with-sql-connection (db)
- (clsql:map-query
- 'list
- #'(lambda (cui pfstr cuilrl)
- (make-instance 'ucon :cui (ensure-integer cui)
- :pfstr pfstr
- :lrl (ensure-integer cuilrl)))
- ls
- :database db))))
+ (with-sql-connection (db)
+ (clsql:map-query
+ 'list
+ #'(lambda (cui pfstr cuilrl)
+ (make-instance 'ucon :cui (ensure-integer cui)
+ :pfstr pfstr
+ :lrl (ensure-integer cuilrl)))
+ (query-string mrcon (cui kpfstr kcuilrl) srl nil nil
+ :order (cui asc) :distinct t)
+ :database db)))
+
+(defun find-ucon-all2 (&key (srl *current-srl*))
+ "Return list of all ucon's"
+ (with-umlisp-query (mrcon (cui kpfstr kcuilrl) srl nil nil :order (cui asc)
+ :distinct t)
+ (make-instance 'ucon :cui (ensure-integer cui)
+ :pfstr kpfstr
+ :lrl (ensure-integer kcuilrl))))
(defun map-ucon-all (fn &key (srl *current-srl*))
- "Return list of all ucon's"
- (let ((ls "select distinct CUI,KPFSTR,KCUILRL from MRCON"))
- (when srl
- (string-append ls (format nil " where KCUILRL <= ~d" srl)))
- (string-append ls " order by CUI asc")
- (with-sql-connection (db)
- (clsql:map-query
- nil
- #'(lambda (cui pfstr cuilrl)
- (funcall fn
- (make-instance 'ucon :cui (ensure-integer cui)
- :pfstr pfstr
- :lrl (ensure-integer cuilrl))))
- ls
- :database db))))
+ "Map a function over all ucon's"
+ (with-sql-connection (db)
+ (clsql:map-query
+ nil
+ #'(lambda (cui pfstr cuilrl)
+ (funcall fn
+ (make-instance 'ucon :cui (ensure-integer cui)
+ :pfstr pfstr
+ :lrl (ensure-integer cuilrl))))
+ (query-string mrcon (cui kpfstr kcuilrl) srl nil nil :order (cui asc)
+ :distinct t)
+ :database db)))
(defun find-udef-cui (cui &key (srl *current-srl*))
"Return a list of udefs for cui"
- (let ((udefs '())
- (ls (format nil "select SAB,DEF from MRDEF where CUI=~d" cui)))
- (when srl
- (string-append ls (format nil " and KSRL <= ~d" srl)))
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (sab def) tuple
- (push (make-instance 'udef :sab sab :def def) udefs)))
- (nreverse udefs)))
+ (with-umlisp-query (mrdef (sab def) srl cui (parse-cui cui) :lrl "KSRL")
+ (make-instance 'udef :sab sab :def def)))
(defun find-usty-cui (cui &key (srl *current-srl*))
"Return a list of usty for cui"
- (let ((ustys '())
- (ls (format nil "select TUI,STY from MRSTY where CUI=~d" cui)))
- (when srl
- (string-append ls (format nil " and KLRL <= ~d" srl)))
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (tui sty) tuple
- (push (make-instance 'usty :tui (ensure-integer tui) :sty sty) ustys)))
- ustys))
+ (with-umlisp-query (mrsty (tui sty) srl cui (parse-cui cui) :lrl "KLRL")
+ (make-instance 'usty :tui (ensure-integer tui) :sty sty)))
(defun find-usty-word (word &key (srl *current-srl*))
"Return a list of usty that match word"
- (let ((ustys '())
- (ls (format nil "select distinct TUI,STY from MRSTY where STY like '%~a%'" word)))
- (when srl
- (string-append ls (format nil " and KLRL <= ~d" srl)))
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (tui sty) tuple
- (push (make-instance 'usty :tui (ensure-integer tui) :sty sty) ustys)))
- ustys))
+ (with-umlisp-query (mrsty (tui sty) srl sty word :lrl klrl :like t
+ :distinct t)
+ (make-instance 'usty :tui (ensure-integer tui) :sty sty)))
(defun find-urel-cui (cui &key (srl *current-srl*))
"Return a list of urel for cui"
- (let ((urels '())
- (ls (format nil "select REL,CUI2,RELA,SAB,SL,MG,KPFSTR2 from MRREL where CUI1=~d" cui)))
- (when srl
- (string-append ls (format nil " and KSRL <= ~d" srl)))
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (rel cui2 rela sab sl mg pfstr2) tuple
- (push (make-instance 'urel
- :cui1 cui
- :rel rel
- :cui2 (ensure-integer cui2)
- :rela rela
- :sab sab
- :sl sl
- :mg mg
- :pfstr2 pfstr2)
- urels)))
- (nreverse urels)))
+ (with-umlisp-query (mrrel (rel cui2 rela sab sl mg kpfstr2) srl cui1
+ (parse-cui cui) :lrl "KSRL")
+ (make-instance 'urel :cui1 (parse-cui cui) :rel rel
+ :cui2 (ensure-integer cui2) :rela rela :sab sab :sl sl
+ :mg mg :pfstr2 kpfstr2)))
(defun find-urel-cui2 (cui2 &key (srl *current-srl*))
"Return a list of urel for cui2"
- (let ((urels '())
- (ls (format nil "select REL,CUI1,RELA,SAB,SL,MG,KPFSTR2 from MRREL where CUI2=~d" cui2)))
- (when srl
- (string-append ls (format nil " and SRL <= ~d" srl)))
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (rel cui1 rela sab sl mg pfstr2) tuple
- (push (make-instance 'urel
- :cui2 cui2
- :rel rel
- :cui1 (ensure-integer cui1)
- :rela rela
- :sab sab
- :sl sl
- :mg mg
- :pfstr2 pfstr2)
- urels)))
- (nreverse urels)))
+ (with-umlisp-query (mrrel (rel cui1 rela sab sl mg kpfstr2) srl cui2
+ (parse-cui cui2) :lrl "KSRL")
+ (make-instance 'urel :cui2 (parse-cui cui2) :rel rel
+ :cui1 (ensure-integer cui1) :rela rela :sab sab :sl sl
+ :mg mg :pfstr2 kpfstr2)))
(defun find-ucon-rel-cui2 (cui2 &key (srl *current-srl*))
- (mapcar
- #'(lambda (cui) (find-ucon-cui cui :srl srl))
- (remove-duplicates (mapcar #'cui1 (find-urel-cui2 cui2 :srl srl)))))
+ (loop for cui in (remove-duplicates
+ (mapcar #'cui1 (find-urel-cui2 cui2 :srl srl)))
+ collect (find-ucon-cui cui :srl srl)))
(defun find-ucoc-cui (cui &key (srl *current-srl*))
"Return a list of ucoc for cui"
- (let ((ucocs '())
- (ls (format nil "select CUI2,SOC,COT,COF,COA,KPFSTR2 from MRCOC where CUI1=~d" cui)))
- (when srl
- (string-append ls (format nil " and KLRL <= ~d" srl)))
- (string-append ls " order by COF asc")
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (cui2 soc cot cof coa pfstr2) tuple
- (setq cui2 (ensure-integer cui2))
- (when (zerop cui2) (setq cui2 nil))
- (push (make-instance 'ucoc :cui1 cui
- :cui2 cui2
- :soc soc
- :cot cot
- :cof (ensure-integer cof)
- :coa coa
- :pfstr2 pfstr2)
- ucocs)))
- ucocs)) ;; akready ordered by SQL select
+ (with-umlisp-query (mrcoc (cui2 soc cot cof coa kpfstr2) srl cui1
+ (parse-cui cui) :lrl klrl :order (cof asc))
+ (setq cui2 (ensure-integer cui2))
+ (when (zerop cui2) (setq cui2 nil))
+ (make-instance 'ucoc :cui1 (parse-cui cui) :cui2 (ensure-integer cui2)
+ :soc soc :cot cot :cof (ensure-integer cof) :coa coa
+ :pfstr2 kpfstr2)))
(defun find-ucoc-cui2 (cui2 &key (srl *current-srl*))
"Return a list of ucoc for cui2"
- (let ((ucocs '())
- (ls (format nil "select CUI1,SOC,COT,COF,COA,KPFSTR2 from MRCOC where CUI2=~d" cui2)))
- (when srl
- (string-append ls (format nil " and KSRL <= ~d" srl)))
- (string-append ls " order by COF asc")
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (cui1 soc cot cof coa pfstr2) tuple
- (push (make-instance 'ucoc :cui1 (ensure-integer cui1)
- :cui2 cui2
- :soc soc
- :cot cot
- :cof (ensure-integer cof)
- :coa coa
- :pfstr2 pfstr2)
- ucocs)))
- ucocs)) ;; already ordered by SQL select
+ (with-umlisp-query (mrcoc (cui1 soc cot cof coa kpfstr2) srl cui2
+ (parse-cui cui2) :lrl klrl :order (cof asc))
+ (setq cui2 (ensure-integer cui2))
+ (when (zerop cui2) (setq cui2 nil))
+ (make-instance 'ucoc :cui1 (ensure-integer cui1) :cui2 (parse-cui cui2)
+ :soc soc :cot cot :cof (ensure-integer cof) :coa coa
+ :pfstr2 kpfstr2)))
(defun find-ucon-coc-cui2 (cui2 &key (srl *current-srl*))
"List of ucon with co-occurance cui2"
(defun find-ulo-cui (cui &key (srl *current-srl*))
"Return a list of ulo for cui"
- (let ((ulos '())
- (ls (format nil "select ISN,FR,UN,SUI,SNA,SOUI from MRLO where CUI=~d" cui)))
- (when srl
- (string-append ls (format nil " and KLRL <= ~d" srl)))
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (isn fr un sui sna soui) tuple
- (push (make-instance 'ulo :isn isn
- :fr (ensure-integer fr)
- :un un
- :sui (ensure-integer sui)
- :sna sna
- :soui soui)
- ulos)))
- (nreverse ulos)))
-
-(defgeneric suistr (lo))
-(defmethod suistr ((lo ulo))
- "Return the string for a ulo object"
- (find-string-sui (sui lo)))
+ (with-umlisp-query (mrlo (isn fr un sui sna soui) srl cui (parse-cui cui)
+ :lrl "KLRL")
+ (make-instance 'ulo :isn isn :fr (ensure-integer fr) :un un
+ :sui (ensure-integer sui) :sna sna :soui soui)))
(defun find-uatx-cui (cui &key (srl *current-srl*))
"Return a list of uatx for cui"
- (let ((uatxs '())
- (ls (format nil "select SAB,REL,ATX from MRATX where CUI=~d" cui)))
- (when srl
- (string-append ls (format nil " and KSRL <= ~d" srl)))
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (sab rel atx) tuple
- (push (make-instance 'uatx :sab sab :rel rel :atx atx) uatxs)))
- (nreverse uatxs)))
+ (with-umlisp-query (mratx (sab rel atx) srl cui (parse-cui cui) :lrl ksrl)
+ (make-instance 'uatx :sab sab :rel rel :atx atx)))
(defun find-uterm-cui (cui &key (srl *current-srl*))
"Return a list of uterm for cui"
- (let ((uterms '())
- (ls (format nil "select distinct LUI,LAT,TS,KLUILRL from MRCON where CUI=~d" cui)))
- (when srl
- (string-append ls (format nil " and KLUILRL <= ~d" srl)))
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (lui lat ts lrl) tuple
- (push (make-instance 'uterm :lui (ensure-integer lui) :cui cui
- :lat lat :ts ts :lrl (ensure-integer lrl))
- uterms)))
- (nreverse uterms)))
+ (with-umlisp-query (mrcon (lui lat ts kluilrl) srl cui (parse-cui cui)
+ :lrl kluilrl :distinct t)
+ (make-instance 'uterm :lui (ensure-integer lui) :cui (parse-cui cui)
+ :lat lat :ts ts :lrl (ensure-integer kluilrl))))
(defun find-uterm-lui (lui &key (srl *current-srl*))
"Return a list of uterm for lui"
- (if (stringp lui)
- (setq lui (parse-lui lui)))
- (let ((uterms '())
- (ls (format nil "select distinct CUI,LAT,TS,KLUILRL from MRCON where LUI=~d" lui)))
- (when srl
- (string-append ls (format nil " and KLUILRL <= ~d" srl)))
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (cui lat ts lrl) tuple
- (push (make-instance 'uterm :cui (ensure-integer cui) :lui lui
- :lat lat :ts ts :lrl (ensure-integer lrl))
- uterms)))
- (nreverse uterms)))
+ (with-umlisp-query (mrcon (cui lat ts kluilrl) srl lui (parse-lui lui)
+ :lrl kluilrl :distinct t)
+ (make-instance 'uterm :cui (ensure-integer cui) :lui (parse-lui lui)
+ :lat lat :ts ts :lrl (ensure-integer kluilrl))))
(defun find-uterm-cuilui (cui lui &key (srl *current-srl*))
"Return single uterm for cui/lui"
- (let ((ls (format nil "select LAT,TS,KLUILRL from MRCON where KCUILUI=~d limit 1" (make-cuilui cui lui))))
- (when srl (string-append ls (format nil " and KLUILRL <= ~d" srl)))
- (awhen (car (mutex-sql-query ls))
- (destructuring-bind (lat ts lrl) it
- (make-instance 'uterm :cui cui :lui lui :lat lat :ts ts
- :lrl (ensure-integer lrl))))))
+ (with-umlisp-query (mrcon (lat ts kluilrl) srl kcuilui
+ (make-cuilui (parse-cui cui) (parse-lui lui))
+ :lrl kluilrl :single t)
+ (make-instance 'uterm :cui cui :lui lui :lat lat :ts ts
+ :lrl (ensure-integer kluilrl))))
(defun find-ustr-cuilui (cui lui &key (srl *current-srl*))
"Return a list of ustr for cui/lui"
- (declare (fixnum cui lui))
- (let ((ustrs '())
- (ls (format nil "select SUI,STT,STR,LRL from MRCON where KCUILUI=~d" (make-cuilui cui lui))))
- (when srl (string-append ls (format nil " and LRL <= ~d" srl)))
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (sui stt str lrl) tuple
- (push
- (make-instance 'ustr :sui (ensure-integer sui) :cui cui :lui lui
- :cuisui (make-cuisui cui sui) :stt stt :str str
- :lrl (ensure-integer lrl))
- ustrs)))
- (nreverse ustrs)))
+ (with-umlisp-query (mrcon (sui stt str lrl) srl kcuilui
+ (make-cuilui cui lui) :lrl lrl)
+ (make-instance 'ustr :sui (ensure-integer sui) :cui cui :lui lui
+ :cuisui (make-cuisui cui sui) :stt stt :str str
+ :lrl (ensure-integer lrl))))
(defun find-ustr-cuisui (cui sui &key (srl *current-srl*))
"Return the single ustr for cuisui"
- (let ((ls (format nil "select LUI,STT,STR,LRL from MRCON where KCUISUI=~d"
- (make-cuisui cui sui))))
- (when srl (string-append ls (format nil " and LRL <= ~d" srl)))
- (awhen (car (mutex-sql-query ls))
- (destructuring-bind (lui stt str lrl) it
- (make-instance 'ustr :sui sui :cui cui
- :cuisui (make-cuisui cui sui)
- :lui (ensure-integer lui) :stt stt :str str
- :lrl (ensure-integer lrl))))))
+ (with-umlisp-query (mrcon (lui stt str lrl) srl kcuisui
+ (make-cuisui cui sui) :lrl lrl :single t)
+ (make-instance 'ustr :sui sui :cui cui :cuisui (make-cuisui cui sui)
+ :lui (ensure-integer lui) :stt stt :str str
+ :lrl (ensure-integer lrl))))
(defun find-ustr-sui (sui &key (srl *current-srl*))
"Return the list of ustr for sui"
- (if (stringp sui)
- (setq sui (parse-sui sui)))
- (let ((ustrs '())
- (ls (format nil "select CUI,LUI,STT,STR,LRL from MRCON where SUI=~d" sui)))
- (when srl (string-append ls (format nil " and LRL <= ~d" srl)))
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (cui lui stt str lrl) tuple
- (setq cui (ensure-integer cui))
- (push (make-instance 'ustr :sui sui :cui cui :stt stt :str str
- :cuisui (make-cuisui cui sui)
- :lui (ensure-integer lui)
- :lrl (ensure-integer lrl))
- ustrs)))
- (nreverse ustrs)))
+ (with-umlisp-query (mrcon (cui lui stt str lrl) srl sui (parse-sui sui)
+ :lrl lrl)
+ (make-instance 'ustr :sui sui :cui cui :stt stt :str str
+ :cuisui (make-cuisui (ensure-integer cui) (parse-sui sui))
+ :lui (ensure-integer lui) :lrl (ensure-integer lrl))))
(defun find-ustr-sab (sab &key (srl *current-srl*))
"Return the list of ustr for sab"
- (let ((ustrs '())
- (ls (format nil "select KCUISUI from MRSO where SAB='~a'" sab)))
- (when srl
- (string-append ls (format nil " and SRL <= ~d" srl)))
- (dolist (tuple (mutex-sql-query ls))
- (let ((cuisui (ensure-integer (car tuple))))
- (push (apply #'find-ustr-cuisui
- (append
- (multiple-value-list (decompose-cuisui cuisui))
- (list :srl srl)))
- ustrs)))
- (nreverse ustrs)))
+ (with-umlisp-query (mrso (kcuisui) srl sab sab :lrl srl)
+ (let ((cuisui (ensure-integer kcuisui)))
+ (apply #'find-ustr-cuisui
+ (append
+ (multiple-value-list (decompose-cuisui cuisui))
+ (list :srl srl))))))
(defun find-ustr-all (&key (srl *current-srl*))
"Return list of all ustr's"
- (let ((ls "select distinct CUI,LUI,SUI,STT,LRL,KPFSTR from MRCON"))
- (when srl
- (string-append ls (format nil " where LRL <= ~d" srl)))
- (string-append ls " order by SUI asc")
(with-sql-connection (db)
(clsql:map-query
'list
#'(lambda (cui lui sui stt lrl pfstr)
- (setq cui (ensure-integer cui))
- (setq lui (ensure-integer lui))
- (setq sui (ensure-integer sui))
- (setq lrl (ensure-integer lrl))
- (make-instance 'ustr :cui cui
- :lui lui
- :sui sui
- :cuisui (make-cuisui cui sui)
- :stt stt
- :lrl lrl
- :str pfstr))
- ls
- :database db))))
+ (make-instance 'ustr :cui (ensure-integer cui)
+ :lui (ensure-integer lui) :sui (ensure-integer sui)
+ :stt stt :str pfstr
+ :cuisui (make-cuisui (ensure-integer cui)
+ (ensure-integer sui))
+ :lrl (ensure-integer lrl)))
+ (query-string mrcon (cui lui sui stt lrl kpfstr) srl nil nil :lrl lrl
+ :distinct t
+ :order (sui asc))
+ :database db)))
(defun find-string-sui (sui &key (srl *current-srl*))
"Return the string associated with sui"
- (let ((ls (format nil "select STR from MRCON where SUI=~d" sui)))
- (when srl
- (string-append ls (format nil " and LRL <= ~d" srl)))
- (string-append ls " limit 1")
- (caar (mutex-sql-query ls))))
+ (with-umlisp-query (mrcon (str) srl sui sui :lrl lrl :single t)
+ str))
(defun find-uso-cuisui (cui sui &key (srl *current-srl*))
- (declare (fixnum cui sui))
- (let ((usos '())
- (ls (format nil "select SAB,CODE,SRL,TTY from MRSO where KCUISUI=~d"
- (make-cuisui cui sui))))
- (when srl
- (string-append ls (format nil " and SRL <= ~d" srl)))
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (sab code srl tty) tuple
- (push (make-instance 'uso :sab sab :code code :srl srl :tty tty)
- usos)))
- (nreverse usos)))
+ (with-umlisp-query (mrso (sab code srl tty) srl kcuisui
+ (make-cuisui cui sui) :lrl srl)
+ (make-instance 'uso :sab sab :code code :srl srl :tty tty)))
(defun find-ucxt-cuisui (cui sui &key (srl *current-srl*))
- (declare (fixnum cui sui))
- (let ((ucxts '())
- (ls (format nil "select SAB,CODE,CXN,CXL,RNK,CXS,CUI2,HCD,RELA,XC from MRCXT where KCUISUI=~d"
- (make-cuisui cui sui))))
- (when srl
- (string-append ls (format nil " and KSRL <= ~d" srl)))
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (sab code cxn cxl rnk cxs cui2 hcd rela xc) tuple
- (push (make-instance 'ucxt :sab sab :code code
- :cxn (ensure-integer cxn)
- :cxl cxl :cxs cxs :hcd hcd :rela rela :xc xc
- :rnk (ensure-integer rnk)
- :cui2 (ensure-integer cui2))
- ucxts)))
- (nreverse ucxts)))
+ (with-umlisp-query (mrcxt (sab code cxn cxl rnk cxs cui2 hcd rela xc)
+ srl kcuisui (make-cuisui cui sui) :lrl ksrl)
+ (make-instance 'ucxt :sab sab :code code
+ :cxn (ensure-integer cxn) :cxl cxl :cxs cxs :hcd hcd
+ :rela rela :xc xc :rnk (ensure-integer rnk)
+ :cui2 (ensure-integer cui2))))
(defun find-usat-ui (cui &optional (lui nil) (sui nil) &key (srl *current-srl*))
(let ((ls (format nil "select CODE,ATN,SAB,ATV from MRSAT where ")))
(cond
- (sui (string-append ls (format nil "KCUISUI=~d" (make-cuisui cui sui))))
- (lui (string-append ls (format nil "KCUILUI=~d and sui=0" (make-cuilui cui lui))))
- (t (string-append ls (format nil "cui=~d and lui=0 and sui=0" cui))))
+ (sui (string-append ls (format nil "KCUISUI=~D" (make-cuisui cui sui))))
+ (lui (string-append ls (format nil "KCUILUI=~D and sui=0"
+ (make-cuilui cui lui))))
+ (t (string-append ls (format nil "cui=~D and lui=0 and sui=0" cui))))
(when srl
- (string-append ls (format nil " and KSRL <= ~d" srl)))
- (let ((usats '()))
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (code atn sab atv) tuple
- (push (make-instance 'usat :code code :atn atn :sab sab :atv atv)
- usats)))
- (nreverse usats))))
-
+ (string-append ls (format nil " and KSRL <= ~D" srl)))
+ (loop for tuple in (mutex-sql-query ls) collect
+ (destructuring-bind (code atn sab atv) tuple
+ (make-instance 'usat :code code :atn atn :sab sab :atv atv)))))
(defun find-usty-tui (tui)
"Find usty for tui"
- (setq tui (parse-tui tui))
- (awhen (car (mutex-sql-query
- (format nil "select STY from MRSTY where TUI=~d limit 1" tui)))
- (make-instance 'usty :tui tui :sty (car it))))
+ (with-umlisp-query (mrsty (sty) nil tui (parse-tui tui) :single t)
+ (make-instance 'usty :tui (parse-tui tui) :sty sty)))
(defun find-usty-sty (sty)
"Find usty for a sty"
- (awhen (car (mutex-sql-query
- (format nil "select TUI from MRSTY where STY='~a' limit 1" sty)))
- (make-instance 'usty :tui (ensure-integer (car it)) :sty sty)))
+ (with-umlisp-query (mrsty (tui) nil sty sty :single t)
+ (make-instance 'usty :tui (ensure-integer tui) :sty sty)))
(defun find-usty-all ()
"Return list of usty's for all semantic types"
- (let ((ustys '()))
- (dolist (tuple (mutex-sql-query "select distinct TUI from MRSTY"))
- (push (find-usty-tui (nth 0 tuple)) ustys))
- (nreverse ustys)))
+ (with-umlisp-query (mrsty (tui) nil nil nil :distinct t)
+ (find-usty-tui tui)))
(defun find-usab-all ()
"Find usab for a key"
- (let ((results '()))
- (dolist (tuple (mutex-sql-query "select VCUI,RCUI,VSAB,RSAB,SON,SF,SVER,MSTART,MEND,IMETA,RMETA,SLC,SCC,SRL,TFR,CFR,CXTY,TTYL,ATNL,LAT,CENC,CURVER,SABIN from MRSAB"))
- (destructuring-bind
- (vcui rcui vsab rsab son sf sver mstart mend imeta rmeta slc scc srl tfr cfr cxty ttyl atnl lat cenc curver sabin) tuple
- (push
- (make-instance 'usab :vcui (ensure-integer vcui)
- :rcui (ensure-integer rcui)
- :vsab vsab :rsab rsab :son son :sf sf :sver sver :mstart mstart
- :mend mend :imeta imeta :rmeta rmeta :slc slc :scc scc
- :srl (ensure-integer srl)
- :tfr (ensure-integer tfr) :cfr (ensure-integer cfr)
- :cxty cxty :ttyl ttyl :atnl atnl :lat lat :cenc cenc
- :curver curver :sabin sabin)
- results)))
- (nreverse results)))
+ (with-umlisp-query (mrsab (vcui rcui vsab rsab son sf sver mstart mend imeta
+ rmeta slc scc srl tfr cfr cxty ttyl atnl lat
+ cenc curver sabin) nil nil nil)
+ (make-instance 'usab :vcui (ensure-integer vcui)
+ :rcui (ensure-integer rcui) :vsab vsab :rsab rsab :son son
+ :sf sf :sver sver :mstart mstart :mend mend :imeta imeta
+ :rmeta rmeta :slc slc :scc scc :srl (ensure-integer srl)
+ :tfr (ensure-integer tfr) :cfr (ensure-integer cfr)
+ :cxty cxty :ttyl ttyl :atnl atnl :lat lat :cenc cenc
+ :curver curver :sabin sabin)))
(defun find-usab-by-key (key-name key)
"Find usab for a key"
- (aif (car (mutex-sql-query
- (format nil "select VCUI,RCUI,VSAB,RSAB,SON,SF,SVER,MSTART,MEND,IMETA,RMETA,SLC,SCC,SRL,TFR,CFR,CXTY,TTYL,ATNL,LAT,CENC,CURVER,SABIN from MRSAB where ~A='~A'" key-name key)))
- (destructuring-bind
- (vcui rcui vsab rsab son sf sver mstart mend imeta rmeta slc scc srl tfr cfr cxty ttyl atnl lat cenc curver sabin) it
- (make-instance 'usab :vcui (ensure-integer vcui)
- :rcui (ensure-integer rcui)
- :vsab vsab :rsab rsab :son son :sf sf :sver sver :mstart mstart
- :mend mend :imeta imeta :rmeta rmeta :slc slc :scc scc
- :srl (ensure-integer srl)
- :tfr (ensure-integer tfr) :cfr (ensure-integer cfr)
- :cxty cxty :ttyl ttyl :atnl atnl :lat lat :cenc cenc
- :curver curver :sabin sabin))))
+ (with-umlisp-query-eval ('mrsab '(vcui rcui vsab rsab son sf sver mstart
+ mend imeta rmeta slc scc srl tfr cfr cxty
+ ttyl atnl lat cenc curver sabin)
+ nil key-name key :single t)
+ (make-instance 'usab :vcui (ensure-integer vcui)
+ :rcui (ensure-integer rcui) :vsab vsab :rsab rsab :son son
+ :sf sf :sver sver :mstart mstart :mend mend :imeta imeta
+ :rmeta rmeta :slc slc :scc scc :srl (ensure-integer srl)
+ :tfr (ensure-integer tfr) :cfr (ensure-integer cfr)
+ :cxty cxty :ttyl ttyl :atnl atnl :lat lat :cenc cenc
+ :curver curver :sabin sabin)))
(defun find-usab-rsab (rsab)
"Find usab for rsab"
- (find-usab-by-key "RSAB" rsab))
+ (find-usab-by-key 'rsab rsab))
(defun find-usab-vsab (vsab)
"Find usab for vsab"
- (find-usab-by-key "VSAB" vsab))
+ (find-usab-by-key 'vsab vsab))
(defun find-cui-max ()
- (let ((cui (caar (mutex-sql-query "select max(CUI) from MRCON"))))
- (ensure-integer cui)))
+ (ensure-integer (caar (mutex-sql-query "select max(CUI) from MRCON"))))
;;;; Cross table find functions
(defun find-ucon-tui (tui &key (srl *current-srl*))
"Find list of ucon for tui"
- (when (stringp tui) (setq tui (parse-tui tui)))
- (let ((ucons '())
- (ls (format nil "select CUI from MRSTY where TUI=~d" tui)))
- (when srl (string-append ls (format nil " and KLRL <= ~d" srl)))
- (string-append ls " order by cui desc")
- (dolist (tuple (mutex-sql-query ls))
- (push (find-ucon-cui (ensure-integer (car tuple)) :srl srl) ucons))
- ucons))
+ (with-umlisp-query (mrsty (cui) srl tui (parse-tui tui) :lrl klrl :order (cui asc))
+ (find-ucon-cui (ensure-integer cui) :srl srl)))
(defun find-ucon-word (word &key (srl *current-srl*) (like nil))
"Return list of ucons that match word. Optionally, use SQL's LIKE syntax"
- (let ((ucons '())
- (ls (format nil "select distinct cui from MRXW_ENG where wd~A'~A'"
- (if like " LIKE " "=")
- word)))
- (when srl (string-append ls (format nil " and KLRL <= ~d" srl)))
- (string-append ls " order by cui desc")
- (dolist (tuple (mutex-sql-query ls))
- (push (find-ucon-cui (car tuple) :srl srl) ucons))
- ucons))
+ (with-umlisp-query-eval ('mrxw_eng '(cui) srl 'wd word :like like :distinct t
+ :lrl 'klrl :order '(cui asc))
+ (find-ucon-cui cui :srl srl)))
(defun find-ucon-normalized-word (word &key (srl *current-srl*) (like nil))
"Return list of ucons that match word, optionally use SQL's LIKE syntax"
- (let ((ucons '())
- (ls (format nil "select distinct cui from MRXNW_ENG where nwd~A'~A'"
- (if like " LIKE " "=")
- word)))
- (when srl (string-append ls (format nil " and KLRL <= ~d" srl)))
- (string-append ls " order by cui desc")
- (dolist (tuple (mutex-sql-query ls))
- (push (find-ucon-cui (car tuple) :srl srl) ucons))
- ucons))
+ (with-umlisp-query-eval ('mrxnw_eng '(cui) srl 'nwd word :like like :distinct t
+ :lrl 'klrl :order '(cui asc))
+ (find-ucon-cui cui :srl srl)))
(defun find-ustr-word (word &key (srl *current-srl*))
"Return list of ustrs that match word"
- (let ((ustrs '())
- (ls (format nil "select cui,sui from MRXW_ENG where wd='~a'" word)))
- (when srl (string-append ls (format nil " and KLRL <= ~d" srl)))
- (string-append ls " order by cui desc,sui desc")
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (cui sui) tuple
- (push (find-ustr-cuisui (ensure-integer cui) (ensure-integer sui)
- :srl srl)
- ustrs)))
- ustrs))
+ (with-umlisp-query (mrxw_eng (cui sui) srl wd word :lrl klrl
+ :order (cui asc sui asc))
+ (find-ustr-cuisui (ensure-integer cui) (ensure-integer sui) :srl srl)))
(defun find-ustr-normalized-word (word &key (srl *current-srl*))
"Return list of ustrs that match word"
- (let ((ustrs '())
- (ls (format nil "select cui,sui from MRXNW_ENG where nwd='~a'" word)))
- (when srl
- (string-append ls (format nil " and KLRL <= ~d" srl)))
- (string-append ls " order by cui desc,sui desc")
- (dolist (tuple (mutex-sql-query ls))
- (destructuring-bind (cui sui) tuple
- (push (find-ustr-cuisui (ensure-integer cui) (ensure-integer sui)
- :srl srl)
- ustrs)))
- ustrs))
+ (with-umlisp-query (mrxnw_eng (cui sui) srl nwd word :lrl klrl
+ :order (cui asc sui asc))
+ (find-ustr-cuisui (ensure-integer cui) (ensure-integer sui) :srl srl)))
+
+(defun find-ucon-noneng-word (word &key (srl *current-srl*) (like nil))
+ "Return list of ucons that match non-english word"
+ (with-umlisp-query-eval ('mrxw_noneng '(cui) srl 'wd word :like like
+ :distinct t :lrl 'klrl :order '(cui asc))
+ (find-ucon-cui cui :srl srl)))
+
+(defun find-ustr-noneng-word (word &key (srl *current-srl*))
+ "Return list of ustrs that match non-english word"
+ (with-umlisp-query (mrxw_noneng (cui sui) srl wd word :lrl klrl
+ :order (cui asc sui asc))
+ (find-ustr-cuisui (ensure-integer cui) (ensure-integer sui) :srl srl)))
;; Special tables
(defun find-usrl-all ()
- (let ((usrls '())
- (tuples (mutex-sql-query "select SAB,SRL from USRL order by SAB desc")))
- (dolist (tuple tuples)
- (destructuring-bind (sab srl) tuple
- (push (make-instance 'usrl :sab sab :srl (ensure-integer srl)) usrls)))
- usrls))
+ (with-umlisp-query (usrl (sab srl) nil nil nil :order (sab asc))
+ (make-instance 'usrl :sab sab :srl (ensure-integer srl))))
;;; Multiword lookup and score functions
"Sort a list of objects based on scoring to a string"
(let ((scored '()))
(dolist (obj objs)
- (push
- (list obj
- (score-multiword-match str (funcall lookup-func obj)))
+ (push (list obj (score-multiword-match str (funcall lookup-func obj)))
scored))
(mapcar #'car (sort scored #'> :key #'cadr))))
;;; LEX SQL functions
(defun find-lexterm-eui (eui)
- (awhen (car (mutex-sql-query
- (format nil "select WRD from LRWD where EUI=~d" eui)))
- (make-instance 'lexterm :eui eui :wrd (car it))))
+ (with-umlisp-query (lrwd (wrd) nil eui eui :single t)
+ (make-instance 'lexterm :eui eui :wrd wrd)))
(defun find-lexterm-word (wrd)
- (let ((tuples (mutex-sql-query
- (format nil "select EUI from LRWD where WRD='~a'" wrd)))
- (terms '()))
- (dolist (tuple tuples)
- (push (make-instance 'lexterm :eui (ensure-integer (car tuple))
- :wrd (copy-seq wrd))
- terms))
- (nreverse terms)))
+ (with-umlisp-query (lrwd (eui) nil wrd wrd)
+ (make-instance 'lexterm :eui (ensure-integer eui)
+ :wrd (copy-seq wrd))))
;; LEX SQL Read functions
(defun find-labr-eui (eui)
- (let ((tuples
- (mutex-sql-query
- (format nil "select BAS,ABR,EUI2,BAS2 from LRABR where EUI=~d" eui)))
- (results '()))
- (dolist (tuple tuples)
- (destructuring-bind (bas abr eui2 bas2) tuple
- (push (make-instance 'labr :eui eui :bas bas :abr abr :bas2 bas2
- :eui2 (ensure-integer eui2))
- results)))
- (nreverse results)))
+ (with-umlisp-query (lrabr (bas abr eui2 bas2) nil eui eui)
+ (make-instance 'labr :eui eui :bas bas :abr abr :bas2 bas2
+ :eui2 (ensure-integer eui2))))
(defun find-labr-bas (bas)
- (let ((tuples
- (mutex-sql-query
- (format nil "select EUI,ABR,EUI2,BAS2 from LRABR where BAS='~a'"
- bas)))
- (results '()))
- (dolist (tuple tuples)
- (destructuring-bind (eui abr eui2 bas2) tuple
- (push
- (make-instance 'labr :eui (ensure-integer eui) :abr abr :bas2 bas2
- :bas (copy-seq bas) :eui2 (ensure-integer eui2))
- results)))
- (nreverse results)))
+ (with-umlisp-query (labr (eui abr eui2 bas2) nil bas bas)
+ (make-instance 'labr :eui (ensure-integer eui) :abr abr :bas2 bas2
+ :bas (copy-seq bas) :eui2 (ensure-integer eui2))))
(defun find-lagr-eui (eui)
- (let ((tuples
- (mutex-sql-query
- (format nil "select STR,SCA,AGR,CIT,BAS from LRAGR where EUI=~d" eui)))
- (results '()))
- (dolist (tuple tuples)
- (destructuring-bind (str sca agr cit bas) tuple
- (push (make-instance 'lagr :eui eui :str str :sca sca :agr agr :
- cit cit :bas bas)
- results)))
- (nreverse results)))
+ (with-umlisp-query (lragr (str sca agr cit bas) nil eui eui)
+ (make-instance 'lagr :eui eui :str str :sca sca :agr agr
+ :cit cit :bas bas)))
(defun find-lcmp-eui (eui)
- (let ((tuples (mutex-sql-query
- (format nil "select BAS,SCA,COM from LRCMP where EUI=~d" eui)))
- (results '()))
- (dolist (tuple tuples)
- (destructuring-bind (bas sca com) tuple
- (push (make-instance 'lcmp :eui eui :bas bas :sca sca :com com)
- results)))
- (nreverse results)))
+ (with-umlisp-query (lrcmp (bas sca com) nil eui eui)
+ (make-instance 'lcmp :eui eui :bas bas :sca sca :com com)))
(defun find-lmod-eui (eui)
- (let ((tuples
- (mutex-sql-query
- (format nil
- "select BAS,SCA,PSN_MOD,FEA from LRMOD where EUI=~d" eui)))
- (results '()))
- (dolist (tuple tuples)
- (destructuring-bind (bas sca psnmod fea) tuple
- (push (make-instance 'lmod :eui eui :bas bas :sca sca :psnmod psnmod
- :fea fea)
- results)))
- (nreverse results)))
+ (with-umlisp-query (lrmod (bas sca psn_mod fea) nil eui eui)
+ (make-instance 'lmod :eui eui :bas bas :sca sca :psnmod psn_mod :fea fea)))
(defun find-lnom-eui (eui)
- (let ((tuples
- (mutex-sql-query
- (format
- nil "select BAS,SCA,EUI2,BAS2,SCA2 from LRNOM where EUI=~d" eui)))
- (results '()))
- (dolist (tuple tuples)
- (destructuring-bind (bas sca eui2 bas2 sca2) tuple
- (push
- (make-instance 'lnom :eui eui :bas bas :sca sca :bas2 bas2 :sca2 sca2
- :eui2 (ensure-integer eui2))
- results)))
- (nreverse results)))
+ (with-umlisp-query (lrnom (bas sca eui2 bas2 sca2) nil eui eui)
+ (make-instance 'lnom :eui eui :bas bas :sca sca :bas2 bas2 :sca2 sca2
+ :eui2 (ensure-integer eui2))))
(defun find-lprn-eui (eui)
- (let ((tuples
- (mutex-sql-query
- (format
- nil
- "select BAS,NUM,GND,CAS,POS,QNT,FEA from LRPRN where EUI=~d" eui)))
- (results '()))
- (dolist (tuple tuples)
- (destructuring-bind (bas num gnd cas pos qnt fea) tuple
- (push (make-instance 'lprn :eui eui :bas bas :num num :gnd gnd
- :cas cas :pos pos :qnt qnt :fea fea)
- results)))
- (nreverse results)))
+ (with-umlisp-query (lrprn (bas num gnd cas pos qnt fea) nil eui eui)
+ (make-instance 'lprn :eui eui :bas bas :num num :gnd gnd
+ :cas cas :pos pos :qnt qnt :fea fea)))
(defun find-lprp-eui (eui)
- (let ((tuples
- (mutex-sql-query
- (format nil "select BAS,STR,SCA,FEA from LRPRP where EUI=~d" eui)))
- (results '()))
- (dolist (tuple tuples)
- (destructuring-bind (bas str sca fea) tuple
- (push
- (make-instance 'lprp :eui eui :bas bas :str str :sca sca :fea fea)
- results)))
- (nreverse results)))
+ (with-umlisp-query (lrprp (bas str sca fea) nil eui eui)
+ (make-instance 'lprp :eui eui :bas bas :str str :sca sca :fea fea)))
(defun find-lspl-eui (eui)
- (let ((tuples (mutex-sql-query
- (format nil "select SPV,BAS from LRSPL where EUI=~d" eui)))
- (results '()))
- (dolist (tuple tuples)
- (destructuring-bind (spv bas) tuple
- (push (make-instance 'lspl :eui eui :spv spv :bas bas) results)))
- (nreverse results)))
+ (with-umlisp-query (lrspl (spv bas) nil eui eui)
+ (make-instance 'lspl :eui eui :spv spv :bas bas)))
(defun find-ltrm-eui (eui)
- (let ((tuples (mutex-sql-query
- (format nil "select BAS,GEN from LRTRM where EUI=~d" eui)))
- (results '()))
- (dolist (tuple tuples)
- (destructuring-bind (bas gen) tuple
- (push (make-instance 'ltrm :eui eui :bas bas :gen gen) results)))
- (nreverse results)))
+ (with-umlisp-query (lrtrm (bas gen) nil eui eui)
+ (make-instance 'ltrm :eui eui :bas bas :gen gen)))
(defun find-ltyp-eui (eui)
- (let ((tuples (mutex-sql-query
- (format nil "select BAS,SCA,TYP from LRTYP where EUI=~d" eui)))
- (results '()))
- (dolist (tuple tuples)
- (destructuring-bind (bas sca typ) tuple
- (push (make-instance 'ltyp :eui eui :bas bas :sca sca :typ typ)
- results)))
- (nreverse results)))
+ (with-umlisp-query (lrtyp (bas sca typ) nil eui eui)
+ (make-instance 'ltyp :eui eui :bas bas :sca sca :typ typ)))
(defun find-lwd-wrd (wrd)
- (let ((tuples (mutex-sql-query
- (format nil "select EUI from LRWD where WRD='~a'" wrd)))
- (results '()))
- (dolist (tuple tuples)
- (push (ensure-integer (car tuple)) results))
- (make-instance 'lwd :wrd wrd :euilist (nreverse results))))
+ (make-instance 'lwd :wrd
+ :euilist (with-umlisp-query (lrwd (eui) nil wrd wrd)
+ (ensure-integer eui))))
;;; Semantic Network SQL access functions
-
+
(defun find-sdef-ui (ui)
- (awhen (car (mutex-sql-query
- (format nil "select RT,STY_RL,STN_RTN,DEF,EX,UN,RH,ABR,RIN from SRDEF where UI=~d" ui)))
- (destructuring-bind (rt styrl stnrtn def ex un rh abr rin) it
- (make-instance 'sdef :rt rt :ui ui :styrl styrl :stnrtn stnrtn
- :def def :ex ex :un un :rh rh :abr abr :rin rin))))
+ (with-umlisp-query (srdef (rt sty_rl stn_rtn def ex un rh abr rin)
+ nil ui ui :single t)
+ (make-instance 'sdef :rt rt :ui ui :styrl sty_rl :stnrtn stn_rtn
+ :def def :ex ex :un un :rh rh :abr abr :rin rin)))
(defun find-sstre1-ui (ui)
- (let ((tuples (mutex-sql-query
- (format nil "select UI2,UI3 from SRSTRE1 where UI=~d" ui)))
- (results '()))
- (dolist (tuple tuples)
- (destructuring-bind (ui2 ui3) tuple
- (push (make-instance 'sstre1 :ui ui :ui2 (ensure-integer ui2)
- :ui3 (ensure-integer ui3))
- results)))
- (nreverse results)))
+ (with-umlisp-query (srstre1 (ui2 ui3) nil ui ui)
+ (make-instance 'sstre1 :ui ui :ui2 (ensure-integer ui2)
+ :ui3 (ensure-integer ui3))))
(defun find-sstre1-ui2 (ui2)
- (let ((tuples (mutex-sql-query
- (format nil "select UI,UI3 from SRSTRE1 where UI2=~d" ui2)))
- (results '()))
- (dolist (tuple tuples)
- (destructuring-bind (ui ui3) tuple
- (push (make-instance 'sstre1 :ui (ensure-integer ui) :ui2 ui2
- :ui3 (ensure-integer ui3))
- results)))
- (nreverse results)))
+ (with-umlisp-query (srstre1 (ui ui3) nil ui2 ui2)
+ (make-instance 'sstre1 :ui (ensure-integer ui) :ui2 ui2
+ :ui3 (ensure-integer ui3))))
(defun find-sstr-rl (rl)
- (let ((tuples
- (mutex-sql-query
- (format nil "select STY_RL,STY_RL2,LS from SRSTRE where RL='~a'" rl)))
- (results '()))
- (dolist (tuple tuples)
- (destructuring-bind (styrl styrl2 ls) tuple
- (push (make-instance 'sstr :rl rl :styrl styrl :styrl2 styrl2 :ls ls)
- results)))
- (nreverse results)))
-
+ (with-umlisp-query (srstre (sty_rl sty_rl2 ls) nil rl rl)
+ (make-instance 'sstr :rl rl :styrl sty_rl :styrl2 sty_rl2 :ls ls)))
(defun find-sstre2-sty (sty)
- (let ((tuples (mutex-sql-query
- (format nil "select RL,STY2 from SRSTRE2 where STY='~a'" sty)))
- (results '()))
- (dolist (tuple tuples)
- (destructuring-bind (rl sty2) tuple
- (push (make-instance 'sstre2 :sty (copy-seq sty) :rl rl :sty2 sty2)
- results)))
- (nreverse results)))
+ (with-umlisp-query (srstre2 (rl sty2) nil sty sty)
+ (make-instance 'sstre2 :sty (copy-seq sty) :rl rl :sty2 sty2)))
(defun find-sstr-styrl (styrl)
- (let ((tuples
- (mutex-sql-query
- (format nil "select RL,STY_RL2,LS from SRSTR where RL='~a'" styrl)))
- (results '()))
- (dolist (tuple tuples)
- (destructuring-bind (rl styrl2 ls) tuple
- (push (make-instance 'sstr :styrl styrl :rl rl :styrl2 styrl2 :ls ls)
- results)))
- (nreverse results)))
+ (with-umlisp-query (srstr (rl sty_rl2 ls) nil styrl styrl)
+ (make-instance 'sstr :styrl styrl :rl rl :styrl2 sty_rl2 :ls ls)))
projects / umlisp.git / blobdiff