doc/ctsim.tex

   1 \documentclass[letterpaper,12pt]{report}%
   2 \usepackage{graphicx}
   3 \usepackage{texhelp}
   4 \usepackage{fancyhea}
   5 \usepackage{mysober}
   6 \usepackage{mytitle}
   7 \usepackage{verbatim}
   8 \usepackage{makeidx}
   9 %\usepackage{times}
  10 \usepackage{hyperref}
  11 \input{psbox.tex}
  12
  13 \latexonly{\includeonly{ctsim-concepts,ctsim-install,ctsim-gui,ctsim-textui,ctsim-web,ctsim-appendix}}
  14 \hyphenation{poly-gon-al}
  15
  16 \newcommand{\ctsim}{\texttt{CTSim}}
  17 \newcommand{\ctsimtext}{\texttt{CTSimText}}
  18 \newcommand{\usage}{\textbf{Usage}\par}
  19
  20 \newcommand{\commandref}[2]{\helpref{{\tt $\backslash$#1}}{#2}}%
  21 \newcommand{\commandrefn}[2]{\helprefn{{\tt $\backslash$#1}}{#2}\index{#1}}%
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  23 \newcommand{\indexit}[1]{#1\index{#1}}%
  24 \newcommand{\inioption}[1]{{\bf {\tt #1}}\index{#1}}%
  25
  26 \newcommand{\manvernum}[0]{0.4}
  27 \newcommand{\manver}[0]{v\manvernum}
  28 \newcommand{\mandate}[0]{February 14, 2001}
  29 \newcommand{\ctsimfooter}{\setfooter{\thepage}{}{}{\small Manual \manver}{\small \mandate}{\thepage}}
  30 \newcommand{\doublehyphen}[1]{-\,-\texttt{#1}}
  31 \newcommand{\ctsimvernum}[0]{3.0.0beta2}
  32 \newcommand{\ctsimver}[0]{CTSim \ctsimvernum}
  33 \newcommand{\ctsimheadtitle}{\ctsimver Manual}
  34
  35 \latexignore{\newcommand{\sqrt}[2]{sqrt(#2)}}
  36
  37 \parskip=10pt%
  38 \parindent=0pt%
  39 %\backgroundcolour{255;255;255}\textcolour{0;0;0}% Has an effect in HTML only
  40 \title{CTSim 3.0 User Manual}%
  41 \author{Kevin Rosenberg, M.D.}%
  42 \date{February 9, 2001}%
  43 \makeindex%
  44
  45 \begin{document}
  46 \textheight=9in
  47 \textwidth=6.5in
  48 \topmargin=-0.25in
  49 \evensidemargin=0in
  50 \oddsidemargin=0in
  51
  52 \maketitle
  53 \pagestyle{fancyplain}
  54 \pagenumbering{roman}
  55
  56 \setheader{{\it CONTENTS}}{}{}{\ctsimheadtitle}{}{{\it CONTENTS}}%
  57 \ctsimfooter
  58 \parskip=2pt
  59 \tableofcontents%
  60
  61 \parskip=10pt
  62 \chapter*{Copyright notice}%
  63 \setheader{{\it COPYRIGHT}}{}{}{\ctsimheadtitle}{}{{\it COPYRIGHT}}%
  64 \setfooter{\thepage}{}{}{}{\manver}{\thepage}%
  65
  66 Copyright (c) 1983-2001 Kevin Rosenberg, M.D.
  67
  68 Permission to use, copy, modify, and distribute this software and its
  69 documentation for any purpose is hereby granted without fee, provided that the
  70 above copyright notice, author statement and this permission notice appear in
  71 all copies of this software and related documentation.
  72
  73 THE SOFTWARE IS PROVIDED ``AS-IS'' AND WITHOUT WARRANTY OF ANY KIND, EXPRESS,
  74 IMPLIED OR OTHERWISE, INCLUDING WITHOUT LIMITATION, ANY WARRANTY OF
  75 MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE.
  76
  77 IN NO EVENT SHALL KEVIN ROSENBERG BE LIABLE FOR ANY
  78 SPECIAL, INCIDENTAL, INDIRECT OR CONSEQUENTIAL DAMAGES OF ANY KIND, OR
  79 ANY DAMAGES WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS,
  80 WHETHER OR NOT ADVISED OF THE POSSIBILITY OF DAMAGE, AND ON ANY THEORY
  81 OF LIABILITY, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
  82 PERFORMANCE OF THIS SOFTWARE.
  83
  84 \chapter{Introduction}\label{introduction}
  85 \pagenumbering{arabic}
  86 \setheader{{\it CHAPTER \thechapter}}{}{}{\ctsimheadtitle}{}{{\it CHAPTER \thechapter}}%
  87 \ctsimfooter
  88
  89
  90 \centerline{\image{3cm;3cm}{logo-huge.eps}}
  91 Computed Tomography is a technique for estimating the interior of an
  92 object from measurement of radiation collected around the object. This
  93 radiation can be either projected through or emitted from the
  94 object. \ctsim\ simulates the process of projecting X-rays
  95 through a phantom object. \ctsim\ can then reconstruct the
  96 interior of the object from those projections. \ctsim\ integrates
  97 numerous visualization and analytic tools.
  98
  99 This manual begins with an introduction into the concepts of
 100 \ctsim. Next, the graphical, command-line, and web shells are
 101 presented. Finally, the installation of \ctsim is discussed.
 102
 103 I hope that you enjoy \ctsim!
 104
 105 \include{ctsim-concepts}
 106 \include{ctsim-gui}
 107 \include{ctsim-textui}
 108 \include{ctsim-web}
 109 \include{ctsim-install}
 110 \include{ctsim-appendix}
 111
 112 \newpage
 113
 114 \bibliographystyle{plain}
 115 \bibliography{ctsim}
 116 \addcontentsline{toc}{chapter}{Bibliography}
 117 \setheader{{\it REFERENCES}}{}{}{\ctsimheadtitle}{}{{\it REFERENCES}}
 118 \ctsimfooter
 119
 120 \addcontentsline{toc}{chapter}{Index}
 121 \setheader{{\it INDEX}}{}{}{\ctsimheadtitle}{}{{\it INDEX}} %
 122 \ctsimfooter
 123 \printindex
 124
 125 \end{document}