doc/ctsim.tex

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   2 \usepackage{graphicx}
   3 \usepackage{texhelp}
   4 \usepackage{fancyhea}
   5 \usepackage{mysober}
   6 \usepackage{mytitle}
   7 \usepackage{verbatim}
   8 \usepackage{makeidx}
   9 %\usepackage{times}
  10 \usepackage{hyperref}
  11 \input{psbox.tex}
  12
  13 \setlength{\textheight}{9in}
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  19
  20 \latexonly{\includeonly{ctsim-concepts,ctsim-install,ctsim-gui,ctsim-textui,ctsim-web,ctsim-appendix}}
  21 \hyphenation{poly-gon-al}
  22
  23 \newcommand{\ctsim}{\texttt{CTSim}}
  24 \newcommand{\ctsimtext}{\texttt{CTSimText}}
  25 \newcommand{\usage}{\textbf{Usage}\par}
  26
  27 \newcommand{\commandref}[2]{\helpref{{\tt $\backslash$#1}}{#2}}%
  28 \newcommand{\commandrefn}[2]{\helprefn{{\tt $\backslash$#1}}{#2}\index{#1}}%
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  31 \newcommand{\inioption}[1]{{\bf {\tt #1}}\index{#1}}%
  32
  33 \newcommand{\manvernum}[0]{0.31}
  34 \newcommand{\manver}[0]{v\manvernum}
  35 \newcommand{\mandate}[0]{February 12, 2001}
  36 \newcommand{\ctsimfooter}{\setfooter{\thepage}{}{}{\small Manual \manver}{\small \mandate}{\thepage}}
  37 \newcommand{\doublehyphen}[1]{-\,-\texttt{#1}}
  38 \newcommand{\ctsimvernum}[0]{3.0.0beta1}
  39 \newcommand{\ctsimver}[0]{CTSim \ctsimvernum}
  40 \newcommand{\ctsimheadtitle}{\ctsimver Manual}
  41
  42 \latexignore{\newcommand{\sqrt}[2]{sqrt(#2)}}
  43
  44 \parskip=10pt%
  45 \parindent=0pt%
  46 %\backgroundcolour{255;255;255}\textcolour{0;0;0}% Has an effect in HTML only
  47 \title{CTSim 3.0 User Manual}%
  48 \author{Kevin Rosenberg, M.D.}%
  49 \date{February 9, 2001}%
  50 \makeindex%
  51
  52 \begin{document}%
  53 \maketitle%
  54 \pagestyle{fancyplain}%
  55 \pagenumbering{roman}%
  56
  57 \setheader{{\it CONTENTS}}{}{}{\ctsimheadtitle}{}{{\it CONTENTS}}%
  58 \ctsimfooter
  59 \parskip=2pt
  60 \tableofcontents%
  61
  62 \parskip=10pt
  63 \chapter*{Copyright notice}%
  64 \setheader{{\it COPYRIGHT}}{}{}{\ctsimheadtitle}{}{{\it COPYRIGHT}}%
  65 \setfooter{\thepage}{}{}{}{\manver}{\thepage}%
  66
  67 Copyright (c) 1983-2001 Kevin Rosenberg, M.D.
  68
  69 Permission to use, copy, modify, and distribute this software and its
  70 documentation for any purpose is hereby granted without fee, provided that the
  71 above copyright notice, author statement and this permission notice appear in
  72 all copies of this software and related documentation.
  73
  74 THE SOFTWARE IS PROVIDED ``AS-IS'' AND WITHOUT WARRANTY OF ANY KIND, EXPRESS,
  75 IMPLIED OR OTHERWISE, INCLUDING WITHOUT LIMITATION, ANY WARRANTY OF
  76 MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE.
  77
  78 IN NO EVENT SHALL KEVIN ROSENBERG BE LIABLE FOR ANY
  79 SPECIAL, INCIDENTAL, INDIRECT OR CONSEQUENTIAL DAMAGES OF ANY KIND, OR
  80 ANY DAMAGES WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS,
  81 WHETHER OR NOT ADVISED OF THE POSSIBILITY OF DAMAGE, AND ON ANY THEORY
  82 OF LIABILITY, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
  83 PERFORMANCE OF THIS SOFTWARE.
  84
  85 \chapter{Introduction}\label{introduction}
  86 \pagenumbering{arabic}
  87 \setheader{{\it CHAPTER \thechapter}}{}{}{\ctsimheadtitle}{}{{\it CHAPTER \thechapter}}%
  88 \ctsimfooter
  89
  90
  91 \centerline{\image{3cm;3cm}{logo-huge.eps}}
  92 Computed Tomography is a technique for estimating the interior of an
  93 object from
  94 measurement of radiation collected around the object. This
  95 radiation can be either projected through or emitted from the
  96 object. \ctsim\ simulates the process of projecting X-rays
  97 through a phantom object. \ctsim\ can then reconstruct the
  98 interior of the object from the projections collected around the
  99 phantom object.
 100
 101 This manual begins with an introduction into the concepts of
 102 \ctsim. The graphical, \helprefn{ctsim}{ctsim}, and
 103 command-line, \helprefn{ctsimtext}{ctsimtext}, shells are then
 104 presented. Finally, the web-based
 105 \helprefn{interface}{webinterface} and
 106 \helprefn{installation}{installation} are discussed.
 107
 108 I hope that you enjoy \ctsim!
 109
 110 \include{ctsim-concepts}
 111
 112 \include{ctsim-gui}
 113
 114 \include{ctsim-textui}
 115
 116 \include{ctsim-web}
 117
 118 \include{ctsim-install}
 119
 120 \include{ctsim-appendix}
 121
 122 \newpage
 123
 124 \bibliographystyle{plain}
 125 \bibliography{ctsim}
 126 \addcontentsline{toc}{chapter}{Bibliography}
 127 \setheader{{\it REFERENCES}}{}{}{\ctsimheadtitle}{}{{\it REFERENCES}}
 128 \ctsimfooter
 129
 130 \addcontentsline{toc}{chapter}{Index}
 131 \setheader{{\it INDEX}}{}{}{\ctsimheadtitle}{}{{\it INDEX}} %
 132 \ctsimfooter
 133 \printindex
 134
 135 \end{document}