1 ;;;; -*- Mode: Lisp; Syntax: ANSI-Common-Lisp; Base: 10; Package: umlisp -*-
2 ;;;; *************************************************************************
3 ;;;; FILE IDENTIFICATION
5 ;;;; Name: sql-classes.lisp
6 ;;;; Purpose: Routines for reading UMLS objects from SQL database
7 ;;;; Author: Kevin M. Rosenberg
8 ;;;; Date Started: Apr 2000
10 ;;;; $Id: sql-classes.lisp,v 1.69 2003/05/04 04:41:07 kevin Exp $
12 ;;;; This file, part of UMLisp, is
13 ;;;; Copyright (c) 2000-2002 by Kevin M. Rosenberg, M.D.
15 ;;;; UMLisp users are granted the rights to distribute and use this software
16 ;;;; as governed by the terms of the GNU General Public License.
17 ;;;; *************************************************************************
20 (declaim (optimize (compilation-speed 0) (debug 3)))
23 (defvar *current-srl* nil)
26 (defun current-srl! (srl)
27 (setq *current-srl* srl))
29 (defmacro query-string (table fields &optional srl where-name where-value
30 &key (lrl "KCUILRL") single distinct order like)
31 (let* ((%%fields (format nil "select ~A~{~:@(~A~)~^,~} from ~:@(~A~)"
32 (if distinct "distinct " "") fields table))
33 (%%order (if order (format nil " order by ~{~:@(~A~) ~(~A~)~^,~}" order) ""))
34 (%%lrl (format nil " and ~:@(~A~)<=" lrl))
35 (%%where (when where-name
36 (format nil " where ~:@(~A~)~A" where-name
37 (if like " like " "")))))
41 ,@(when %%where (list %%where))
43 `((typecase ,where-value
45 (concatenate 'string "=" (write-to-string ,where-value)))
49 (format nil ,(if like "'%~A%'" "='~A'") ,where-value)))))
50 (if ,srl (concatenate 'string ,%%lrl (write-to-string ,srl)) "")
51 ,@(when %%order (list %%order))
52 ,@(when single (list " limit 1")))))
54 (defun query-string-eval (table fields &optional srl where-name where-value
55 &key (lrl "KCUILRL") single distinct order like)
58 (format nil "select ~A~{~:@(~A~)~^,~} from ~:@(~A~)"
59 (if distinct "distinct " "") fields table)
63 (number " where ~A=~D")
64 (null " where ~A is null")
67 " where ~A like '%~A%'"
69 where-name where-value)
71 (if srl (format nil " and ~:@(~A~) <= ~D" lrl srl) "")
72 (if order (format nil " order by ~{~:@(~A~) ~(~A~)~^,~}" order) "")
73 (if single " limit 1" "")))
76 (defmacro umlisp-query (table fields srl where-name where-value
77 &key (lrl "KCUILRL") single distinct order like)
78 "Query the UMLisp database. Return a list of umlisp objects whose name
79 is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS"
81 (query-string ,table ,fields ,srl ,where-name ,where-value
82 :lrl ,lrl :single ,single :distinct ,distinct :order ,order :like ,like)))
84 (defmacro umlisp-query-eval (table fields srl where-name where-value
85 &key (lrl "KCUILRL") single distinct order like)
86 "Query the UMLisp database. Return a list of umlisp objects whose name
87 is OBJNAME from TABLE where WHERE-NAME field = WHERE-VALUE with FIELDS"
89 (query-string-eval ,table ,fields ,srl ,where-name ,where-value
90 :lrl ,lrl :single ,single :distinct ,distinct :order ,order :like ,like)))
92 ;; only WHERE-VALUE and SRL are evaluated
93 (defmacro with-umlisp-query ((table fields srl where-name where-value
94 &key (lrl "KCUILRL") distinct single
97 (let ((value (gensym)))
99 `(let* ((,value ,where-value)
100 (tuple (car (umlisp-query ,table ,fields ,srl ,where-name ,value
101 :lrl ,lrl :single ,single
102 :distinct ,distinct :order ,order
104 ,@(unless where-name `((declare (ignore ,value))))
106 (destructuring-bind ,fields tuple
108 `(let ((,value ,where-value))
109 ,@(unless where-name `((declare (ignore ,value))))
111 (umlisp-query ,table ,fields ,srl ,where-name ,value
112 :lrl ,lrl :single ,single :distinct ,distinct
113 :order ,order :like ,like)
114 collect (destructuring-bind ,fields tuple
117 (defmacro with-umlisp-query-eval ((table fields srl where-name where-value
118 &key (lrl "KCUILRL") distinct single
121 (let ((value (gensym))
122 (eval-fields (cadr fields)))
124 `(let* ((,value ,where-value)
125 (tuple (car (umlisp-query-eval ,table ,fields ,srl ,where-name ,value
126 :lrl ,lrl :single ,single
127 :distinct ,distinct :order ,order
130 (destructuring-bind ,eval-fields tuple
132 `(let ((,value ,where-value))
134 (umlisp-query-eval ,table ,fields ,srl ,where-name ,value
135 :lrl ,lrl :single ,single :distinct ,distinct
136 :order ,order :like ,like)
137 collect (destructuring-bind ,eval-fields tuple
141 ;;; Read from SQL database
143 (defun find-ucon-cui (cui &key (srl *current-srl*))
144 "Find ucon for a cui"
145 (with-umlisp-query (mrcon (kpfstr kcuilrl) srl cui (parse-cui cui) :single t)
146 (make-instance 'ucon :cui (parse-cui cui) :pfstr kpfstr
147 :lrl (ensure-integer kcuilrl))))
149 (defun find-ucon-cui-sans-pfstr (cui &key (srl *current-srl*))
150 "Find ucon for a cui"
151 (with-umlisp-query (mrcon (kcuilrl) srl cui (parse-cui cui) :single t)
152 (make-instance 'ucon :cui (parse-cui cui) :lrl (ensure-integer kcuilrl)
155 (defun find-pfstr-cui (cui &key (srl *current-srl*))
156 "Find preferred string for a cui"
157 (with-umlisp-query (mrcon (kpfstr) srl cui (parse-cui cui) :single t)
160 (defun find-ucon-lui (lui &key (srl *current-srl*))
161 "Find list of ucon for lui"
162 (with-umlisp-query (mrcon (cui kpfstr kcuilrl) srl lui (parse-lui lui) :distinct t)
163 (make-instance 'ucon :cui (ensure-integer cui) :pfstr kpfstr
164 :lrl (ensure-integer kcuilrl))))
166 (defun find-ucon-sui (sui &key (srl *current-srl*))
167 "Find list of ucon for sui"
168 (with-umlisp-query (mrcon (cui kpfstr kcuilrl) srl sui (parse-sui sui) :distinct t)
169 (make-instance 'ucon :cui (ensure-integer cui)
171 :lrl (ensure-integer kcuilrl))))
173 (defun find-ucon-cuisui (cui sui &key (srl *current-srl*))
174 "Find ucon for cui/sui"
176 (with-umlisp-query (mrcon (cui kpfstr kcuilrl) srl kcuisui
177 (make-cuisui (parse-cui cui) (parse-sui sui)))
178 (make-instance 'ucon :cui (ensure-integer cui)
180 :lrl (ensure-integer kcuilrl)))))
182 (defun find-ucon-str (str &key (srl *current-srl*))
183 "Find ucon that are exact match for str"
184 (with-umlisp-query (mrcon (cui kpfstr kcuilrl) srl str str :distinct t)
185 (make-instance 'ucon :cui (ensure-integer cui) :pfstr kpfstr
186 :lrl (ensure-integer kcuilrl))))
188 (defun find-ucon-all (&key (srl *current-srl*))
189 "Return list of all ucon's"
190 (with-sql-connection (db)
193 #'(lambda (cui pfstr cuilrl)
194 (make-instance 'ucon :cui (ensure-integer cui)
196 :lrl (ensure-integer cuilrl)))
197 (query-string mrcon (cui kpfstr kcuilrl) srl nil nil
198 :order (cui asc) :distinct t)
201 (defun find-ucon-all2 (&key (srl *current-srl*))
202 "Return list of all ucon's"
203 (with-umlisp-query (mrcon (cui kpfstr kcuilrl) srl nil nil :order (cui asc) :distinct t)
204 (make-instance 'ucon :cui (ensure-integer cui)
206 :lrl (ensure-integer kcuilrl))))
208 (defun map-ucon-all (fn &key (srl *current-srl*))
209 "Map a function over all ucon's"
210 (with-sql-connection (db)
213 #'(lambda (cui pfstr cuilrl)
215 (make-instance 'ucon :cui (ensure-integer cui)
217 :lrl (ensure-integer cuilrl))))
218 (query-string mrcon (cui kpfstr kcuilrl) srl nil nil :order (cui asc) :distinct t)
222 (defun find-udef-cui (cui &key (srl *current-srl*))
223 "Return a list of udefs for cui"
224 (with-umlisp-query (mrdef (sab def) srl cui (parse-cui cui) :lrl "KSRL")
225 (make-instance 'udef :sab sab :def def)))
227 (defun find-usty-cui (cui &key (srl *current-srl*))
228 "Return a list of usty for cui"
229 (with-umlisp-query (mrsty (tui sty) srl cui (parse-cui cui) :lrl "KLRL")
230 (make-instance 'usty :tui (ensure-integer tui) :sty sty)))
232 (defun find-usty-word (word &key (srl *current-srl*))
233 "Return a list of usty that match word"
234 (with-umlisp-query (mrsty (tui sty) srl sty word :lrl klrl :like t :distinct t)
235 (make-instance 'usty :tui (ensure-integer tui) :sty sty)))
237 (defun find-urel-cui (cui &key (srl *current-srl*))
238 "Return a list of urel for cui"
239 (with-umlisp-query (mrrel (rel cui2 rela sab sl mg kpfstr2) srl cui1 (parse-cui cui) :lrl "KSRL")
240 (make-instance 'urel :cui1 (parse-cui cui) :rel rel :cui2 (ensure-integer cui2)
241 :rela rela :sab sab :sl sl :mg mg :pfstr2 kpfstr2)))
243 (defun find-urel-cui2 (cui2 &key (srl *current-srl*))
244 "Return a list of urel for cui2"
245 (with-umlisp-query (mrrel (rel cui1 rela sab sl mg kpfstr2) srl cui2 (parse-cui cui2) :lrl "KSRL")
246 (make-instance 'urel :cui2 (parse-cui cui2) :rel rel :cui1 (ensure-integer cui1)
247 :rela rela :sab sab :sl sl :mg mg :pfstr2 kpfstr2)))
249 (defun find-ucon-rel-cui2 (cui2 &key (srl *current-srl*))
251 #'(lambda (cui) (find-ucon-cui cui :srl srl))
252 (remove-duplicates (mapcar #'cui1 (find-urel-cui2 cui2 :srl srl)))))
254 (defun find-ucoc-cui (cui &key (srl *current-srl*))
255 "Return a list of ucoc for cui"
256 (with-umlisp-query (mrcoc (cui2 soc cot cof coa kpfstr2) srl cui1 (parse-cui cui)
257 :lrl "KSRL" :order (cof asc))
258 (setq cui2 (ensure-integer cui2))
259 (when (zerop cui2) (setq cui2 nil))
260 (make-instance 'ucoc :cui1 (parse-cui cui) :cui2 (ensure-integer cui2) :soc soc
261 :cot cot :cof (ensure-integer cof) :coa coa :pfstr2 kpfstr2)))
263 (defun find-ucoc-cui2 (cui2 &key (srl *current-srl*))
264 "Return a list of ucoc for cui2"
265 (with-umlisp-query (mrcoc (cui1 soc cot cof coa kpfstr2) srl cui2 (parse-cui cui2)
266 :lrl "KSRL" :order (cof asc))
267 (setq cui2 (ensure-integer cui2))
268 (when (zerop cui2) (setq cui2 nil))
269 (make-instance 'ucoc :cui1 (ensure-integer cui1) :cui2 (parse-cui cui2) :soc soc
270 :cot cot :cof (ensure-integer cof) :coa coa :pfstr2 kpfstr2)))
272 (defun find-ucon-coc-cui2 (cui2 &key (srl *current-srl*))
273 "List of ucon with co-occurance cui2"
275 #'(lambda (cui) (find-ucon-cui cui :srl srl))
276 (remove-duplicates (mapcar #'cui1 (find-ucoc-cui2 cui2 :srl srl)))))
278 (defun find-ulo-cui (cui &key (srl *current-srl*))
279 "Return a list of ulo for cui"
280 (with-umlisp-query (mrlo (isn fr un sui sna soui) srl cui (parse-cui cui) :lrl "KLRL")
281 (make-instance 'ulo :isn isn :fr (ensure-integer fr) :un un :sui (ensure-integer sui)
282 :sna sna :soui soui)))
284 (defgeneric suistr (lo))
285 (defmethod suistr ((lo ulo))
286 "Return the string for a ulo object"
287 (find-string-sui (sui lo)))
289 (defun find-uatx-cui (cui &key (srl *current-srl*))
290 "Return a list of uatx for cui"
291 (with-umlisp-query (mratx (sab rel atx) srl cui (parse-cui cui) :lrl ksrl)
292 (make-instance 'uatx :sab sab :rel rel :atx atx)))
295 (defun find-uterm-cui (cui &key (srl *current-srl*))
296 "Return a list of uterm for cui"
297 (with-umlisp-query (mrcon (lui lat ts kluilrl) srl cui (parse-cui cui) :lrl kluilrl
299 (make-instance 'uterm :lui (ensure-integer lui) :cui (parse-cui cui)
300 :lat lat :ts ts :lrl (ensure-integer kluilrl))))
302 (defun find-uterm-lui (lui &key (srl *current-srl*))
303 "Return a list of uterm for lui"
304 (with-umlisp-query (mrcon (cui lat ts kluilrl) srl lui (parse-lui lui)
305 :lrl kluilrl :distinct t)
306 (make-instance 'uterm :cui (ensure-integer cui) :lui (parse-lui lui)
307 :lat lat :ts ts :lrl (ensure-integer kluilrl))))
309 (defun find-uterm-cuilui (cui lui &key (srl *current-srl*))
310 "Return single uterm for cui/lui"
311 (with-umlisp-query (mrcon (lat ts kluilrl) srl kcuilui
312 (make-cuilui (parse-cui cui) (parse-lui lui))
313 :lrl kluilrl :single t)
314 (make-instance 'uterm :cui cui :lui lui :lat lat :ts ts
315 :lrl (ensure-integer kluilrl))))
317 (defun find-ustr-cuilui (cui lui &key (srl *current-srl*))
318 "Return a list of ustr for cui/lui"
319 (with-umlisp-query (mrcon (sui stt str lrl) srl kcuilui (make-cuilui cui lui) :lrl lrl)
320 (make-instance 'ustr :sui (ensure-integer sui) :cui cui :lui lui
321 :cuisui (make-cuisui cui sui) :stt stt :str str
322 :lrl (ensure-integer lrl))))
324 (defun find-ustr-cuisui (cui sui &key (srl *current-srl*))
325 "Return the single ustr for cuisui"
326 (with-umlisp-query (mrcon (lui stt str lrl) srl kcuisui (make-cuisui cui sui) :lrl lrl :single t)
327 (make-instance 'ustr :sui sui :cui cui :cuisui (make-cuisui cui sui)
328 :lui (ensure-integer lui) :stt stt :str str :lrl (ensure-integer lrl))))
330 (defun find-ustr-sui (sui &key (srl *current-srl*))
331 "Return the list of ustr for sui"
332 (with-umlisp-query (mrcon (cui lui stt str lrl) srl sui (parse-sui sui) :lrl lrl)
333 (make-instance 'ustr :sui sui :cui cui :stt stt :str str
334 :cuisui (make-cuisui (ensure-integer cui) (parse-sui sui))
335 :lui (ensure-integer lui) :lrl (ensure-integer lrl))))
337 (defun find-ustr-sab (sab &key (srl *current-srl*))
338 "Return the list of ustr for sab"
339 (with-umlisp-query (mrso (kcuisui) srl sab sab :lrl srl)
340 (let ((cuisui (ensure-integer kcuisui)))
341 (apply #'find-ustr-cuisui
343 (multiple-value-list (decompose-cuisui cuisui)) (list :srl srl))))))
345 (defun find-ustr-all (&key (srl *current-srl*))
346 "Return list of all ustr's"
347 (with-sql-connection (db)
350 #'(lambda (cui lui sui stt lrl pfstr)
351 (make-instance 'ustr :cui (ensure-integer cui) :lui (ensure-integer lui)
352 :sui (ensure-integer sui) :stt stt :str pfstr
353 :cuisui (make-cuisui (ensure-integer cui) (ensure-integer sui))
354 :lrl (ensure-integer lrl)))
355 (query-string mrcon (cui lui sui stt lrl kpfstr) srl nil nil :lrl lrl :distinct t
359 (defun find-string-sui (sui &key (srl *current-srl*))
360 "Return the string associated with sui"
361 (with-umlisp-query (mrcon (str) srl sui sui :lrl lrl :single t)
364 (defun find-uso-cuisui (cui sui &key (srl *current-srl*))
365 (with-umlisp-query (mrso (sab code srl tty) srl kcuisui (make-cuisui cui sui) :lrl srl)
366 (make-instance 'uso :sab sab :code code :srl srl :tty tty)))
368 (defun find-ucxt-cuisui (cui sui &key (srl *current-srl*))
369 (with-umlisp-query (mrcxt (sab code cxn cxl rnk cxs cui2 hcd rela xc) srl kcuisui
370 (make-cuisui cui sui) :lrl ksrl)
371 (make-instance 'ucxt :sab sab :code code
372 :cxn (ensure-integer cxn) :cxl cxl :cxs cxs :hcd hcd :rela rela :xc xc
373 :rnk (ensure-integer rnk) :cui2 (ensure-integer cui2))))
375 (defun find-usat-ui (cui &optional (lui nil) (sui nil) &key (srl *current-srl*))
376 (let ((ls (format nil "select CODE,ATN,SAB,ATV from MRSAT where ")))
378 (sui (string-append ls (format nil "KCUISUI=~d" (make-cuisui cui sui))))
379 (lui (string-append ls (format nil "KCUILUI=~d and sui=0" (make-cuilui cui lui))))
380 (t (string-append ls (format nil "cui=~d and lui=0 and sui=0" cui))))
382 (string-append ls (format nil " and KSRL <= ~d" srl)))
383 (loop for tuple in (mutex-sql-query ls) collect
384 (destructuring-bind (code atn sab atv) tuple
385 (make-instance 'usat :code code :atn atn :sab sab :atv atv)))))
387 (defun find-usty-tui (tui)
389 (with-umlisp-query (mrsty (sty) nil tui (parse-tui tui) :single t)
390 (make-instance 'usty :tui (parse-tui tui) :sty sty)))
392 (defun find-usty-sty (sty)
393 "Find usty for a sty"
394 (with-umlisp-query (mrsty (tui) nil sty sty :single t)
395 (make-instance 'usty :tui (ensure-integer tui) :sty sty)))
397 (defun find-usty-all ()
398 "Return list of usty's for all semantic types"
399 (with-umlisp-query (mrsty (tui) nil nil nil :distinct t)
400 (find-usty-tui tui)))
402 (defun find-usab-all ()
403 "Find usab for a key"
404 (with-umlisp-query (mrsab (vcui rcui vsab rsab son sf sver mstart mend imeta rmeta slc
405 scc srl tfr cfr cxty ttyl atnl lat cenc curver sabin)
407 (make-instance 'usab :vcui (ensure-integer vcui)
408 :rcui (ensure-integer rcui) :vsab vsab :rsab rsab :son son :sf sf
409 :sver sver :mstart mstart :mend mend :imeta imeta :rmeta rmeta
410 :slc slc :scc scc :srl (ensure-integer srl) :tfr (ensure-integer tfr)
411 :cfr (ensure-integer cfr) :cxty cxty :ttyl ttyl :atnl atnl :lat lat
412 :cenc cenc :curver curver :sabin sabin)))
414 (defun find-usab-by-key (key-name key)
415 "Find usab for a key"
416 (with-umlisp-query-eval ('mrsab '(vcui rcui vsab rsab son sf sver mstart mend imeta
417 rmeta slc scc srl tfr cfr cxty ttyl atnl lat cenc
418 curver sabin) nil key-name key :single t)
419 (make-instance 'usab :vcui (ensure-integer vcui)
420 :rcui (ensure-integer rcui) :vsab vsab :rsab rsab :son son :sf sf
421 :sver sver :mstart mstart :mend mend :imeta imeta :rmeta rmeta
422 :slc slc :scc scc :srl (ensure-integer srl) :tfr (ensure-integer tfr)
423 :cfr (ensure-integer cfr) :cxty cxty :ttyl ttyl :atnl atnl :lat lat
424 :cenc cenc :curver curver :sabin sabin)))
426 (defun find-usab-rsab (rsab)
428 (find-usab-by-key 'rsab rsab))
430 (defun find-usab-vsab (vsab)
432 (find-usab-by-key 'vsab vsab))
434 (defun find-cui-max ()
435 (ensure-integer (caar (mutex-sql-query "select max(CUI) from MRCON"))))
437 ;;;; Cross table find functions
439 (defun find-ucon-tui (tui &key (srl *current-srl*))
440 "Find list of ucon for tui"
441 (with-umlisp-query (mrsty (cui) srl tui (parse-tui tui) :lrl klrl :order (cui asc))
442 (find-ucon-cui (ensure-integer cui) :srl srl)))
444 (defun find-ucon-word (word &key (srl *current-srl*) (like nil))
445 "Return list of ucons that match word. Optionally, use SQL's LIKE syntax"
446 (with-umlisp-query-eval ('mrxw_eng '(cui) srl 'wd word :like like :distinct t
447 :lrl 'klrl :order '(cui asc))
448 (find-ucon-cui cui :srl srl)))
450 (defun find-ucon-normalized-word (word &key (srl *current-srl*) (like nil))
451 "Return list of ucons that match word, optionally use SQL's LIKE syntax"
452 (with-umlisp-query-eval ('mrxnw_eng '(cui) srl 'nwd word :like like :distinct t
453 :lrl 'klrl :order '(cui asc))
454 (find-ucon-cui cui :srl srl)))
456 (defun find-ustr-word (word &key (srl *current-srl*))
457 "Return list of ustrs that match word"
458 (with-umlisp-query (mrxw_eng (cui sui) srl wd word :lrl klrl
459 :order (cui asc sui asc))
460 (find-ustr-cuisui (ensure-integer cui) (ensure-integer sui) :srl srl)))
462 (defun find-ustr-normalized-word (word &key (srl *current-srl*))
463 "Return list of ustrs that match word"
464 (with-umlisp-query (mrxnw_eng (cui sui) srl nwd word :lrl klrl
465 :order (cui asc sui asc))
466 (find-ustr-cuisui (ensure-integer cui) (ensure-integer sui) :srl srl)))
470 (defun find-usrl-all ()
471 (with-umlisp-query (usrl (sab srl) nil nil nil :order (sab asc))
472 (make-instance 'usrl :sab sab :srl (ensure-integer srl))))
474 ;;; Multiword lookup and score functions
476 (defun find-ucon-multiword (str &key (srl *current-srl*))
477 "Return sorted list of ucon's that match a multiword string"
478 (let* ((words (delimited-string-to-list str #\space))
481 (setq ucons (append ucons (find-ucon-word word :srl srl))))
482 (sort-score-ucon-str str (delete-duplicates ucons :test #'eql :key #'cui))))
484 (defun find-ustr-multiword (str &key (srl *current-srl*))
485 "Return sorted list of ustr's that match a multiword string"
486 (let* ((words (delimited-string-to-list str #\space))
489 (setq ustrs (append ustrs (find-ustr-word word :srl srl))))
490 (sort-score-ustr-str str (delete-duplicates ustrs :test #'eql :key #'cui))))
492 (defun sort-score-ucon-str (str ucons)
493 "Return list of sorted and scored ucons. Score by match of str to ucon-pfstr"
494 (sort-score-umlsclass-str ucons str #'pfstr))
496 (defun sort-score-ustr-str (str ustrs)
497 "Return list of sorted and scored ucons. Score by match of str to ucon-pfstr"
498 (sort-score-umlsclass-str ustrs str #'str))
500 (defun sort-score-umlsclass-str (objs str lookup-func)
501 "Sort a list of objects based on scoring to a string"
504 (push (list obj (score-multiword-match str (funcall lookup-func obj)))
506 (mapcar #'car (sort scored #'> :key #'cadr))))
508 (defun score-multiword-match (s1 s2)
509 "Score a match between two strings with s1 being reference string"
510 (let* ((word-list-1 (delimited-string-to-list s1 #\space))
511 (word-list-2 (delimited-string-to-list s2 #\space))
512 (n1 (length word-list-1))
513 (n2 (length word-list-2))
518 short-list long-list)
519 (declare (fixnum n1 n2 nshort nlong score unmatched))
524 (setq long-list word-list-1)
525 (setq short-list word-list-2))
529 (setq long-list word-list-2)
530 (setq short-list word-list-1)))
531 (decf score (- nlong nshort)) ;; reduce score for extra words
532 (dotimes (iword nshort)
533 (declare (fixnum iword))
534 (kmrcl:aif (position (nth iword short-list) long-list :test #'string-equal)
536 (incf score (- 10 (abs (- kmrcl::it iword))))
538 (decf score (* 2 unmatched))
542 ;;; LEX SQL functions
544 (defun find-lexterm-eui (eui)
545 (with-umlisp-query (lrwd (wrd) nil eui eui :single t)
546 (make-instance 'lexterm :eui eui :wrd wrd)))
548 (defun find-lexterm-word (wrd)
549 (with-umlisp-query (lrwd (eui) nil wrd wrd)
550 (make-instance 'lexterm :eui (ensure-integer eui)
551 :wrd (copy-seq wrd))))
553 ;; LEX SQL Read functions
555 (defun find-labr-eui (eui)
556 (with-umlisp-query (lrabr (bas abr eui2 bas2) nil eui eui)
557 (make-instance 'labr :eui eui :bas bas :abr abr :bas2 bas2
558 :eui2 (ensure-integer eui2))))
560 (defun find-labr-bas (bas)
561 (with-umlisp-query (labr (eui abr eui2 bas2) nil bas bas)
562 (make-instance 'labr :eui (ensure-integer eui) :abr abr :bas2 bas2
563 :bas (copy-seq bas) :eui2 (ensure-integer eui2))))
565 (defun find-lagr-eui (eui)
566 (with-umlisp-query (lragr (str sca agr cit bas) nil eui eui)
567 (make-instance 'lagr :eui eui :str str :sca sca :agr agr
570 (defun find-lcmp-eui (eui)
571 (with-umlisp-query (lrcmp (bas sca com) nil eui eui)
572 (make-instance 'lcmp :eui eui :bas bas :sca sca :com com)))
574 (defun find-lmod-eui (eui)
575 (with-umlisp-query (lrmod (bas sca psn_mod fea) nil eui eui)
576 (make-instance 'lmod :eui eui :bas bas :sca sca :psnmod psn_mod :fea fea)))
578 (defun find-lnom-eui (eui)
579 (with-umlisp-query (lrnom (bas sca eui2 bas2 sca2) nil eui eui)
580 (make-instance 'lnom :eui eui :bas bas :sca sca :bas2 bas2 :sca2 sca2
581 :eui2 (ensure-integer eui2))))
583 (defun find-lprn-eui (eui)
584 (with-umlisp-query (lrprn (bas num gnd cas pos qnt fea) nil eui eui)
585 (make-instance 'lprn :eui eui :bas bas :num num :gnd gnd
586 :cas cas :pos pos :qnt qnt :fea fea)))
588 (defun find-lprp-eui (eui)
589 (with-umlisp-query (lrprp (bas str sca fea) nil eui eui)
590 (make-instance 'lprp :eui eui :bas bas :str str :sca sca :fea fea)))
592 (defun find-lspl-eui (eui)
593 (with-umlisp-query (lrspl (spv bas) nil eui eui)
594 (make-instance 'lspl :eui eui :spv spv :bas bas)))
596 (defun find-ltrm-eui (eui)
597 (with-umlisp-query (lrtrm (bas gen) nil eui eui)
598 (make-instance 'ltrm :eui eui :bas bas :gen gen)))
600 (defun find-ltyp-eui (eui)
601 (with-umlisp-query (lrtyp (bas sca typ) nil eui eui)
602 (make-instance 'ltyp :eui eui :bas bas :sca sca :typ typ)))
604 (defun find-lwd-wrd (wrd)
605 (make-instance 'lwd :wrd
606 :euilist (with-umlisp-query (lrwd (eui) nil wrd wrd)
607 (ensure-integer eui))))
609 ;;; Semantic Network SQL access functions
611 (defun find-sdef-ui (ui)
612 (with-umlisp-query (srdef (rt sty_rl stn_rtn def ex un rh abr rin)
614 (make-instance 'sdef :rt rt :ui ui :styrl sty_rl :stnrtn stn_rtn
615 :def def :ex ex :un un :rh rh :abr abr :rin rin)))
617 (defun find-sstre1-ui (ui)
618 (with-umlisp-query (srstre1 (ui2 ui3) nil ui ui)
619 (make-instance 'sstre1 :ui ui :ui2 (ensure-integer ui2)
620 :ui3 (ensure-integer ui3))))
622 (defun find-sstre1-ui2 (ui2)
623 (with-umlisp-query (srstre1 (ui ui3) nil ui2 ui2)
624 (make-instance 'sstre1 :ui (ensure-integer ui) :ui2 ui2
625 :ui3 (ensure-integer ui3))))
627 (defun find-sstr-rl (rl)
628 (with-umlisp-query (srstre (sty_rl sty_rl2 ls) nil rl rl)
629 (make-instance 'sstr :rl rl :styrl sty_rl :styrl2 sty_rl2 :ls ls)))
631 (defun find-sstre2-sty (sty)
632 (with-umlisp-query (srstre2 (rl sty2) nil sty sty)
633 (make-instance 'sstre2 :sty (copy-seq sty) :rl rl :sty2 sty2)))
635 (defun find-sstr-styrl (styrl)
636 (with-umlisp-query (srstr (rl sty_rl2 ls) nil styrl styrl)
637 (make-instance 'sstr :styrl styrl :rl rl :styrl2 sty_rl2 :ls ls)))