doc/ctsim.tex

   1 \documentclass[letterpaper,12pt]{report}%
   2 \usepackage{graphicx}
   3 \usepackage{texhelp}
   4 \usepackage{fancyhea}
   5 \usepackage{mysober}
   6 \usepackage{mytitle}
   7 \usepackage{verbatim}
   8 \usepackage{makeidx}
   9 %\usepackage{times}
  10 \usepackage{hyperref}
  11 \input{psbox.tex}
  12
  13 \latexonly{\includeonly{ctsim-concepts,ctsim-install,ctsim-gui,ctsim-textui,ctsim-web,ctsim-appendix}}
  14 \hyphenation{poly-gon-al}
  15
  16 \newcommand{\ctsim}{\texttt{CTSim}}
  17 \newcommand{\ctsimtext}{\texttt{CTSimText}}
  18 \newcommand{\usage}{\textbf{Usage}\par}
  19
  20 \newcommand{\commandref}[2]{\helpref{{\tt $\backslash$#1}}{#2}}%
  21 \newcommand{\commandrefn}[2]{\helprefn{{\tt $\backslash$#1}}{#2}\index{#1}}%
  22 \newcommand{\commandpageref}[2]{\latexignore{\helprefn{{\tt $\backslash$#1}}{#2}}\latexonly{{\tt $\backslash$#1} {\it page \pageref{#2}}}\index{#1}}
  23 \newcommand{\indexit}[1]{#1\index{#1}}%
  24 \newcommand{\inioption}[1]{{\bf {\tt #1}}\index{#1}}%
  25
  26 \newcommand{\manvernum}[0]{0.5}
  27 \newcommand{\manver}[0]{v\manvernum}
  28 \newcommand{\mandate}[0]{February 15, 2001}
  29 \newcommand{\ctsimfooter}{\setfooter{\thepage}{}{}{\small Manual \manver}{\small \mandate}{\thepage}}
  30 \newcommand{\doublehyphen}[1]{-\,-\texttt{#1}}
  31 \newcommand{\ctsimvernum}[0]{3.0.0}
  32 \newcommand{\ctsimver}[0]{CTSim \ctsimvernum}
  33 \newcommand{\ctsimheadtitle}{\ctsimver Manual}
  34
  35 \latexignore{\newcommand{\sqrt}[2]{sqrt(#2)}}
  36
  37 \parskip=10pt%
  38 \parindent=0pt%
  39 %\backgroundcolour{255;255;255}\textcolour{0;0;0}% Has an effect in HTML only
  40 \title{CTSim 3.0 User Manual}%
  41 \author{Kevin Rosenberg, M.D.}%
  42 \makeindex%
  43
  44 \begin{document}
  45 \textheight=9in
  46 \textwidth=6.5in
  47 \evensidemargin=0in
  48 \oddsidemargin=0in
  49
  50 \maketitle
  51 \pagestyle{fancyplain}
  52 \pagenumbering{roman}
  53
  54 \setheader{{\it CONTENTS}}{}{}{\ctsimheadtitle}{}{{\it CONTENTS}}%
  55 \ctsimfooter
  56 \parskip=2pt
  57 \tableofcontents%
  58
  59 \parskip=10pt
  60 \chapter*{Copyright notice}%
  61 \setheader{{\it COPYRIGHT}}{}{}{\ctsimheadtitle}{}{{\it COPYRIGHT}}%
  62 \setfooter{\thepage}{}{}{}{\manver}{\thepage}%
  63
  64 Copyright (c) 1983-2001 Kevin Rosenberg, M.D.
  65
  66 Permission to use, copy, modify, and distribute this software and its
  67 documentation for any purpose is hereby granted without fee, provided that the
  68 above copyright notice, author statement and this permission notice appear in
  69 all copies of this software and related documentation.
  70
  71 THE SOFTWARE IS PROVIDED ``AS-IS'' AND WITHOUT WARRANTY OF ANY KIND, EXPRESS,
  72 IMPLIED OR OTHERWISE, INCLUDING WITHOUT LIMITATION, ANY WARRANTY OF
  73 MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE.
  74
  75 IN NO EVENT SHALL KEVIN ROSENBERG BE LIABLE FOR ANY
  76 SPECIAL, INCIDENTAL, INDIRECT OR CONSEQUENTIAL DAMAGES OF ANY KIND, OR
  77 ANY DAMAGES WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS,
  78 WHETHER OR NOT ADVISED OF THE POSSIBILITY OF DAMAGE, AND ON ANY THEORY
  79 OF LIABILITY, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
  80 PERFORMANCE OF THIS SOFTWARE.
  81
  82 \chapter{Introduction}\label{IDH_INTRODUCTION}\index{Introduction}
  83 \pagenumbering{arabic}
  84 \setheader{{\it CHAPTER \thechapter}}{}{}{\ctsimheadtitle}{}{{\it CHAPTER \thechapter}}%
  85 \ctsimfooter
  86
  87
  88 \centerline{\image{3cm;3cm}{logo-huge.eps}}
  89 Computed Tomography is a technique for estimating the interior of an
  90 object from measurement of radiation collected around the object. This
  91 radiation can be either projected through or emitted from the
  92 object. \ctsim\ simulates the process of projecting X-rays
  93 through a phantom object. \ctsim\ can then reconstruct the
  94 interior of the object from those projections. \ctsim\ integrates
  95 numerous visualization and analytic tools.
  96
  97 This manual begins with an introduction into the concepts of
  98 \ctsim. Next, the graphical, command-line, and web shells are
  99 presented. Finally, the installation of \ctsim\ is discussed.
 100
 101 I hope that you enjoy \ctsim!
 102
 103 \include{ctsim-concepts}
 104 \include{ctsim-gui}
 105 \include{ctsim-textui}
 106 \include{ctsim-web}
 107 \include{ctsim-install}
 108 \include{ctsim-appendix}
 109
 110 \newpage
 111
 112 \bibliographystyle{plain}
 113 \bibliography{ctsim}
 114 \addcontentsline{toc}{chapter}{Bibliography}
 115 \setheader{{\it REFERENCES}}{}{}{\ctsimheadtitle}{}{{\it REFERENCES}}
 116 \ctsimfooter
 117
 118 \addcontentsline{toc}{chapter}{Index}
 119 \setheader{{\it INDEX}}{}{}{\ctsimheadtitle}{}{{\it INDEX}} %
 120 \ctsimfooter
 121 \printindex
 122
 123 \end{document}