(%%where (when where-name
(format nil " where ~:@(~A~)~A" where-name
(if like " like " ""))))
- (%%limit (gensym "LIMIT-"))
- (%%filter (gensym "FILTER-")))
- `(let ((%%limit ,limit)
- (%%filter ,filter))
+ (%filter (gensym "FILTER-"))
+ (%single (gensym "SINGLE-"))
+ (%limit (gensym "LIMIT-")))
+ `(let ((,%limit ,limit)
+ (,%single ,single)
+ (,%filter ,filter))
(concatenate
'string
,%%fields
" is null")
(t
(format nil ,(if like "'%~A%'" "='~A'") ,where-value)))))
- (if ##filter (concatenate 'string " AND " ##filter) "")
+ (if ,%filter (concatenate 'string
+ ,(if %%where " AND " " WHERE ")
+ ,%filter) "")
(if ,srl (concatenate 'string ,%%lrl (write-to-string ,srl)) "")
,@(when %%order (list %%order))
- (if (or ,single ##limit)
- (cond
- ((and ,single (> ##limit 1))
- (error "Can't set single and limit > 1."))
- (,single
- " LIMIT 1")
- (##limit
- (format nil " LIMIT ~D" ##limit))
- (t
- ""))
- "")))))
+ (cond
+ ((and ,%single ,%limit)
+ (error "Can't set single and limit"))
+ (,%single
+ " LIMIT 1")
+ (,%limit
+ (format nil " LIMIT ~D" ,%limit))
+ (t
+ ""))))))
(defun query-string-eval (table fields &optional srl where-name where-value
&key (lrl "KCUILRL") single distinct order like limit filter)
`(,query-cmd
(query-string ,table ,fields ,srl ,where-name ,where-value
:lrl ,lrl :single ,single :distinct ,distinct :order ,order :like ,like
- :filter filter :limit ,limit)))
+ :filter ,filter :limit ,limit)))
(defmacro umlisp-query-eval (table fields srl where-name where-value
- &key (lrl "KCUILRL") single distinct order like
+ &key (lrl "KCUILRL") single distinct order like
filter limit)
"Query the UMLisp database. Return a list of umlisp objects whose name
is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS"
`(mutex-sql-query
(query-string-eval ,table ,fields ,srl ,where-name ,where-value
:lrl ,lrl :single ,single :distinct ,distinct :order ,order :like ,like
- :filter filter :limit ,limit)))
+ :filter ,filter :limit ,limit)))
;; only WHERE-VALUE and SRL are evaluated
(defmacro collect-umlisp-query ((table fields srl where-name where-value
(setq ,sui (parse-sui ,sui))
,sui))
+(defmacro ensure-aui-integer (aui)
+ `(if (stringp ,aui)
+ (setq ,aui (parse-aui ,aui))
+ ,aui))
+
+(defmacro ensure-rui-integer (rui)
+ `(if (stringp ,rui)
+ (setq ,rui (parse-rui ,rui))
+ ,rui))
+
(defmacro ensure-tui-integer (tui)
`(if (stringp ,tui)
(setq ,tui (parse-tui ,tui))
(ensure-cui-integer cui)
(unless cui (return-from find-ucon-cui nil))
- (let ((tuple (car (mutex-sql-query
+ (let ((tuple (car (mutex-sql-query
(format nil
"SELECT kcuilrl,str FROM MRCONSO WHERE CUI=~D AND KPFENG=1~A"
cui (if srl (format nil " AND SRL<=~D" srl) ""))))))
"Find preferred string for a cui"
(ensure-cui-integer cui)
(or
- (collect-umlisp-query (mrconso (kpfstr) srl cui cui :distinct t
- :filter " KPFENG=1" :single t))
- (collect-umlisp-query (mrconso (kpfstr) srl cui cui :distinct t
- :single t))))
+ (collect-umlisp-query (mrconso (str) srl cui cui :distinct t
+ :filter " KPFENG=1" :single t)
+ str)
+ (collect-umlisp-query (mrconso (str) srl cui cui :distinct t
+ :single t)
+ str)))
(defun find-ucon-lui (lui &key (srl *current-srl*))
"Find list of ucon for lui"
(defun find-ucon-aui (aui &key (srl *current-srl*))
"Find list of ucon for aui"
- (ensure-sui-integer aui)
+ (ensure-aui-integer aui)
(collect-umlisp-query (mrconso (cui kcuilrl) srl aui aui :distinct t)
(make-instance 'ucon :cui (ensure-integer cui) :pfstr (find-pfstr-cui cui)
:lrl (ensure-integer kcuilrl))))
(defun find-udoc-key (key)
"Return list of abbreviation documentation for a key"
(collect-umlisp-query (mrdoc (value type expl) nil dockey key)
- (make-instance 'udoc :key key :value value :type type :expl expl)))
+ (make-instance 'udoc :dockey key :dvalue value :dtype type :expl expl)))
(defun find-udoc-value (value)
"Return abbreviation documentation"
(collect-umlisp-query (mrdoc (dockey type expl) nil value value)
- (make-instance 'udoc :key dockey :value value :type type :expl expl)))
+ (make-instance 'udoc :dockey dockey :dvalue value :dtype type :expl expl)))
-(defun find-udoc-key-value (key value)
- (let ((tuple (car (mutex-sql-query
- (format nil "SELECT TYPE,EXPL FROM MRDOC WHERE DOCKEY='~A' AND VALUE='~A'"
- key value)))))
- (when tuple
- (make-instance 'udoc :key key :value value :type (first tuple) :expl (second tuple)))))
+(defun find-udoc-key-value (dockey value)
+ (collect-umlisp-query (mrdoc (type expl) nil dockey dockey :filter (format nil "VALUE='~A'" value))
+ (make-instance 'udoc :dockey dockey :dvalue value :dtype type :expl expl)))
(defun find-udoc-all ()
"Return all abbreviation documentation"
(collect-umlisp-query (mrdoc (dockey value type expl) nil nil nil)
- (make-instance 'udoc :key dockey :value value :type type :expl expl)))
+ (make-instance 'udoc :dockey dockey :dvalue value :dtype type :expl expl)))
(defun find-usty-cui (cui &key (srl *current-srl*))
"Return a list of usty for cui"
srl cui1 cui :lrl "KSRL")
(make-instance 'urel :cui1 cui :aui1 (ensure-integer aui1) :stype1 stype1 :rel rel
:cui2 (ensure-integer cui2) :aui2 (ensure-integer aui2) :stype2 stype2
- :rui rui :srui srui :rela rela :sab sab :sl sl :rg rg :dir dir
+ :rui (ensure-integer rui) :srui srui :rela rela :sab sab :sl sl :rg rg :dir dir
+ :suppress suppress :cvf cvf :pfstr2 (find-pfstr-cui cui2))))
+
+(defun find-urel-rui (rui &key (srl *current-srl*))
+ "Return the urel for a rui"
+ (ensure-rui-integer rui)
+ (collect-umlisp-query (mrrel (aui1 rel stype1 cui1 cui2 aui2 stype2 rela rui srui sab sl rg dir suppress cvf)
+ srl rui rui :lrl "KSRL" :single t)
+ (make-instance 'urel :cui1 cui1 :aui1 (ensure-integer aui1) :stype1 stype1 :rel rel
+ :cui2 (ensure-integer cui2) :aui2 (ensure-integer aui2) :stype2 stype2
+ :rui (ensure-integer rui) :srui srui :rela rela :sab sab :sl sl :rg rg :dir dir
:suppress suppress :cvf cvf :pfstr2 (find-pfstr-cui cui2))))
(defun find-cui2-urel-cui (cui &key (srl *current-srl*))
(ensure-cui-integer cui2)
(collect-umlisp-query (mrrel (rel cui1 aui1 stype1 aui2 stype2 rela rui srui sab sl rg dir suppress cvf)
srl cui2 cui2 :lrl "KSRL")
- (make-instance 'urel :cui2 cui2 :rel rel :aui2 (ensure-integer aui2) :stype2 stype2 :rui rui :srui srui
- :stype1 stype1 :cui1 (ensure-integer cui1) :aui1 (ensure-integer aui1)
+ (make-instance 'urel :cui2 cui2 :rel rel :aui2 (ensure-integer aui2)
+ :stype2 stype2 :rui (ensure-integer rui) :srui srui
+ :stype1 stype1 :cui1 (ensure-integer cui1)
+ :aui1 (ensure-integer aui1)
:rela rela :sab sab :sl sl :rg rg :dir dir :suppress suppress :cvf cvf
:pfstr2 (find-pfstr-cui cui2))))
(defun find-uso-cuisui (cui sui &key (srl *current-srl*))
(ensure-sui-integer sui)
(ensure-cui-integer cui)
- (collect-umlisp-query (mrconso (aui sab code srl tty saui sdui scui lat str) srl kcuisui
- (make-cuisui cui sui) :lrl srl)
+ (collect-umlisp-query (mrconso (aui sab code srl tty saui sdui scui lat str)
+ srl kcuisui (make-cuisui cui sui) :lrl srl)
(make-instance 'uso :aui aui :sab sab :code code :srl srl :tty tty
:cui cui :sui sui :saui saui :sdui sdui :scui scui
:lat lat :str str)))
(defun find-uso-cui (cui &key (srl *current-srl*) (english-only nil) limit)
(ensure-cui-integer cui)
- (collect-umlisp-query (mrconso (aui sab code srl tty saui sdui scui lat str)
+ (collect-umlisp-query (mrconso (aui sab code srl tty saui sdui scui lat str sui)
srl cui cui :lrl srl :limit limit
:filter (when english-only "LAT='ENG'"))
(make-instance 'uso :aui aui :sab sab :code code :srl srl :tty tty
(find-usty-tui tui)))
(defun find-usab-all ()
- "Find usab for a key"
+ "Return all usab objects"
(collect-umlisp-query (mrsab (vcui rcui vsab rsab son sf sver vstart vend imeta
rmeta slc scc srl tfr cfr cxty ttyl atnl lat
cenc curver sabin ssn scit) nil nil nil)