r548: no message
[ctsim.git] / doc / ctsim.tex
index 73deaf43dbbce8090180e9cdebb2bf174a68aff3..5b6286de81a83935dcdd8e4d1d130990e530b075 100644 (file)
@@ -1,10 +1,10 @@
-\documentclass[11pt]{report}%
+\documentclass[letterpaper,11pt]{report}%
 \usepackage{graphicx}
 \usepackage{texhelp}
 \usepackage{fancyhea}
-%\usepackage{mysober}
+\usepackage{mysober}
 \usepackage{mytitle}
-%\usepackage{verbatim}
+\usepackage{verbatim}
 \usepackage{makeidx}
 %\usepackage{times}
 \usepackage{hyperref}
 \newcommand{\indexit}[1]{#1\index{#1}}%
 \newcommand{\inioption}[1]{{\bf {\tt #1}}\index{#1}}%
 
-\latexignore{\newcommand{\sqrt}[2]{sqrt(#2)}}%
+\newcommand{\manvernum}[0]{0.6}
+\newcommand{\manver}[0]{v\manvernum}
+\newcommand{\mandate}[0]{February 16, 2001}
+\newcommand{\ctsimfooter}{\setfooter{\thepage}{}{}{\small Manual \manver}{\small \mandate}{\thepage}}
+\newcommand{\doublehyphen}[1]{-\,-\texttt{#1}}
+\newcommand{\ctsimvernum}[0]{3.0.0}
+\newcommand{\ctsimver}[0]{CTSim \ctsimvernum}
+\newcommand{\ctsimheadtitle}{\ctsimver\ Manual}
+
+\latexignore{\newcommand{\sqrt}[2]{sqrt(#2)}}
 
 \parskip=10pt%
 \parindent=0pt%
 %\backgroundcolour{255;255;255}\textcolour{0;0;0}% Has an effect in HTML only
 \title{CTSim 3.0 User Manual}%
 \author{Kevin Rosenberg, M.D.}%
-\date{February 9, 2001}%
 \makeindex%
 
-\begin{document}%
-\maketitle%
-\pagestyle{fancyplain}%
-\pagenumbering{roman}%
+\begin{document}
+\textheight=9in
+\textwidth=6.5in
+\evensidemargin=0in
+\oddsidemargin=0in
 
-\setheader{{\it CONTENTS}}{}{}{}{}{{\it CONTENTS}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
-\parskip=2pt
-\tableofcontents%
+\maketitle
+\pagestyle{fancyplain}
+\pagenumbering{roman}
 
-\parskip=10pt
 \chapter*{Copyright notice}%
-\setheader{{\it COPYRIGHT}}{}{}{}{}{{\it COPYRIGHT}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
+\setheader{{\it COPYRIGHT}}{}{}{\ctsimheadtitle}{}{{\it COPYRIGHT}}%
+\setfooter{\thepage}{}{}{}{\manver}{\thepage}%
 
 Copyright (c) 1983-2001 Kevin Rosenberg, M.D.
 
@@ -66,38 +73,52 @@ WHETHER OR NOT ADVISED OF THE POSSIBILITY OF DAMAGE, AND ON ANY THEORY
 OF LIABILITY, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
 PERFORMANCE OF THIS SOFTWARE.
 
-\chapter{Introduction}\label{introduction}%
-\pagenumbering{arabic}%
-\setheader{{\it CHAPTER \thechapter}}{}{}{}{}{{\it CHAPTER \thechapter}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
+\chapter*{Acknowledgements}
+\setheader{{\it COPYRIGHT}}{}{}{\ctsimheadtitle}{}{{\it COPYRIGHT}}%
+\setfooter{\thepage}{}{}{}{\manver}{\thepage}%
+
+\textbf{Ian Kay, Ph.D.}\\
+Dr. Kay has contributed portions to this manual. He has also assisted the
+development of \ctsim\ with his bug reports and fixes.
 
-$$\image{3cm;3cm}{logo-huge.eps}$$
-Computed Tomography is a technique for estimating the interior of an object
-from measurement of radiation collected around the object. This radiation
-can be either projected through or emitted from the object.
-\rtfsp\ctsim\ simulates the process of projecting X-rays through a phantom object.
-\rtfsp\ctsim\ can then reconstruct the interior of the object from the projections
-collected around the phantom object.
+\textbf{Gabor T. Herman, Ph.D.}\\
+Dr. Herman's publications on computed tomography provided me with my initial inspiration
+to create \ctsim\ back in 1983. Dr. Herman has graciously permitted use of his
+copyrighted head phantom for use in \ctsim.
+
+
+\setheader{{\it CONTENTS}}{}{}{\ctsimheadtitle}{}{{\it CONTENTS}}%
+\ctsimfooter
+\parskip=2pt
+\tableofcontents%
+
+\parskip=10pt
+\chapter{Introduction}\label{IDH_INTRODUCTION}
+\pagenumbering{arabic}
+\setheader{{\it CHAPTER \thechapter}}{}{}{\ctsimheadtitle}{}{{\it CHAPTER \thechapter}}%
+\ctsimfooter
+
+
+\centerline{\image{3cm;3cm}{logo-huge.eps}}
+Computed Tomography is a technique for estimating the interior of an
+object from measurement of radiation collected around the object. This
+radiation can be either projected through or emitted from the
+object. \ctsim\ simulates the process of projecting X-rays
+through a phantom object. \ctsim\ can then reconstruct the
+interior of the object from those projections. \ctsim\ integrates
+numerous visualization and analytic tools.
 
 This manual begins with an introduction into the concepts of
-\rtfsp\ctsim. Then, the graphical shell, \helprefn{ctsim}{ctsim},
-is documented followed the the command-line shell,
-\helprefn{ctsimtext}{ctsimtext}. Finally, the web-based
-\helprefn{interface}{webinterface} is discussed followed by
-\helprefn{installation}{installation} instructions.
+\ctsim. Next, the graphical, command-line, and web shells are
+presented. Finally, the installation of \ctsim\ is discussed.
 
 I hope that you enjoy \ctsim!
 
 \include{ctsim-concepts}
-
 \include{ctsim-gui}
-
 \include{ctsim-textui}
-
 \include{ctsim-web}
-
 \include{ctsim-install}
-
 \include{ctsim-appendix}
 
 \newpage
@@ -105,12 +126,13 @@ I hope that you enjoy \ctsim!
 \bibliographystyle{plain}
 \bibliography{ctsim}
 \addcontentsline{toc}{chapter}{Bibliography}
-\setheader{{\it REFERENCES}}{}{}{}{}{{\it REFERENCES}}%
-\setfooter{\thepage}{}{}{}{}{\thepage}%
+\setheader{{\it REFERENCES}}{}{}{\ctsimheadtitle}{}{{\it REFERENCES}}
+\ctsimfooter
 
+\newpage
 \addcontentsline{toc}{chapter}{Index}
-\setheader{{\it INDEX}}{}{}{}{}{{\it INDEX}} %
-\setfooter{\thepage}{}{}{}{}{\thepage} %
-\printindex %
+\setheader{{\it INDEX}}{}{}{\ctsimheadtitle}{}{{\it INDEX}} %
+\ctsimfooter
+\printindex
 
-\end{document}%
+\end{document}