;;;; Author: Kevin M. Rosenberg
;;;; Created: Apr 2000
;;;;
-;;;; $Id$
-;;;;
;;;; This file, part of UMLisp, is
-;;;; Copyright (c) 2000-2006 by Kevin M. Rosenberg, M.D.
+;;;; Copyright (c) 2000-2010 by Kevin M. Rosenberg, M.D.
;;;;
;;;; UMLisp users are granted the rights to distribute and use this software
;;;; as governed by the terms of the GNU General Public License.
(defvar +umls-sql-map+
'((:2004aa . "KUMLS2004AA")
- (:2006ac . "KUMLS2006AC")))
-(defvar +default-umls-db+ :2006ac)
-
+ (:2006ac . "KUMLS2006AC")
+ (:2006ad . "MTS2006AD")
+ (:2009ab . "MTS2009AB")))
+(defvar +default-umls-db+ "MTS2009AB")
(defun lookup-db-name (db)
(cdr (assoc (ensure-keyword db) +umls-sql-map+)))
(defun umls-sql-db ()
*umls-sql-db*)
-(defun umls-sql-db! (db)
+(defun set-umls-sql-db (db)
(etypecase db
(string
(setq *umls-sql-db* db))
(defvar *umls-sql-user* "secret")
(defun umls-sql-user ()
*umls-sql-user*)
-(defun umls-sql-user! (u)
+(defun set-umls-sql-user (u)
(sql-disconnect-pooled)
(setq *umls-sql-user* u))
(defvar *umls-sql-passwd* "secret")
(defun umls-sql-passwd ()
*umls-sql-passwd*)
-(defun umls-sql-passwd! (p)
+(defun set-umls-sql-passwd (p)
(sql-disconnect-pooled)
(setq *umls-sql-passwd* p))
(defvar *umls-sql-host* "localhost")
(defun umls-sql-host ()
*umls-sql-host*)
-(defun umls-sql-host! (h)
+(defun set-umls-sql-host (h)
(sql-disconnect-pooled)
(setq *umls-sql-host* h))
(defvar *umls-sql-type* :mysql)
(defun umls-sql-type ()
*umls-sql-type*)
-(defun umls-sql-type! (h)
+(defun set-umls-sql-type (h)
(sql-disconnect-pooled)
(setq *umls-sql-type* h))
(defun umls-connection-spec ()
- (list *umls-sql-host* *umls-sql-db*
- *umls-sql-user* *umls-sql-passwd*))
+ (if (eql *umls-sql-type* :mysql)
+ (list *umls-sql-host* *umls-sql-db*
+ *umls-sql-user* *umls-sql-passwd*
+ nil '((:local-infile . 1)))
+ (list *umls-sql-host* *umls-sql-db*
+ *umls-sql-user* *umls-sql-passwd*)))
(defun sql-connect ()
"Connect to UMLS database, automatically used pooled connections"
(clsql:connect (umls-connection-spec)
- :database-type *umls-sql-type* :pool t))
+ :database-type *umls-sql-type*
+ :encoding :utf-8
+ :pool t))
(defun sql-disconnect (conn)
"Disconnect from UMLS database, but put connection back into pool"
(defmacro with-sql-connection ((conn) &body body)
`(let ((,conn (sql-connect)))
(unwind-protect
- (progn ,@body)
+ (progn ,@body)
(when ,conn (clsql:disconnect :database ,conn)))))
(defun sql-query (cmd conn &key (result-types :auto))
(defmacro with-mutex-sql ((conn) &body body)
`(let ((,conn (sql-connect)))
(unwind-protect
- (progn ,@body)
+ (progn ,@body)
(when ,conn (sql-disconnect ,conn)))))
(defun mutex-sql-execute (cmd)