"Returns T if UCON has a semantic type of TUI."
(some #'(lambda (usty) (= tui (tui usty))) (s#sty ucon)))
-(defgeneric suistr (lo))
-(defmethod suistr ((lo ulo))
- "Return the string for a ulo object"
- (find-string-sui (sui lo)))
-
(defgeneric pf-ustr (obj))
(defmethod pf-ustr ((ucon ucon))
"Return the preferred ustr for a ucon"
((char-equal #\O c)
"Other"))))
-
-(defun ucon-parents (ucon &key sab include-rb)
- (ucon-ancestors ucon :sab sab :include-rb include-rb
- :ancestors nil))
-
-(defun is-ucon-in-ancestors (ucon ancestors)
- (cond
- ((null ancestors) nil)
- ((atom ancestors) (eql (cui ucon) (cui ancestors)))
- ((listp (car ancestors))
- (or (is-ucon-in-ancestors ucon (car ancestors))
- (is-ucon-in-ancestors ucon (cdr ancestors))))
- (t
- (or (eql (cui ucon) (cui (car ancestors)))
- (is-ucon-in-ancestors ucon (cdr ancestors))))))
-
-
-(defun sorted-ancestor-cuis (anc)
- (sort (remove-duplicates (map 'list 'cui (flatten anc))) #'<))
-
-(defun shared-cuis (a1 a2)
- (let ((cl1 (sorted-ancestor-cuis a1))
- (cl2 (sorted-ancestor-cuis a2))
- (shared nil))
- (dolist (c1 cl1 (nreverse shared))
- (dolist (c2 cl2)
- (cond
- ((eql c1 c2)
- (push c1 shared))
- ((> c2 c1)
- (return)))))))
-
-(defun cdist-ancestors (anc1 anc2)
- (let ((shareds (shared-cuis anc1 anc2)))
- (let ((min most-positive-fixnum)
- (cui-min nil)
- (path-min nil))
- (declare (fixnum min))
- (dolist (shared shareds)
- (multiple-value-bind (d1 p1) (ancestor-distance shared anc1)
- (multiple-value-bind (d2 p2) (ancestor-distance shared anc2)
- (let ((dtotal (+ d1 d2)))
- (declare (fixnum d1 d2 dtotal))
- (when (< dtotal min)
- (format t "~D ~D ~D ~S ~S~%" d1 d2 dtotal p1 p2)
- (setq min dtotal
- cui-min shared
- path-min (append p1 (cdr (reverse p2)))
- ))))))
- (values min cui-min path-min))))
-
-(defun cdist-metric (c1 c2 &key sab include-rb full-ucon (srl *current-srl*))
- (let* ((anc1 (ucon-ancestors c1 :sab sab :include-rb include-rb :full-ucon full-ucon :srl srl))
- (anc2 (ucon-ancestors c2 :sab sab :include-rb include-rb :full-ucon full-ucon :srl srl)))
- (multiple-value-bind (min cui path)
- (cdist-ancestors (list* c1 anc1) (list* c2 anc2))
- (if cui
- (values min cui (append (list c1) path (unless (eql (cui (car (last path))) (cui c2))
- (list c2))))
- (values nil nil nil)))))
-
-
-(defun ancestor-distance (cui ancestors &key (distance 0) path)
- (cond
- ((null ancestors)
- nil)
- ((atom ancestors)
- (when (eql cui (cui ancestors))
- (values distance (nreverse (list* ancestors path)))))
- ((atom (car ancestors))
- (if (eql cui (cui (car ancestors)))
- (values distance (nreverse (list* (car ancestors) path)))
- (ancestor-distance cui (cdr ancestors) :distance distance :path (list* (car ancestors) path))))
- (t
- (let ((%min most-positive-fixnum)
- %path)
- (dolist (a ancestors)
- (multiple-value-bind (d p) (ancestor-distance cui a :distance (1+ distance) :path path)
- (when (and d (< d %min))
- (setq %min d
- %path p))))
- (when (< %min most-positive-fixnum)
- (values %min %path))))))
-
-
-(defun ucon-ancestors (ucon &key sab include-rb ancestors full-ucon (srl *current-srl*))
- "Returns a list of ancestor lists for a concept"
- (unless ucon (return-from ucon-ancestors nil))
- (let ((parent-rels (find-urel-cui
- (cui ucon)
- :without-pfstr2 t
- :srl srl
- :filter (concatenate 'string
- (if sab (format nil "SAB='~A' AND " sab) "")
- (if include-rb
- "(REL='RB' OR REL='PAR')"
- "REL='PAR'"))))
- (parents nil))
- (dolist (rel parent-rels)
- (let ((parent (if full-ucon
- (find-ucon-cui (cui2 rel))
- (make-ucon-cui (cui2 rel)))))
- ;; (format t "~S ~S ~S ~S~%" rel ucon parent ancestors)
- (unless (is-ucon-in-ancestors parent ancestors)
- (push
- (list*
- parent
- (ucon-ancestors parent :sab (sab rel) :ancestors (append (list parent) ancestors)
- :full-ucon full-ucon))
- parents))))
- (nreverse parents)))
-
-
-(defgeneric cxt-ancestors (obj))
-(defmethod cxt-ancestors ((con ucon))
- (loop for term in (s#term con)
- append (cxt-ancestors term)))
-
-
-(defmethod cxt-ancestors ((term uterm))
- (loop for str in (s#str term)
- append (cxt-ancestors str)))
-
-(defmethod cxt-ancestors ((str ustr))
- "Return the ancestory contexts of a ustr"
- (let* ((anc (remove-if-not
- (lambda (cxt) (string-equal "ANC" (cxl cxt)))
- (s#cxt str)))
- (num-contexts (if anc
- (apply #'max (mapcar (lambda (cxt) (cxn cxt)) anc))
- 0))
- (anc-lists '()))
- (dotimes (i num-contexts (nreverse anc-lists))
- (let* ((anc-this-cxn (remove-if-not
- (lambda (cxt) (= (1+ i) (cxn cxt))) anc)))
- (push
- (sort anc-this-cxn (lambda (a b) (< (rank a) (rank b))))
- anc-lists)))))
-
(defun uso-unique-codes (usos)
(let ((sab-codes (make-hash-table :test 'equal)))
(dolist (uso usos)
(loop for key being the hash-key in sab-codes
collect (list key (gethash key sab-codes)))))
-
(defun ucon-has-sab (ucon sab)
(and (find-if (lambda (uso) (string-equal sab (sab uso))) (s#so ucon)) t))
#+scl
-(dolist (c '(urank udef usat uso ucxt ustr ulo uterm usty urel ucoc uatx ucon uxw uxnw uxns lexterm labr lagr lcmp lmod lnom lprn lprp lspl ltrm ltyp lwd sdef sstr sstre1 sstre2 usrl))
+(dolist (c '(urank udef usat uso ucxt ustr uterm usty urel ucoc uatx uconso uxw uxnw uxns lexterm labr lagr lcmp lmod lnom lprn lprp lspl ltrm ltyp lwd sdef sstr sstre1 sstre2 usrl))
(let ((cl (find-class c)))
(clos:finalize-inheritance cl)))
projects / umlisp.git / blobdiff