;;;; Author: Kevin M. Rosenberg
;;;; Created: Apr 2000
;;;;
-;;;; $Id$
-;;;;
;;;; This file, part of UMLisp, is
-;;;; Copyright (c) 2000-2006 by Kevin M. Rosenberg, M.D.
+;;;; Copyright (c) 2000-2010 by Kevin M. Rosenberg, M.D.
;;;;
;;;; UMLisp users are granted the rights to distribute and use this software
;;;; as governed by the terms of the GNU General Public License.
(suppress :value-type string :initarg :suppress :reader suppress))
(:metaclass hyperobject-class)
(:user-name "Rank")
- (:default-print-slots rank sab tty suppres))
+ (:default-print-slots rank sab tty suppress))
(defclass udef (umlsclass)
((def :value-type cdata :initarg :def :reader def)
(rcui :value-type fixnum :initarg :rcui :reader rcui :print-formatter fmt-cui)
(vsab :value-type string :initarg :vsab :reader vsab)
(rsab :value-type string :initarg :rsab :reader rsab :hyperlink find-ustr-sab
- :hyperlink-parameters (("subobjects" . "no")))
+ :hyperlink-parameters (("subobjects" . "no")))
(son :value-type string :initarg :son :reader son)
(sf :value-type string :initarg :sf :reader sf)
(sver :value-type string :initarg :sver :reader sver)
(:metaclass hyperobject-class)
(:user-name "Source Abbreviation")
(:default-print-slots vcui rcui vsab rsab son sf sver vstart vend imeta
- rmeta slc scc srl tfr cfr cxty ttyl atnl lat cenc
- curver sabin ssn scit))
+ rmeta slc scc srl tfr cfr cxty ttyl atnl lat cenc
+ curver sabin ssn scit))
(defclass uhier (umlsclass)
((cui :value-type fixnum :initarg :cui :reader cui :hyperlink find-ucon-cui
- :print-formatter fmt-cui)
+ :print-formatter fmt-cui)
(aui :value-type fixnum :initarg :aui :reader aui :hyperlink find-ucon-aui
- :print-formatter fmt-aui)
+ :print-formatter fmt-aui)
(cxn :value-type fixnum :initarg :cxn :reader cxn)
(paui :value-type fixnum :initarg :paui :reader paui
- :print-formatter fmt-aui)
+ :print-formatter fmt-aui)
(sab :value-type string :initarg :sab :reader sab :hyperlink find-usab-rsab)
(rela :value-type string :initarg :rela :reader rela)
(ptr :value-type string :initarg :ptr :reader ptr)
(defclass ustr (umlsclass)
((sui :value-type fixnum :initarg :sui :reader sui :print-formatter fmt-sui
- :hyperlink find-ustr-sui)
+ :hyperlink find-ustr-sui)
(cui :value-type fixnum :initarg :cui :reader cui :print-formatter fmt-cui
- :hyperlink find-ucon-cui)
+ :hyperlink find-ucon-cui)
(lui :value-type fixnum :initarg :lui :reader lui :print-formatter fmt-lui
- :hyperlink find-uterm-lui)
+ :hyperlink find-uterm-lui)
(cuisui :value-type integer :initarg :cuisui :reader cuisui )
(str :value-type cdata :initarg :str :reader str)
(lrl :value-type fixnum :initarg :lrl :reader lrl)
(stt :value-type string :initarg :stt :reader stt)
(suppress :value-type string :initarg :suppress :reader suppress)
(s#so :reader s#so :subobject (find-uso-cuisui cui sui))
- (s#sat :reader s#sat :subobject (find-usat-ui cui :lui lui :sui sui)))
+ (s#sat :reader s#sat :subobject (find-usat-ui cui lui sui)))
(:metaclass hyperobject-class)
(:user-name "String")
(:default-print-slots sui stt lrl str suppress))
((aui :value-type fixnum :initarg :aui :reader aui :print-formatter fmt-aui
:hyperlink find-ucon-aui)
(cui :value-type fixnum :initarg :cui :reader cui :print-formatter fmt-cui
- :hyperlink find-ucon-cui)
+ :hyperlink find-ucon-cui)
(sui :value-type fixnum :initarg :sui :reader sui :print-formatter fmt-sui
- :hyperlink find-ucon-sui)
+ :hyperlink find-ucon-sui)
(saui :value-type string :initarg :saui :reader saui)
(sdui :value-type string :initarg :sdui :reader sdui)
(scui :value-type string :initarg :scui :reader scui)
(sab :value-type string :initarg :sab :reader sab :hyperlink find-usab-rsab)
(lat :value-type string :initarg :lat :reader lat)
(str :value-type cdata :initarg :str :reader str)
- (srl :value-type fixnum :initarg :srl :reader srl))
+ (srl :value-type fixnum :initarg :srl :reader srl)
+ (ts :value-type string :initarg :ts :reader ts))
(:metaclass hyperobject-class)
(:user-name "Source")
- (:default-print-slots aui sab code saui sdui scui tty srl))
+ (:default-print-slots aui sab code saui sdui scui tty srl ts))
(defclass uterm (umlsclass)
((lui :value-type fixnum :initarg :lui :reader lui :print-formatter fmt-lui
- :hyperlink find-uterm-lui)
+ :hyperlink find-uterm-lui)
(cui :value-type fixnum :initarg :cui :reader cui :print-formatter fmt-cui
- :hyperlink find-ucon-cui)
+ :hyperlink find-ucon-cui)
(lat :value-type string :initarg :lat :reader lat)
(ts :value-type string :initarg :ts :reader ts)
(lrl :value-type fixnum :initarg :lrl :reader lrl)
(s#str :reader s#str :subobject (find-ustr-cuilui cui lui))
- (s#sat :reader s#sat :subobject (find-usat-ui cui :lui lui)))
+ (s#sat :reader s#sat :subobject (find-usat-ui cui lui)))
(:metaclass hyperobject-class)
(:user-name "Term")
(:default-print-slots lui lat ts lrl))
(defclass usty (umlsclass)
((tui :value-type fixnum :initarg :tui :reader tui :print-formatter fmt-tui
- :hyperlink find-ucon-tui
- :hyperlink-parameters (("subobjects" . "no")))
+ :hyperlink find-ucon-tui
+ :hyperlink-parameters (("subobjects" . "no")))
(sty :value-type string :initarg :sty :reader sty))
(:metaclass hyperobject-class)
(:user-name "Semantic Type")
(:default-print-slots tui sty))
(defclass urel (umlsclass)
- ((rel :value-type string :initarg :rel :reader rel :hyperlink find-brel-rel)
+ ((rel :value-type string :initarg :rel :reader rel)
(cui1 :value-type fixnum :initarg :cui1 :reader cui1 :print-formatter fmt-cui)
(aui1 :value-type fixnum :initarg :aui1 :reader aui1 :print-formatter fmt-aui)
(stype1 :value-type string :initarg :stype1 :reader stype1)
- (cui2 :value-type fixnum :initarg :cui2 :reader cui2 :hyperlink find-ucon-sui
- :print-formatter fmt-cui)
+ (cui2 :value-type fixnum :initarg :cui2 :reader cui2 :hyperlink find-ucon-cui
+ :print-formatter fmt-cui)
(aui2 :value-type fixnum :initarg :aui2 :reader aui2 :hyperlink find-ucon-aui
- :print-formatter fmt-aui)
+ :print-formatter fmt-aui)
(pfstr2 :value-type cdata :initarg :pfstr2 :reader pfstr2)
(stype2 :value-type string :initarg :stype2 :reader stype2)
(rela :value-type string :initarg :rela :reader rela)
(:user-name "Relationship")
(:default-print-slots stype1 rel cui2 aui2 stype2 rela rui srui sab sl rg dir suppress pfstr2))
+#+mrcoc
(defclass ucoc (umlsclass)
((cui1 :value-type fixnum :initarg :cui1 :reader cui1 :print-formatter fmt-cui)
(aui1 :value-type fixnum :initarg :aui1 :reader aui1 :print-formatter fmt-aui)
(cui2 :value-type fixnum :initarg :cui2 :reader cui2 :print-formatter fmt-cui
- :hyperlink find-ucon-cui)
+ :hyperlink find-ucon-cui)
(aui2 :value-type fixnum :initarg :aui2 :reader aui2 :print-formatter fmt-aui
- :hyperlink find-ucon-aui)
+ :hyperlink find-ucon-aui)
(pfstr2 :value-type cdata :initarg :pfstr2 :reader pfstr2)
(sab :value-type string :initarg :sab :reader sab)
(cot :value-type string :initarg :cot :reader cot)
(defclass ucon (umlsclass)
((cui :value-type fixnum :initarg :cui :reader cui :print-formatter fmt-cui
- :hyperlink find-ucon-cui)
+ :hyperlink find-ucon-cui)
(lrl :value-type fixnum :initarg :lrl :reader lrl
:compute-cached-value (find-lrl-cui cui))
(pfstr :value-type cdata :initarg :pfstr :reader pfstr
(s#term :reader s#term :subobject (find-uterm-cui cui))
(s#sat :reader s#sat :subobject (find-usat-ui cui))
(s#rel :reader s#rel :subobject (find-urel-cui cui))
- (s#coc :reader s#coc :subobject (find-ucoc-cui cui)))
+ #+mrcoc (s#coc :reader s#coc :subobject (find-ucoc-cui cui))
+ )
(:metaclass hyperobject-class)
(:user-name "Concept")
(:default-print-slots cui lrl pfstr))
(defclass uconso (umlsclass)
((cui :value-type fixnum :initarg :cui :reader cui :print-formatter fmt-cui
- :hyperlink find-ucon-cui)
+ :hyperlink find-ucon-cui)
(pfstr :value-type cdata :initarg :pfstr :reader pfstr
:compute-cached-value (find-pfstr-cui cui))
(lat :value-type string :initarg :lat :reader lat)
(s#term :reader s#term :subobject (find-uterm-cui cui))
(s#sat :reader s#sat :subobject (find-usat-ui cui))
(s#rel :reader s#rel :subobject (find-urel-cui cui))
- (s#coc :reader s#coc :subobject (find-ucoc-cui cui)))
- (:documentation "CONSO is a new concept from the RRF files. This object is a rather raw row from the MRCONSO table.")
+ #+mrcoc (s#coc :reader s#coc :subobject (find-ucoc-cui cui))
+ )
+ (:documentation "CONSO is a new concept from the RRF files.")
(:metaclass hyperobject-class)
(:user-name "Concept")
(:default-print-slots cui kcuilrl str sab))
(:metaclass hyperobject-class)
(:user-name "Mapping")
(:default-print-slots mapsetcui mapsetsab mapsubsetid maprank fromid fromsid fromexpr fromtype
- fromrule fromres rel rela toid tosid toexpr totype torule tores maprule
- maptype mapatn mapatv))
+ fromrule fromres rel rela toid tosid toexpr totype torule tores maprule
+ maptype mapatn mapatv))
(defclass usmap (umlsclass)
((mapsetcui :value-type fixnum :initarg :mapsetcui :reader mapsetcui)
(defclass lexterm (umlsclass)
((eui :value-type fixnum :initarg :eui :reader eui :print-formatter fmt-eui
- :hyperlink find-lexterm-eui)
+ :hyperlink find-lexterm-eui)
(wrd :value-type string :initarg :wrd :reader wrd)
(s#abr :reader s#abr :subobject (find-labr-eui eui))
(s#agr :reader s#agr :subobject (find-lagr-eui eui))
(ui3 :value-type integer :initarg :ui3 :reader ui3 :print-formatter fmt-tui))
(:metaclass hyperobject-class)
(:user-name "Fully Inherited Set of Relation (TUIs)"
- "Fully Inherited Set of Relations (TUIs)")
+ "Fully Inherited Set of Relations (TUIs)")
(:default-print-slots ui ui2 ui3))
(defclass sstre2 (umlsclass)
(sty2 :value-type string :initarg :ui3 :reader sty2))
(:metaclass hyperobject-class)
(:user-name "Fully Inherited Set of Relation (strings)"
- "Fully Inherited Set of Relations (strings)")
+ "Fully Inherited Set of Relations (strings)")
(:default-print-slots sty rl sty2))
(defclass ustats (umlsclass)
((name :value-type string :initarg :name :reader name)
(hits :value-type integer :initarg :hits :reader hits
- :user-name "count"
- :print-formatter fmt-comma-integer)
+ :user-name "count"
+ :print-formatter fmt-comma-integer)
(srl :value-type fixnum :initarg :srl :reader srl))
(:metaclass hyperobject-class)
(:default-initargs :name nil :hits nil :srl nil)
(:user-name "UMLS Statistic")
(:default-print-slots name hits srl)
(:documentation "Custom Table: UMLS Database statistics."))
-
projects / umlisp.git / blobdiff