(setq *rt-parse*
'(
(deftest :parse/1
- (umlisp::decompose-fil "abc")
+ (umlisp::decompose-fil "abc")
"abc" nil)
-
+
(deftest :parse/2
- (umlisp::decompose-fil "dir/abc")
+ (umlisp::decompose-fil "dir/abc")
"abc" "dir")
-
+
(deftest :parse/3
- (umlisp::decompose-fil nil)
+ (umlisp::decompose-fil nil)
nil nil)
-
+
(deftest :parse/4
- (umlisp::filename-to-tablename "test")
+ (umlisp::filename-to-tablename "test")
"test")
-
+
(deftest :parse/5
- (umlisp::filename-to-tablename "TEST.AB.RRF")
+ (umlisp::filename-to-tablename "TEST.AB.RRF")
"TEST_AB")))
+;; specific for UMLS2007AA
(when (probe-file (umlisp::umls-pathname "MRFILES.RRF"))
(umlisp::ensure-ucols+ufiles)
(setq
(append
*rt-parse*
'(
- (deftest uparse.1 (length *umls-files*) 64)
- (deftest uparse.2 (length *umls-cols*) 327)
+ (deftest uparse.1 (length *umls-files*) 63)
+ (deftest uparse.2 (length *umls-cols*) 452)
(deftest uparse.3
- (sort (mapcar #'u::col (umlisp::ucols (umlisp::find-ufile "MRCONSO.RRF")))
- #'string<)
- ("AUI" "CODE" "CUI" "CVF" "ISPREF" "KCUILRL" "KCUILUI" "KCUISUI" "KLUILRL" "KPFSTR" "LAT" "LUI" "SAB" "SAUI" "SCUI" "SDUI" "SRL" "STR"
- "STT" "SUI" "SUPPRESS" "TS" "TTY"))
+ (sort (mapcar #'u::col (umlisp::ucols (umlisp::find-ufile "MRCONSO.RRF")))
+ #'string<)
+ ("AUI" "CODE" "CUI" "CVF" "ISPREF" "KCUILRL" "KCUILUI" "KCUISUI" "KLUILRL"
+ "KPFENG" "KSUILRL" "LAT" "LUI" "SAB" "SAUI" "SCUI" "SDUI" "SRL" "STR" "STT"
+ "SUI" "SUPPRESS" "TS" "TTY"))
(deftest uparse.4
- (equal
- (sort (mapcar #'u::col (umlisp::ucols (umlisp::find-ufile "MRCONSO.RRF")))
- #'string<)
- (sort (umlisp::fields (umlisp::find-ufile "MRCONSO.RRF"))
- #'string<))
- t)
+ (equal
+ (sort (mapcar #'u::col (umlisp::ucols (umlisp::find-ufile "MRCONSO.RRF")))
+ #'string<)
+ (sort (copy-seq (umlisp::fields (umlisp::find-ufile "MRCONSO.RRF")))
+ #'string<))
+ t)
(deftest uparse.5
- (sort
- (umlisp::custom-colnames-for-filename "MRCONSO.RRF")
- #'string<)
- ("KCUILRL" "KCUILUI" "KCUISUI" "KLUILRL" "KPFSTR"))
+ (sort
+ (umlisp::custom-colnames-for-filename "MRCONSO.RRF")
+ #'string<)
+ ("KCUILRL" "KCUILUI" "KCUISUI" "KLUILRL" "KPFENG" "KSUILRL"))
(deftest uparse.6
- (compiled-function-p
- (umlisp::custom-value-fun
- (umlisp::find-ucol "KCUISUI" "MRCONSO.RRF")))
- t)
+ (compiled-function-p
+ (umlisp::custom-value-fun
+ (umlisp::find-ucol "KCUISUI" "MRCONSO.RRF")))
+ t)
))))